BLASTX nr result

ID: Coptis24_contig00007653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007653
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318705.1| predicted protein [Populus trichocarpa] gi|2...    72   1e-18
ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244...    81   8e-17
ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|2...    74   6e-16
ref|XP_002511226.1| conserved hypothetical protein [Ricinus comm...    72   1e-15
ref|XP_003549841.1| PREDICTED: uncharacterized protein LOC100812...    75   1e-12

>ref|XP_002318705.1| predicted protein [Populus trichocarpa] gi|222859378|gb|EEE96925.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 72.0 bits (175), Expect(2) = 1e-18
 Identities = 35/55 (63%), Positives = 39/55 (70%)
 Frame = -1

Query: 165 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMLNQDRLEGEARPEIVWLVMKE 1
           D+EKKI++EKDTCPGFISDG  RV W NEAY KM+ Q   EG      VWL MKE
Sbjct: 201 DDEKKINMEKDTCPGFISDGYGRVTWENEAYRKMVGQG--EGGDHQVFVWLAMKE 253



 Score = 47.8 bits (112), Expect(2) = 1e-18
 Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -2

Query: 365 VSSNLRVLTPRPVRPVGSCVIVECLTDTCTE-EMLGSTDEEKKIH 234
           VS++  V+ PR V  VGSCV VEC+TDT  + + LG TD+EKKI+
Sbjct: 163 VSADQTVVMPRVVNIVGSCVTVECVTDTWVDLDGLGRTDDEKKIN 207



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 41/72 (56%), Positives = 46/72 (63%), Gaps = 9/72 (12%)
 Frame = -2

Query: 845 MDGRGGECCIARYPRGAYDN--SKIDRIMLRFRPIAPKPVS-------SAGGTSPGENEA 693
           MD RGG CCIARY     +N  SK+DRIMLRFRPIAPKP +       S GG+SP E   
Sbjct: 1   MDSRGG-CCIARYSSVGGENGMSKVDRIMLRFRPIAPKPATATSGSSVSGGGSSP-EMSD 58

Query: 692 LFKTSGRVKRKY 657
           +   SGR KRKY
Sbjct: 59  VSPRSGRGKRKY 70


>ref|XP_002279421.1| PREDICTED: uncharacterized protein LOC100244084 [Vitis vinifera]
          Length = 289

 Score = 60.8 bits (146), Expect(2) = 8e-17
 Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
 Frame = -1

Query: 165 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMLNQDRLEGEARP---EIVWLVMK 4
           DEEK  +L++DTCPGF+SDG NRV WTN AY +M+      G   P    +VWLVMK
Sbjct: 184 DEEKINNLDRDTCPGFVSDGLNRVTWTNAAYRRMV------GHVTPGPEMMVWLVMK 234



 Score = 52.8 bits (125), Expect(2) = 8e-17
 Identities = 27/44 (61%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = -2

Query: 371 RAVSSNLRVLTPRPVRPVGSCVIVECLTDTCTE-EMLGSTDEEK 243
           RAV ++  V+ P+PVR VGSCV VEC+TDT  + + LGSTDEEK
Sbjct: 144 RAVITDRTVVMPQPVRLVGSCVTVECVTDTWVDGDWLGSTDEEK 187



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = -2

Query: 845 MDGRGGECCIARYPRGAYDNSKIDRIMLRFRPIAPKPVS--SAGGTSPGENEALFKTSGR 672
           MD +GG CCIARY  GAYD SK+DRIMLRFRPIAPKP S  S  G S  +++ ++  +GR
Sbjct: 1   MDAKGG-CCIARYAGGAYDMSKVDRIMLRFRPIAPKPTSAGSVSGGSTLKSDEVYLRTGR 59

Query: 671 VKRKYIRD 648
            KR+Y+RD
Sbjct: 60  GKRRYVRD 67


>ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|222869226|gb|EEF06357.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 71.6 bits (174), Expect(2) = 6e-16
 Identities = 34/55 (61%), Positives = 40/55 (72%)
 Frame = -1

Query: 165 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMLNQDRLEGEARPEIVWLVMKE 1
           D+EK+++LEKDTCPGFISDG  RV WTNEAY KM+ Q   EG      VWL +KE
Sbjct: 207 DKEKRVNLEKDTCPGFISDGYGRVTWTNEAYRKMVGQG--EGGDHQVFVWLAIKE 259



 Score = 38.9 bits (89), Expect(2) = 6e-16
 Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
 Frame = -2

Query: 365 VSSNLRVLTPRPVRPVGSCVIVECLTDTCTE-EMLGSTDEEKKIH 234
           V ++  V+ P  +  VGSCV +EC+TDT  + + LG TD+EK+++
Sbjct: 169 VPADRTVVMPGVMNIVGSCVTLECVTDTWVDVDGLGRTDKEKRVN 213



 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 45/73 (61%), Positives = 50/73 (68%), Gaps = 10/73 (13%)
 Frame = -2

Query: 845 MDGRGGECCIARYPRG--AYDNSKIDRIMLRFRPIAPKPVS--------SAGGTSPGENE 696
           MDGRGG CCIARY  G  AYD SK+DRIMLRFRPIAPKP +        S GG+SP  ++
Sbjct: 1   MDGRGG-CCIARYAGGGGAYDMSKVDRIMLRFRPIAPKPSTAPSSAAFVSGGGSSPEMSD 59

Query: 695 ALFKTSGRVKRKY 657
           A    SGR KRKY
Sbjct: 60  A-SPRSGRGKRKY 71


>ref|XP_002511226.1| conserved hypothetical protein [Ricinus communis]
           gi|223550341|gb|EEF51828.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 71.6 bits (174), Expect(2) = 1e-15
 Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = -1

Query: 165 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMLNQ--DRLEGEARPEIVWLVMKE 1
           DEEK+++LE+DTCPGFISDG  RV WTNEAY KM  Q  D   GE    +VWLVMK+
Sbjct: 185 DEEKRMNLERDTCPGFISDGFGRVTWTNEAYKKMAGQGEDWRRGEV---VVWLVMKD 238



 Score = 37.7 bits (86), Expect(2) = 1e-15
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = -2

Query: 386 TPIWQRAVSSNLRVLTPRPVRPV-GSCVIVECLTDTCTE-EMLGSTDEEKKIH 234
           T ++  +V     V  P+ +R V GSCV VEC+TDT    + LG TDEEK+++
Sbjct: 139 TMLFGMSVDHQNVVTHPQIMRVVMGSCVTVECITDTWVNLDGLGGTDEEKRMN 191



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 36/68 (52%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
 Frame = -2

Query: 845 MDGRGGECCIARYPRGA------YDNSKIDRIMLRFRPIAPKPVSSAGGTSPGENEALFK 684
           MDGRGG CCIARY  G       YD S IDRIML+FRPIAPKP ++   +S  E + +  
Sbjct: 1   MDGRGG-CCIARYGGGGGEGSAGYDMSTIDRIMLKFRPIAPKPANTF--SSSPEIDEVGS 57

Query: 683 TSGRVKRK 660
            S R KR+
Sbjct: 58  RSSRGKRR 65


>ref|XP_003549841.1| PREDICTED: uncharacterized protein LOC100812834 [Glycine max]
          Length = 290

 Score = 62.0 bits (149), Expect(2) = 1e-12
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = -1

Query: 165 DEEKKIHLEKDTCPGFISDGCNRVRWTNEAYGKMLNQDRLEGEARPEIVWLVMK 4
           DEE++++L  DTCPGFISDG  RV WTNEAYGKM+   + EG+     V LV K
Sbjct: 180 DEERRLNLSNDTCPGFISDGYGRVTWTNEAYGKMMMM-KGEGDEGQGPVLLVNK 232



 Score = 37.7 bits (86), Expect(2) = 1e-12
 Identities = 18/28 (64%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = -2

Query: 314 SCVIVECLTDTCTE-EMLGSTDEEKKIH 234
           SCV VE +TDTC E E LGSTDEE++++
Sbjct: 159 SCVTVEGVTDTCLESEWLGSTDEERRLN 186



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 39/68 (57%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
 Frame = -2

Query: 845 MDGRGGECCIARYPRGAYDNSKIDRIMLRFRPIAPKPVSSAGGT--SPGENEALFKTSGR 672
           MDGRGG CCIARY  GA   S +D+IMLRFRPIAPKP ++A  +  S  E+   F  +G 
Sbjct: 1   MDGRGG-CCIARYVPGASHGSTVDKIMLRFRPIAPKPAAAATASDGSSSESSDAFLKNGT 59

Query: 671 VKRKYIRD 648
            KRKY+RD
Sbjct: 60  TKRKYVRD 67


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