BLASTX nr result
ID: Coptis24_contig00007631
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007631
(1373 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565310.1| uncharacterized protein [Arabidopsis thaliana] ... 259 e-128
ref|XP_002467140.1| hypothetical protein SORBIDRAFT_01g020270 [S... 210 5e-89
ref|NP_001130319.1| uncharacterized protein LOC100191413 [Zea ma... 209 1e-88
tpg|DAA49798.1| TPA: hypothetical protein ZEAMMB73_357647 [Zea m... 209 1e-88
emb|CBI28472.3| unnamed protein product [Vitis vinifera] 301 3e-79
>ref|NP_565310.1| uncharacterized protein [Arabidopsis thaliana]
gi|4689474|gb|AAD27910.1| expressed protein [Arabidopsis
thaliana] gi|15810337|gb|AAL07056.1| unknown protein
[Arabidopsis thaliana] gi|51536602|gb|AAU05539.1|
At2g04280 [Arabidopsis thaliana]
gi|330250724|gb|AEC05818.1| uncharacterized protein
[Arabidopsis thaliana]
Length = 568
Score = 259 bits (663), Expect(2) = e-128
Identities = 128/215 (59%), Positives = 158/215 (73%), Gaps = 1/215 (0%)
Frame = -1
Query: 1226 RTPSRSASFRPENLGQNALAMIGNLCFTLFVLAVLIFTIIAATYQPEDPLFHPSAKITSF 1047
R+ R FR ENLGQNAL +IGN+ F+LFV VLIFTIIAATY+PEDPLFHPS KIT+F
Sbjct: 4 RSAIRGGGFRAENLGQNALTLIGNIGFSLFVFGVLIFTIIAATYEPEDPLFHPSDKITTF 63
Query: 1046 LVSKSNATFMSDSTITKTGEDFMTSNQTAFQDFINVTDVSEPTXXXXXXXXXXVNSECEN 867
L S SNAT SD ++ KTGEDFM +NQTAF +FIN+ DV T ++ E
Sbjct: 64 LTSTSNATLRSDDSVVKTGEDFMLANQTAFAEFININDVEAST---NETTTEEEGNKLEC 120
Query: 866 EDGADIDCSNTDVFHLMMRTAIEHFKDIHFYRFGKPVKG-SNASTCDMAWRFRPKEGKAA 690
+ IDC + VFHLMMR I+ FKDIHFY+FGKPV G ++CDMAWR+RP++GK+A
Sbjct: 121 DVNTPIDCKDQQVFHLMMRATIDKFKDIHFYKFGKPVTGEEGVNSCDMAWRYRPRDGKSA 180
Query: 689 AFYKDYRRFVITRTDNKCNFTVVAIGDYHSGGNAR 585
AFYKDYRRFV+ +++N C+ +VV IG+YHSG NAR
Sbjct: 181 AFYKDYRRFVVAKSEN-CSVSVVGIGEYHSGLNAR 214
Score = 226 bits (575), Expect(2) = e-128
Identities = 109/159 (68%), Positives = 132/159 (83%), Gaps = 5/159 (3%)
Frame = -3
Query: 462 EKKTLVGKEEGNGAS---SLPVVGEVVNDTLPVVESEDSFSSGKYLVYNGGGDRCKGMDH 292
+K G E+ G SLPVVGE+VND+LP+VES+ F +GKYLVY GGGDRCK M+H
Sbjct: 217 KKNQKAGFEKTGGKKDDFSLPVVGELVNDSLPMVESDSVFKTGKYLVYVGGGDRCKSMNH 276
Query: 291 FLWSFLCALGEAQYLNRTLVMDLSMCLSSVYSTSNQDEEGKDFRFYFDFEHLKESASVLD 112
FLWSFLCALGEAQYLNRTLVMDL++CLSS+Y++S Q+EEGKDFRFYFDFEHLKE+ASVLD
Sbjct: 277 FLWSFLCALGEAQYLNRTLVMDLTLCLSSIYTSSGQNEEGKDFRFYFDFEHLKEAASVLD 336
Query: 111 QTQFWSDWGKWQK--QDALGLYLVEDLKITPMKLADVKD 1
+ QFW+ WGK +K ++ L L+LVED ++TPMKLA VKD
Sbjct: 337 EAQFWAQWGKLRKKRRNRLNLHLVEDFRVTPMKLAAVKD 375
>ref|XP_002467140.1| hypothetical protein SORBIDRAFT_01g020270 [Sorghum bicolor]
gi|241920994|gb|EER94138.1| hypothetical protein
SORBIDRAFT_01g020270 [Sorghum bicolor]
Length = 637
Score = 210 bits (534), Expect(2) = 5e-89
Identities = 95/154 (61%), Positives = 123/154 (79%)
Frame = -3
Query: 462 EKKTLVGKEEGNGASSLPVVGEVVNDTLPVVESEDSFSSGKYLVYNGGGDRCKGMDHFLW 283
++ T + G A + VVGE VND+LPVV SE FS GKYL+Y GGG+RCK M+HF+W
Sbjct: 293 DENTANNEAAGAAAEPVFVVGEAVNDSLPVVASESDFSRGKYLIYIGGGERCKSMNHFIW 352
Query: 282 SFLCALGEAQYLNRTLVMDLSMCLSSVYSTSNQDEEGKDFRFYFDFEHLKESASVLDQTQ 103
FLCALGEAQ+LNRTLVMDL++CL++ Y++S +DE+ +DFR YFDFEHLK+SASV+DQ+Q
Sbjct: 353 GFLCALGEAQFLNRTLVMDLNVCLNARYTSSGKDED-RDFRLYFDFEHLKQSASVIDQSQ 411
Query: 102 FWSDWGKWQKQDALGLYLVEDLKITPMKLADVKD 1
FW DWGKW K+D L + ED+++TPMKL D+KD
Sbjct: 412 FWQDWGKWHKKDRLKNFYTEDIRMTPMKLRDIKD 445
Score = 145 bits (367), Expect(2) = 5e-89
Identities = 93/241 (38%), Positives = 130/241 (53%), Gaps = 44/241 (18%)
Frame = -1
Query: 1175 ALAMIGNLCFTLFVLAVLIFTIIAATYQPEDPLFHPSA-KITSFLVSK-SNATFMSDSTI 1002
AL GNL F LFV AVL FT++AA + P+DPL HPS+ ++T FL S S +TF++D ++
Sbjct: 23 ALRSGGNLLFALFVAAVLAFTLLAAVHSPDDPLLHPSSHQLTDFLTSSTSTSTFLTDDSV 82
Query: 1001 TKTGEDFMTSNQTAFQD--------------FINVTDV------SEP-TXXXXXXXXXXV 885
+TGEDF +S+ A + FI +++V +EP T
Sbjct: 83 LRTGEDFNSSSTGAAGEAAAGGVEVVAEAVPFIKLSEVGAEAEKTEPETERAVTVDTDAA 142
Query: 884 NSE---------------CENEDGADIDCS-NTDVFHLMMRTAIEHFKDIHFYRFGKPVK 753
E C+ E A +DC+ + ++F+L+MR AIE F D+HFYRFG+PV
Sbjct: 143 TGEGAAVAEETAVAEAVSCDTE--APVDCTGDRELFNLLMRAAIERFPDLHFYRFGRPVA 200
Query: 752 -GSNASTCDMAWRFRPKEGKAAA----FYKDYRRFVITRTDNKCNFTVVAIGDYHSGGNA 588
+ CD+AWRFRP +YKDYRRF +TR N C V +G+YHSG A
Sbjct: 201 VPGSPMECDLAWRFRPAADAIGTGRTTYYKDYRRFTLTRDINTCTLVVDTVGEYHSGVGA 260
Query: 587 R 585
+
Sbjct: 261 K 261
>ref|NP_001130319.1| uncharacterized protein LOC100191413 [Zea mays]
gi|194688836|gb|ACF78502.1| unknown [Zea mays]
Length = 637
Score = 209 bits (533), Expect(2) = 1e-88
Identities = 95/154 (61%), Positives = 123/154 (79%)
Frame = -3
Query: 462 EKKTLVGKEEGNGASSLPVVGEVVNDTLPVVESEDSFSSGKYLVYNGGGDRCKGMDHFLW 283
++ T + G A + VVGE VND+LPVV SE FS GKYL+Y GGG+RCK M+HF+W
Sbjct: 293 DENTANNEAAGAAAEPVFVVGEAVNDSLPVVASESDFSRGKYLIYIGGGERCKSMNHFIW 352
Query: 282 SFLCALGEAQYLNRTLVMDLSMCLSSVYSTSNQDEEGKDFRFYFDFEHLKESASVLDQTQ 103
FLCALGEAQ+LNRTLVMDL++CL++ Y++S +DEE +DFR YFDFEHLK+SASV+DQ+Q
Sbjct: 353 GFLCALGEAQFLNRTLVMDLNVCLNARYTSSGKDEE-RDFRLYFDFEHLKQSASVIDQSQ 411
Query: 102 FWSDWGKWQKQDALGLYLVEDLKITPMKLADVKD 1
FW DWG+W K+D L + ED+++TPMKL D+KD
Sbjct: 412 FWQDWGQWHKKDRLKNFYTEDIRMTPMKLRDIKD 445
Score = 145 bits (365), Expect(2) = 1e-88
Identities = 93/241 (38%), Positives = 131/241 (54%), Gaps = 44/241 (18%)
Frame = -1
Query: 1175 ALAMIGNLCFTLFVLAVLIFTIIAATYQPEDPLFHPSA-KITSFLVSK-SNATFMSDSTI 1002
AL GNL F LFV AVL FT++AA + P+DPL HPS+ ++T FL S S +TF++D ++
Sbjct: 23 ALRSGGNLLFALFVAAVLAFTLLAAFHSPDDPLLHPSSHQLTDFLTSATSTSTFLTDDSV 82
Query: 1001 TKTGEDFMTSNQTAFQD--------------FINVTDV------SEP-TXXXXXXXXXXV 885
+TGEDF +S+ A + FI +++V +EP T
Sbjct: 83 LRTGEDFNSSSTGAAGEVAAGGVEVVAEAVPFIKLSEVGAEAEKTEPETERAVTVDTDAA 142
Query: 884 NSE---------------CENEDGADIDCS-NTDVFHLMMRTAIEHFKDIHFYRFGKPVK 753
E C+ E A +DC+ + ++F+L+MR AIE F D+HFYRFG+PV
Sbjct: 143 TGEGAAVAEETAVAEAVSCDTE--APVDCTGDRELFNLLMRAAIERFPDLHFYRFGRPVA 200
Query: 752 -GSNASTCDMAWRFRPKEGKAAA----FYKDYRRFVITRTDNKCNFTVVAIGDYHSGGNA 588
+ CD+AWRFRP +YKDYRRF +TR N C+ V +G+YHSG A
Sbjct: 201 VPGSPMECDLAWRFRPAADAIGTGRTTYYKDYRRFTLTRDVNTCSLVVDTVGEYHSGVGA 260
Query: 587 R 585
+
Sbjct: 261 K 261
>tpg|DAA49798.1| TPA: hypothetical protein ZEAMMB73_357647 [Zea mays]
Length = 500
Score = 209 bits (533), Expect(2) = 1e-88
Identities = 95/154 (61%), Positives = 123/154 (79%)
Frame = -3
Query: 462 EKKTLVGKEEGNGASSLPVVGEVVNDTLPVVESEDSFSSGKYLVYNGGGDRCKGMDHFLW 283
++ T + G A + VVGE VND+LPVV SE FS GKYL+Y GGG+RCK M+HF+W
Sbjct: 293 DENTANNEAAGAAAEPVFVVGEAVNDSLPVVASESDFSRGKYLIYIGGGERCKSMNHFIW 352
Query: 282 SFLCALGEAQYLNRTLVMDLSMCLSSVYSTSNQDEEGKDFRFYFDFEHLKESASVLDQTQ 103
FLCALGEAQ+LNRTLVMDL++CL++ Y++S +DEE +DFR YFDFEHLK+SASV+DQ+Q
Sbjct: 353 GFLCALGEAQFLNRTLVMDLNVCLNARYTSSGKDEE-RDFRLYFDFEHLKQSASVIDQSQ 411
Query: 102 FWSDWGKWQKQDALGLYLVEDLKITPMKLADVKD 1
FW DWG+W K+D L + ED+++TPMKL D+KD
Sbjct: 412 FWQDWGQWHKKDRLKNFYTEDIRMTPMKLRDIKD 445
Score = 145 bits (365), Expect(2) = 1e-88
Identities = 93/241 (38%), Positives = 131/241 (54%), Gaps = 44/241 (18%)
Frame = -1
Query: 1175 ALAMIGNLCFTLFVLAVLIFTIIAATYQPEDPLFHPSA-KITSFLVSK-SNATFMSDSTI 1002
AL GNL F LFV AVL FT++AA + P+DPL HPS+ ++T FL S S +TF++D ++
Sbjct: 23 ALRSGGNLLFALFVAAVLAFTLLAAFHSPDDPLLHPSSHQLTDFLTSATSTSTFLTDDSV 82
Query: 1001 TKTGEDFMTSNQTAFQD--------------FINVTDV------SEP-TXXXXXXXXXXV 885
+TGEDF +S+ A + FI +++V +EP T
Sbjct: 83 LRTGEDFNSSSTGAAGEVAAGGVEVVAEAVPFIKLSEVGAEAEKTEPETERAVTVDTDAA 142
Query: 884 NSE---------------CENEDGADIDCS-NTDVFHLMMRTAIEHFKDIHFYRFGKPVK 753
E C+ E A +DC+ + ++F+L+MR AIE F D+HFYRFG+PV
Sbjct: 143 TGEGAAVAEETAVAEAVSCDTE--APVDCTGDRELFNLLMRAAIERFPDLHFYRFGRPVA 200
Query: 752 -GSNASTCDMAWRFRPKEGKAAA----FYKDYRRFVITRTDNKCNFTVVAIGDYHSGGNA 588
+ CD+AWRFRP +YKDYRRF +TR N C+ V +G+YHSG A
Sbjct: 201 VPGSPMECDLAWRFRPAADAIGTGRTTYYKDYRRFTLTRDVNTCSLVVDTVGEYHSGVGA 260
Query: 587 R 585
+
Sbjct: 261 K 261
>emb|CBI28472.3| unnamed protein product [Vitis vinifera]
Length = 622
Score = 301 bits (770), Expect = 3e-79
Identities = 146/211 (69%), Positives = 169/211 (80%)
Frame = -1
Query: 1217 SRSASFRPENLGQNALAMIGNLCFTLFVLAVLIFTIIAATYQPEDPLFHPSAKITSFLVS 1038
SR+ SFRPENLGQNA+ MIGNLCFTLFV+ VLIFTIIAATY+PEDPLFHPS KIT+FL S
Sbjct: 16 SRTGSFRPENLGQNAMVMIGNLCFTLFVIGVLIFTIIAATYEPEDPLFHPSTKITTFLTS 75
Query: 1037 KSNATFMSDSTITKTGEDFMTSNQTAFQDFINVTDVSEPTXXXXXXXXXXVNSECENEDG 858
SNATF SD+++ KTGEDFM N+TA FIN+TDV PT ++ECE
Sbjct: 76 TSNATFKSDNSVVKTGEDFMRPNETAIAAFINITDVQNPT---------PDSTECEGGVD 126
Query: 857 ADIDCSNTDVFHLMMRTAIEHFKDIHFYRFGKPVKGSNASTCDMAWRFRPKEGKAAAFYK 678
IDCS+ DVFHLMMR AIE F+DIHFYRFGKPV+GSN STCDMAWRFRPKEGK A+FYK
Sbjct: 127 QPIDCSDPDVFHLMMRAAIEVFRDIHFYRFGKPVRGSNESTCDMAWRFRPKEGKTASFYK 186
Query: 677 DYRRFVITRTDNKCNFTVVAIGDYHSGGNAR 585
DYRRFVI++++N C +V+ IGDYH+G NAR
Sbjct: 187 DYRRFVISKSEN-CTLSVLGIGDYHTGVNAR 216
Score = 237 bits (605), Expect = 5e-60
Identities = 109/132 (82%), Positives = 121/132 (91%)
Frame = -3
Query: 396 VVNDTLPVVESEDSFSSGKYLVYNGGGDRCKGMDHFLWSFLCALGEAQYLNRTLVMDLSM 217
VVND+LPVVESE SFS GKYLVY GGGDRCK M+H+LWSFLCALGEAQYLNRTL+MDLS+
Sbjct: 225 VVNDSLPVVESEGSFSQGKYLVYIGGGDRCKSMNHYLWSFLCALGEAQYLNRTLIMDLSL 284
Query: 216 CLSSVYSTSNQDEEGKDFRFYFDFEHLKESASVLDQTQFWSDWGKWQKQDALGLYLVEDL 37
CLSS+Y+ SN+DEEGKDFR YFDFEHLKESASVLDQ QFWSDW KWQK+D L L+LVED
Sbjct: 285 CLSSIYTKSNRDEEGKDFRLYFDFEHLKESASVLDQAQFWSDWNKWQKKDGLNLHLVEDF 344
Query: 36 KITPMKLADVKD 1
+ITPMKLA+VKD
Sbjct: 345 RITPMKLAEVKD 356