BLASTX nr result

ID: Coptis24_contig00007651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007651
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY96181.1| hypothetical protein OsI_18065 [Oryza sativa Indi...   111   5e-23
gb|AAM34765.1|AF509865_1 nam-like protein 2 [Petunia x hybrida]       108   4e-22
gb|AFW78062.1| putative NAC domain transcription factor superfam...   107   8e-22
ref|XP_003568407.1| PREDICTED: uncharacterized protein LOC100821...   107   8e-22
ref|XP_003581627.1| PREDICTED: NAC domain-containing protein 78-...   107   1e-21

>gb|EAY96181.1| hypothetical protein OsI_18065 [Oryza sativa Indica Group]
          Length = 400

 Score =  111 bits (278), Expect = 5e-23
 Identities = 46/69 (66%), Positives = 58/69 (84%)
 Frame = +3

Query: 3   SPWDLPGKSCMRSGDREWFFFCPRDRKYANGPRLNRASAVGYWKTTGRDRAICNDSQTVG 182
           +PWDLP KS ++S DREW+FFCPRDRKY++G R NR++  GYWK TG+DR +  +SQTVG
Sbjct: 47  APWDLPEKSSLQSKDREWYFFCPRDRKYSSGSRTNRSTEAGYWKATGKDRPVIYNSQTVG 106

Query: 183 MKRTLIFHL 209
           MKRTL+FHL
Sbjct: 107 MKRTLVFHL 115


>gb|AAM34765.1|AF509865_1 nam-like protein 2 [Petunia x hybrida]
          Length = 487

 Score =  108 bits (270), Expect = 4e-22
 Identities = 44/68 (64%), Positives = 55/68 (80%)
 Frame = +3

Query: 3   SPWDLPGKSCMRSGDREWFFFCPRDRKYANGPRLNRASAVGYWKTTGRDRAICNDSQTVG 182
           SPWDLPGK C +S D EW+FFCPR+RKYA+G R+NRA+  GYWKTTG+DR++  D + VG
Sbjct: 45  SPWDLPGKCCYKSKDLEWYFFCPRERKYASGARMNRATETGYWKTTGKDRSVIYDEKVVG 104

Query: 183 MKRTLIFH 206
             +TLIFH
Sbjct: 105 SVKTLIFH 112


>gb|AFW78062.1| putative NAC domain transcription factor superfamily protein
           isoform 1 [Zea mays] gi|413945414|gb|AFW78063.1|
           putative NAC domain transcription factor superfamily
           protein isoform 2 [Zea mays]
          Length = 452

 Score =  107 bits (268), Expect = 8e-22
 Identities = 47/67 (70%), Positives = 55/67 (82%)
 Frame = +3

Query: 6   PWDLPGKSCMRSGDREWFFFCPRDRKYANGPRLNRASAVGYWKTTGRDRAICNDSQTVGM 185
           PWDLP KS +RS D EWFFFCPRD+KY NG R NRA+  GYWKT+G+DR I  +S+TVGM
Sbjct: 48  PWDLPEKSSLRSKDLEWFFFCPRDKKYPNGSRTNRATPNGYWKTSGKDRIIMLNSRTVGM 107

Query: 186 KRTLIFH 206
           K+TLIFH
Sbjct: 108 KKTLIFH 114


>ref|XP_003568407.1| PREDICTED: uncharacterized protein LOC100821002 [Brachypodium
           distachyon]
          Length = 464

 Score =  107 bits (268), Expect = 8e-22
 Identities = 46/68 (67%), Positives = 56/68 (82%)
 Frame = +3

Query: 3   SPWDLPGKSCMRSGDREWFFFCPRDRKYANGPRLNRASAVGYWKTTGRDRAICNDSQTVG 182
           +PWDLP KSC+RS D EWFFFCPRD+KY  G R NRA+  GYWKT+G+DR I  +S+TVG
Sbjct: 47  APWDLPEKSCLRSKDLEWFFFCPRDKKYPKGSRTNRATPNGYWKTSGKDRTIELNSRTVG 106

Query: 183 MKRTLIFH 206
           +K+TLIFH
Sbjct: 107 LKKTLIFH 114


>ref|XP_003581627.1| PREDICTED: NAC domain-containing protein 78-like [Brachypodium
           distachyon]
          Length = 390

 Score =  107 bits (266), Expect = 1e-21
 Identities = 42/68 (61%), Positives = 58/68 (85%)
 Frame = +3

Query: 3   SPWDLPGKSCMRSGDREWFFFCPRDRKYANGPRLNRASAVGYWKTTGRDRAICNDSQTVG 182
           +PW+LP K+ +++GDREW+FFC RDRKY++G R NR++  GYWK TG+DRA+ + +QTVG
Sbjct: 46  APWELPEKASLQTGDREWYFFCMRDRKYSSGSRTNRSTEAGYWKATGKDRAVIHKNQTVG 105

Query: 183 MKRTLIFH 206
           MKRTL+FH
Sbjct: 106 MKRTLVFH 113


Top