BLASTX nr result

ID: Coptis24_contig00007659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007659
         (2048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518164.1| PREDICTED: eukaryotic peptide chain release ...   793   0.0  
ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release ...   791   0.0  
emb|CAN63440.1| hypothetical protein VITISV_020937 [Vitis vinifera]   791   0.0  
ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release ...   790   0.0  
ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release ...   789   0.0  

>ref|XP_003518164.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Glycine max]
          Length = 437

 Score =  793 bits (2049), Expect = 0.0
 Identities = 397/437 (90%), Positives = 415/437 (94%)
 Frame = -2

Query: 1960 MGDAQETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 1781
            M D+QE+DKN               ARGNGTSMISLIMPPRDQ+SRVTKMLGDE+GTASN
Sbjct: 1    MSDSQESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1780 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 1601
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPFKPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN 120

Query: 1600 ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 1421
            ASLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 1420 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQS 1241
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 1240 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFVQEKRLIGKYFEEISQDTG 1061
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELS+EIL+NVKF+QEKRLIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1060 KYVFGVDDTLKALEMGAVETLIVWENLDINRYVLKNTATSEIVIKHLNKEQEGNESNFRD 881
            KYVFGV+DTLKALEMGAVETLIVWENLDINRYVLKN  T EIVIKHLNKEQE N+SNFRD
Sbjct: 301  KYVFGVEDTLKALEMGAVETLIVWENLDINRYVLKNGITGEIVIKHLNKEQEANQSNFRD 360

Query: 880  PATSAELEVQEKLSLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDM 701
             ATSAELEVQEK+ LLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGG+LRYQLD+
Sbjct: 361  LATSAELEVQEKMPLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 700  RSFDELSDDGEVYDDSE 650
            RSFDELSDDGEVY+DS+
Sbjct: 421  RSFDELSDDGEVYEDSD 437


>ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Vitis
            vinifera]
          Length = 437

 Score =  791 bits (2042), Expect = 0.0
 Identities = 395/437 (90%), Positives = 413/437 (94%)
 Frame = -2

Query: 1960 MGDAQETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 1781
            M D  ETDKN               ARGNGTSMISLIMPPRDQ+SRVTKMLGDE+GTASN
Sbjct: 1    MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1780 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 1601
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1600 ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 1421
            ASLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 1420 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQS 1241
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 1240 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFVQEKRLIGKYFEEISQDTG 1061
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEIL+NVKF+QEKRLIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1060 KYVFGVDDTLKALEMGAVETLIVWENLDINRYVLKNTATSEIVIKHLNKEQEGNESNFRD 881
            KYVFGVDDTLKALEMGAVETLIVWENLDI+RYVLKN  T EIVIKHLNKEQE N+S+FRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDISRYVLKNNITGEIVIKHLNKEQESNQSHFRD 360

Query: 880  PATSAELEVQEKLSLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDM 701
             ATSAELEVQEK+SLLEWFANEYK+FGC+LEFVTNKSQEGSQFCRGFGGIGG+LRYQLDM
Sbjct: 361  TATSAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 700  RSFDELSDDGEVYDDSE 650
            RSFDE+SDDGE YDDS+
Sbjct: 421  RSFDEVSDDGENYDDSD 437


>emb|CAN63440.1| hypothetical protein VITISV_020937 [Vitis vinifera]
          Length = 437

 Score =  791 bits (2042), Expect = 0.0
 Identities = 395/437 (90%), Positives = 413/437 (94%)
 Frame = -2

Query: 1960 MGDAQETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 1781
            M D  ETDKN               ARGNGTSMISLIMPPRDQ+SRVTKMLGDE+GTASN
Sbjct: 1    MADGHETDKNIEIWNIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1780 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 1601
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1600 ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 1421
            ASLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 1420 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQS 1241
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 1240 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFVQEKRLIGKYFEEISQDTG 1061
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEIL+NVKF+QEKRLIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1060 KYVFGVDDTLKALEMGAVETLIVWENLDINRYVLKNTATSEIVIKHLNKEQEGNESNFRD 881
            KYVFGVDDTLKALEMGAVETLIVWENLDI+RYVLKN  T EIVIKHLNKEQE N+S+FRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDISRYVLKNNITGEIVIKHLNKEQESNQSHFRD 360

Query: 880  PATSAELEVQEKLSLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDM 701
             ATSAELEVQEK+SLLEWFANEYK+FGC+LEFVTNKSQEGSQFCRGFGGIGG+LRYQLDM
Sbjct: 361  TATSAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 700  RSFDELSDDGEVYDDSE 650
            RSFDE+SDDGE YDDS+
Sbjct: 421  RSFDEVSDDGENYDDSD 437


>ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Cucumis sativus] gi|449487371|ref|XP_004157593.1|
            PREDICTED: eukaryotic peptide chain release factor
            subunit 1-3-like [Cucumis sativus]
          Length = 436

 Score =  790 bits (2040), Expect = 0.0
 Identities = 396/437 (90%), Positives = 414/437 (94%)
 Frame = -2

Query: 1960 MGDAQETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 1781
            M DA ETDKN               ARGNGTSMISLIMPPRDQ+SRVTKMLGDE+GTASN
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1780 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 1601
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1600 ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 1421
            ASLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKF+VDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 1420 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQS 1241
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNVAGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 1240 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFVQEKRLIGKYFEEISQDTG 1061
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEIL+NVKF+QEKRLIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1060 KYVFGVDDTLKALEMGAVETLIVWENLDINRYVLKNTATSEIVIKHLNKEQEGNESNFRD 881
            KYVFGVDDTLKALEMGAVE LIVWENLDINRYVLKN +T EI+IKHLNKEQE N+SNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNASTGEIIIKHLNKEQEANQSNFRD 360

Query: 880  PATSAELEVQEKLSLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDM 701
            PATS+ELEVQEK++LLEWFANEYKKFGC+LEFVTNKSQEGSQFCRGFGGIGG+LRYQLD+
Sbjct: 361  PATSSELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 700  RSFDELSDDGEVYDDSE 650
            RSFDELS DGE YDDSE
Sbjct: 421  RSFDELS-DGEEYDDSE 436


>ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Cucumis sativus]
          Length = 436

 Score =  789 bits (2038), Expect = 0.0
 Identities = 397/437 (90%), Positives = 413/437 (94%)
 Frame = -2

Query: 1960 MGDAQETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN 1781
            M DA ETDKN               ARGNGTSMISLIMPPRDQ+SRVTKMLGDE+GTASN
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1780 IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN 1601
            IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT+DGKEKKVTIDFEPF+PIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1600 ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 1421
            ASLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTREVLHKF+VDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 1420 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQS 1241
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INPATSQPNVAGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 1240 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFVQEKRLIGKYFEEISQDTG 1061
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEIL+NVKF+QEKRLIGKYFEEISQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 1060 KYVFGVDDTLKALEMGAVETLIVWENLDINRYVLKNTATSEIVIKHLNKEQEGNESNFRD 881
            KYVFGVDDTLKALEMGAVE LIVWENLDINRYVLKN AT EI+IKHLNKEQE N+SNFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNAATGEIIIKHLNKEQEANQSNFRD 360

Query: 880  PATSAELEVQEKLSLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGLLRYQLDM 701
             ATSAELEVQEK++LLEWFANEYKKFGC+LEFVTNKSQEGSQFCRGFGGIGG+LRYQLD+
Sbjct: 361  SATSAELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 700  RSFDELSDDGEVYDDSE 650
            RSFDELS DGE YDDSE
Sbjct: 421  RSFDELS-DGEEYDDSE 436


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