BLASTX nr result

ID: Coptis24_contig00007613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007613
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC31614.1| Phyb1 [Pimpinella brachycarpa]                         219   1e-55
ref|XP_002299940.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-55
ref|NP_001154235.1| protein FRA10AC1 [Arabidopsis thaliana] gi|3...   216   1e-54
ref|NP_193239.5| protein FRA10AC1 [Arabidopsis thaliana] gi|3326...   216   1e-54
ref|XP_002870265.1| predicted protein [Arabidopsis lyrata subsp....   216   2e-54

>gb|AAC31614.1| Phyb1 [Pimpinella brachycarpa]
          Length = 244

 Score =  219 bits (559), Expect = 1e-55
 Identities = 101/118 (85%), Positives = 112/118 (94%)
 Frame = +3

Query: 3   KTDRDTLREGYRFIRSEEDDMDSSWEQRLVKRYYNKLFKEYCIADMSKYKKGKIGLRWRI 182
           KTD+DTLREGYRFIRSEEDD+D SWEQRLVKRYYNKLFKEYCIADMS+Y+ GKIGLRWR 
Sbjct: 59  KTDKDTLREGYRFIRSEEDDLDPSWEQRLVKRYYNKLFKEYCIADMSQYRTGKIGLRWRT 118

Query: 183 EKEVISGKGQFICGSKQCDEKDGLASYEVNFSYYEAGENKQALVKLVCCKKCAEKLVY 356
           EKEVISGKGQF+CG+K CDEKDGLASYEVNFSY+EAGE+KQALVKLV C++CA+KL Y
Sbjct: 119 EKEVISGKGQFVCGNKHCDEKDGLASYEVNFSYFEAGESKQALVKLVTCERCAKKLNY 176


>ref|XP_002299940.1| predicted protein [Populus trichocarpa] gi|222847198|gb|EEE84745.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  219 bits (559), Expect = 1e-55
 Identities = 103/118 (87%), Positives = 110/118 (93%)
 Frame = +3

Query: 3   KTDRDTLREGYRFIRSEEDDMDSSWEQRLVKRYYNKLFKEYCIADMSKYKKGKIGLRWRI 182
           +TDRDTLREGYRFIRSEEDDMD+SWEQRLVKRYY+KLFKEYCIADMS YK GKIGLRWR 
Sbjct: 58  RTDRDTLREGYRFIRSEEDDMDASWEQRLVKRYYDKLFKEYCIADMSHYKVGKIGLRWRT 117

Query: 183 EKEVISGKGQFICGSKQCDEKDGLASYEVNFSYYEAGENKQALVKLVCCKKCAEKLVY 356
           EKEVISGKGQFICG+K CD KDGLASYEVNFSY+EAGENKQALVKL+ C +CAEKL Y
Sbjct: 118 EKEVISGKGQFICGNKHCDVKDGLASYEVNFSYFEAGENKQALVKLILCDRCAEKLHY 175


>ref|NP_001154235.1| protein FRA10AC1 [Arabidopsis thaliana] gi|332658143|gb|AEE83543.1|
           protein FRA10AC1 [Arabidopsis thaliana]
          Length = 282

 Score =  216 bits (551), Expect = 1e-54
 Identities = 99/118 (83%), Positives = 112/118 (94%)
 Frame = +3

Query: 3   KTDRDTLREGYRFIRSEEDDMDSSWEQRLVKRYYNKLFKEYCIADMSKYKKGKIGLRWRI 182
           KTD+DTLREGYRFIRSEEDD+D SWEQRLVKRYY+KLFKEYCIADMS+YK GK+GLRWR 
Sbjct: 62  KTDQDTLREGYRFIRSEEDDLDPSWEQRLVKRYYDKLFKEYCIADMSRYKTGKMGLRWRT 121

Query: 183 EKEVISGKGQFICGSKQCDEKDGLASYEVNFSYYEAGENKQALVKLVCCKKCAEKLVY 356
           EKEV++GKGQF+CGSK CDEK+GLASYEVNFSY+EAGE+KQALVKLV C++CAEKL Y
Sbjct: 122 EKEVMTGKGQFMCGSKHCDEKEGLASYEVNFSYHEAGEDKQALVKLVACERCAEKLYY 179


>ref|NP_193239.5| protein FRA10AC1 [Arabidopsis thaliana] gi|332658142|gb|AEE83542.1|
           protein FRA10AC1 [Arabidopsis thaliana]
          Length = 278

 Score =  216 bits (551), Expect = 1e-54
 Identities = 99/118 (83%), Positives = 112/118 (94%)
 Frame = +3

Query: 3   KTDRDTLREGYRFIRSEEDDMDSSWEQRLVKRYYNKLFKEYCIADMSKYKKGKIGLRWRI 182
           KTD+DTLREGYRFIRSEEDD+D SWEQRLVKRYY+KLFKEYCIADMS+YK GK+GLRWR 
Sbjct: 58  KTDQDTLREGYRFIRSEEDDLDPSWEQRLVKRYYDKLFKEYCIADMSRYKTGKMGLRWRT 117

Query: 183 EKEVISGKGQFICGSKQCDEKDGLASYEVNFSYYEAGENKQALVKLVCCKKCAEKLVY 356
           EKEV++GKGQF+CGSK CDEK+GLASYEVNFSY+EAGE+KQALVKLV C++CAEKL Y
Sbjct: 118 EKEVMTGKGQFMCGSKHCDEKEGLASYEVNFSYHEAGEDKQALVKLVACERCAEKLYY 175


>ref|XP_002870265.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316101|gb|EFH46524.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 245

 Score =  216 bits (549), Expect = 2e-54
 Identities = 99/118 (83%), Positives = 111/118 (94%)
 Frame = +3

Query: 3   KTDRDTLREGYRFIRSEEDDMDSSWEQRLVKRYYNKLFKEYCIADMSKYKKGKIGLRWRI 182
           KTD+DTLREGYRFIRSEEDD + SWEQRLVKRYY+KLFKEYCIADMS+YK GK+GLRWR 
Sbjct: 58  KTDQDTLREGYRFIRSEEDDFNPSWEQRLVKRYYDKLFKEYCIADMSRYKTGKMGLRWRT 117

Query: 183 EKEVISGKGQFICGSKQCDEKDGLASYEVNFSYYEAGENKQALVKLVCCKKCAEKLVY 356
           EKEV++GKGQF+CGSK CDEK+GLASYEVNFSY+EAGE+KQALVKLV CK+CAEKL Y
Sbjct: 118 EKEVMTGKGQFLCGSKHCDEKEGLASYEVNFSYHEAGEDKQALVKLVACKRCAEKLYY 175


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