BLASTX nr result

ID: Coptis24_contig00007615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007615
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246...   181   7e-44
emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]   181   7e-44
ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002509805.1| conserved hypothetical protein [Ricinus comm...   160   1e-37
ref|XP_002303590.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36

>ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera]
          Length = 758

 Score =  181 bits (459), Expect = 7e-44
 Identities = 95/184 (51%), Positives = 125/184 (67%), Gaps = 1/184 (0%)
 Frame = -3

Query: 551 TEFVKKDHHSKVVTSSPAXXXXXXXXXXXXGVPYFEFTFKDPEDVLSAKTWRANNAFNWV 372
           ++F KK+ H   V  SPA            GVP+FEF+ K PEDVL AKTW+ NNAFNWV
Sbjct: 327 SQFAKKEFHHYAVPCSPAHLHGHLKLETKHGVPFFEFSLKHPEDVLVAKTWKVNNAFNWV 386

Query: 371 YTFHSMKSRRTSNSSGWGTRERHKESSMIGQMQVSCFLLSEIKHSGAFDNSMVTEFVLYD 192
           YTFHS+++R+ SN+SGWG ++ +KE+SM+GQMQVSC+L SE++  G F NSMVTEFVLYD
Sbjct: 387 YTFHSIRNRKKSNASGWGLKDSNKETSMVGQMQVSCYLCSELQDGGKFGNSMVTEFVLYD 446

Query: 191 IMHARRTLGAQNSSDSLTKSVEAIKGATGENLVVEGIPCEQND-SYDAVNDQHQTGHASA 15
           I HAR+++ A+ +S     S +A + A G N  + G   E +D S DAV  + QT HAS 
Sbjct: 447 IAHARKSITARENS---CHSPQAAEPAKGSNEGLAGQSLELDDVSDDAVKLKCQTNHASN 503

Query: 14  TDNF 3
            D+F
Sbjct: 504 HDDF 507


>emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]
          Length = 937

 Score =  181 bits (459), Expect = 7e-44
 Identities = 95/184 (51%), Positives = 125/184 (67%), Gaps = 1/184 (0%)
 Frame = -3

Query: 551  TEFVKKDHHSKVVTSSPAXXXXXXXXXXXXGVPYFEFTFKDPEDVLSAKTWRANNAFNWV 372
            ++F KK+ H   V  SPA            GVP+FEF+ K PEDVL AKTW+ NNAFNWV
Sbjct: 506  SQFAKKEFHHYAVPCSPAHLHGHLKLETKHGVPFFEFSLKHPEDVLVAKTWKVNNAFNWV 565

Query: 371  YTFHSMKSRRTSNSSGWGTRERHKESSMIGQMQVSCFLLSEIKHSGAFDNSMVTEFVLYD 192
            YTFHS+++R+ SN+SGWG ++ +KE+SM+GQMQVSC+L SE++  G F NSMVTEFVLYD
Sbjct: 566  YTFHSIRNRKKSNASGWGLKDSNKETSMVGQMQVSCYLCSELQDGGKFGNSMVTEFVLYD 625

Query: 191  IMHARRTLGAQNSSDSLTKSVEAIKGATGENLVVEGIPCEQND-SYDAVNDQHQTGHASA 15
            I HAR+++ A+ +S     S +A + A G N  + G   E +D S DAV  + QT HAS 
Sbjct: 626  IAHARKSITARENS---CHSPQAAEPAKGSNEGLAGQSLELDDVSDDAVKLKCQTNHASN 682

Query: 14   TDNF 3
             D+F
Sbjct: 683  HDDF 686


>ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|222846790|gb|EEE84337.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score =  166 bits (421), Expect = 2e-39
 Identities = 85/184 (46%), Positives = 114/184 (61%)
 Frame = -3

Query: 554 DTEFVKKDHHSKVVTSSPAXXXXXXXXXXXXGVPYFEFTFKDPEDVLSAKTWRANNAFNW 375
           D++  KKDHH   V  SP             GVP+FEF+   PE+VL AKTW+ANNAFNW
Sbjct: 310 DSQIAKKDHHHSAVACSPVHLHGRLKLENKHGVPFFEFSLDFPEEVLVAKTWKANNAFNW 369

Query: 374 VYTFHSMKSRRTSNSSGWGTRERHKESSMIGQMQVSCFLLSEIKHSGAFDNSMVTEFVLY 195
           VYTFHS+ SR+ SN++GWG  + +KES ++GQMQVSC+L S++K  G FDNSMVTEFV+Y
Sbjct: 370 VYTFHSISSRKKSNATGWGLTDGNKESLIVGQMQVSCYLCSKLKDGGNFDNSMVTEFVMY 429

Query: 194 DIMHARRTLGAQNSSDSLTKSVEAIKGATGENLVVEGIPCEQNDSYDAVNDQHQTGHASA 15
           DI HAR  +  ++S D        ++  +  N  + G   E   + DAV  +HQ  +A  
Sbjct: 430 DIAHARHRVSTEDSPD--------VRPDSSANPGLVGGSHEMGGNSDAVKLKHQPKYAFD 481

Query: 14  TDNF 3
             +F
Sbjct: 482 RGHF 485


>ref|XP_002509805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549704|gb|EEF51192.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 736

 Score =  160 bits (406), Expect = 1e-37
 Identities = 74/136 (54%), Positives = 99/136 (72%)
 Frame = -3

Query: 554 DTEFVKKDHHSKVVTSSPAXXXXXXXXXXXXGVPYFEFTFKDPEDVLSAKTWRANNAFNW 375
           D+  V+KDHH+     SP             G+P+FEF+ + PE+VL AKTW+ANNAFNW
Sbjct: 305 DSLLVRKDHHNLAAACSPVHLHGCLKLDNKHGIPHFEFSLECPEEVLVAKTWKANNAFNW 364

Query: 374 VYTFHSMKSRRTSNSSGWGTRERHKESSMIGQMQVSCFLLSEIKHSGAFDNSMVTEFVLY 195
           VYTFHS+ SR+ SN+SGWG  + +K+S ++GQM+VSC+L SE+K  G FDNSMVTEFVLY
Sbjct: 365 VYTFHSISSRKKSNASGWGLIDGNKDSLVVGQMEVSCYLCSELKDVGEFDNSMVTEFVLY 424

Query: 194 DIMHARRTLGAQNSSD 147
           DI HAR+++  Q+ +D
Sbjct: 425 DIAHARQSVSTQDPAD 440


>ref|XP_002303590.1| predicted protein [Populus trichocarpa] gi|222841022|gb|EEE78569.1|
           predicted protein [Populus trichocarpa]
          Length = 734

 Score =  156 bits (394), Expect = 2e-36
 Identities = 82/174 (47%), Positives = 109/174 (62%)
 Frame = -3

Query: 542 VKKDHHSKVVTSSPAXXXXXXXXXXXXGVPYFEFTFKDPEDVLSAKTWRANNAFNWVYTF 363
           VKKDHH   V  SP             GVP+FEF+   PE+VL AKTW+ANNA NWVYTF
Sbjct: 310 VKKDHHHSAVVCSPVHLHGCLKMEIKHGVPFFEFSLNRPEEVLVAKTWKANNASNWVYTF 369

Query: 362 HSMKSRRTSNSSGWGTRERHKESSMIGQMQVSCFLLSEIKHSGAFDNSMVTEFVLYDIMH 183
           HS+ +R+ SN++G G  + +KESS++GQMQVSC+L SE+K  G FDNS+VTEFVLYD +H
Sbjct: 370 HSISNRKKSNATGRGLSDGNKESSVVGQMQVSCYLCSELKDGGNFDNSLVTEFVLYDNVH 429

Query: 182 ARRTLGAQNSSDSLTKSVEAIKGATGENLVVEGIPCEQNDSYDAVNDQHQTGHA 21
           AR+ +  +  S  +   + A  G  G +  ++G       + DA   +HQ  HA
Sbjct: 430 ARQRVSTE-ESPGVRPDIGAKPGLVGGSHEMDG-------NSDAAKFKHQPQHA 475


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