BLASTX nr result

ID: Coptis24_contig00007606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007606
         (1402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275703.1| PREDICTED: uncharacterized protein LOC100249...   258   3e-66
ref|XP_002527408.1| conserved hypothetical protein [Ricinus comm...   244   5e-62
ref|NP_564031.2| uncharacterized protein [Arabidopsis thaliana] ...   243   1e-61
gb|ABB83615.1| CA-responsive protein [Brassica oleracea]              235   2e-59
ref|XP_004155935.1| PREDICTED: uncharacterized protein LOC101226...   229   1e-57

>ref|XP_002275703.1| PREDICTED: uncharacterized protein LOC100249711 [Vitis vinifera]
            gi|297743078|emb|CBI35945.3| unnamed protein product
            [Vitis vinifera]
          Length = 314

 Score =  258 bits (658), Expect = 3e-66
 Identities = 136/179 (75%), Positives = 151/179 (84%), Gaps = 6/179 (3%)
 Frame = +2

Query: 506  QHKHCLDCLYPFTSSSSSATQRKIKQQYDQLVKSNGSKGLTMVQVGEFVNCLVEARNDLQ 685
            + K  L CLYPFTSSSS ATQRKIKQQYDQLVK +GSKGLT+ QVG+F NCL+EARN+LQ
Sbjct: 135  KEKQELVCLYPFTSSSS-ATQRKIKQQYDQLVKCHGSKGLTLAQVGQFANCLIEARNELQ 193

Query: 686  HKSEAIKRKFTITKALLLKAHRSSFDRLSQQLHKLEAEQKRLEEDANIYNRLQQQLKLSP 865
            HKSE I+RKFTITKALL KA RSSFDRL QQ++KLE EQKRLEEDA +YN LQQQLKLSP
Sbjct: 194  HKSEVIQRKFTITKALLFKADRSSFDRLRQQIYKLEMEQKRLEEDAFVYNWLQQQLKLSP 253

Query: 866  AYKKMLEVGARMELKASSDQLTKNMD------SEISFEELLAREKKDSFWQKNGKLRSC 1024
            AYKKMLE+ A MELKA S +LT+  D      S+ISFEELLA+EKKDSFWQKNGK RSC
Sbjct: 254  AYKKMLEISACMELKAKSGELTEGTDSTDTEFSDISFEELLAQEKKDSFWQKNGKPRSC 312


>ref|XP_002527408.1| conserved hypothetical protein [Ricinus communis]
            gi|223533218|gb|EEF34974.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 334

 Score =  244 bits (622), Expect = 5e-62
 Identities = 130/172 (75%), Positives = 144/172 (83%), Gaps = 3/172 (1%)
 Frame = +2

Query: 512  KHCLDCLYPFTSSSSSATQRKIKQQYDQLVKSNGSKGLTMVQVGEFVNCLVEARNDLQHK 691
            K  L CLYPFTSSSS ATQRKIKQQYD LVK N SKGLT+ QVG+F NCL+EARN+LQHK
Sbjct: 160  KQELVCLYPFTSSSS-ATQRKIKQQYDHLVKCNESKGLTLAQVGDFANCLIEARNELQHK 218

Query: 692  SEAIKRKFTITKALLLKAHRSSFDRLSQQLHKLEAEQKRLEEDANIYNRLQQQLKLSPAY 871
            SE IKRKFTITKALLLKA RSS DRL QQ++KLE EQKRLEED  +YN LQQQLKLSPAY
Sbjct: 219  SEVIKRKFTITKALLLKADRSSIDRLRQQIYKLELEQKRLEEDTFVYNWLQQQLKLSPAY 278

Query: 872  KKMLEVGARMELKASSDQLTKNMDSE---ISFEELLAREKKDSFWQKNGKLR 1018
            KKMLE+ A MELKA S +L ++ ++E   ISFEELLA+EKKD FWQKNGK R
Sbjct: 279  KKMLEISACMELKAKSGELIESSNTEVADISFEELLAQEKKDVFWQKNGKSR 330


>ref|NP_564031.2| uncharacterized protein [Arabidopsis thaliana]
            gi|332191498|gb|AEE29619.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 338

 Score =  243 bits (619), Expect = 1e-61
 Identities = 125/169 (73%), Positives = 142/169 (84%), Gaps = 3/169 (1%)
 Frame = +2

Query: 527  CLYPFTSSSSSATQRKIKQQYDQLVKSNGSKGLTMVQVGEFVNCLVEARNDLQHKSEAIK 706
            CLYPFTS+SS ATQRKIKQQYDQLVK N +KGLT+ QVGEF NCL+EA+N+LQHKSE IK
Sbjct: 169  CLYPFTSTSS-ATQRKIKQQYDQLVKCNNAKGLTLAQVGEFANCLIEAKNELQHKSEVIK 227

Query: 707  RKFTITKALLLKAHRSSFDRLSQQLHKLEAEQKRLEEDANIYNRLQQQLKLSPAYKKMLE 886
            RKF+ITKALL KA RSSFDRL QQ++KLE EQKR+EEDA +YN LQQQLKLSPAYKK+LE
Sbjct: 228  RKFSITKALLFKADRSSFDRLRQQIYKLEMEQKRVEEDALVYNWLQQQLKLSPAYKKVLE 287

Query: 887  VGARMELKASSDQLTKNMD---SEISFEELLAREKKDSFWQKNGKLRSC 1024
            + A MELK  S     N D   S+ISFEELL +EKKDSFW KNG+LR+C
Sbjct: 288  ISASMELKDKSSTELDNPDDEFSDISFEELLEQEKKDSFWHKNGRLRTC 336


>gb|ABB83615.1| CA-responsive protein [Brassica oleracea]
          Length = 328

 Score =  235 bits (600), Expect = 2e-59
 Identities = 123/180 (68%), Positives = 145/180 (80%), Gaps = 3/180 (1%)
 Frame = +2

Query: 494  VTDLQHKHCLDCLYPFTSSSSSATQRKIKQQYDQLVKSNGSKGLTMVQVGEFVNCLVEAR 673
            V  L+ K    CLYPFTSSSS ATQRKIKQQYD LVK N +KGLT+ QVGEF NCL+EA+
Sbjct: 147  VPKLETKPEFVCLYPFTSSSS-ATQRKIKQQYDHLVKCNSAKGLTLAQVGEFANCLIEAK 205

Query: 674  NDLQHKSEAIKRKFTITKALLLKAHRSSFDRLSQQLHKLEAEQKRLEEDANIYNRLQQQL 853
            N+LQ+KSE IKRK++ITKALL KA RSSFDRL QQ++KLE EQKR++EDA +YN LQQQL
Sbjct: 206  NELQNKSEVIKRKYSITKALLFKADRSSFDRLRQQIYKLEMEQKRVQEDALVYNWLQQQL 265

Query: 854  KLSPAYKKMLEVGARMELKASSDQLTKNMD---SEISFEELLAREKKDSFWQKNGKLRSC 1024
            KLSPAYKK+LE+ A MELK  +     + D   S+ISFEELL +EKKDSFW KNG+LR+C
Sbjct: 266  KLSPAYKKVLEISASMELKDKTSTELDSQDDEVSDISFEELLEQEKKDSFWHKNGRLRTC 325


>ref|XP_004155935.1| PREDICTED: uncharacterized protein LOC101226583 [Cucumis sativus]
          Length = 347

 Score =  229 bits (584), Expect = 1e-57
 Identities = 120/173 (69%), Positives = 141/173 (81%), Gaps = 3/173 (1%)
 Frame = +2

Query: 521  LDCLYPFTSSSSSATQRKIKQQYDQLVKSNGSKGLTMVQVGEFVNCLVEARNDLQHKSEA 700
            L  LYPFTSS+S   QRKIK+QYD+L+K   SK LT+ QV +F NCL+ AR+ LQHK++ 
Sbjct: 176  LTLLYPFTSSTS-VIQRKIKRQYDELMKCQESKELTLAQVRQFANCLINARSKLQHKADV 234

Query: 701  IKRKFTITKALLLKAHRSSFDRLSQQLHKLEAEQKRLEEDANIYNRLQQQLKLSPAYKKM 880
            I RKFTITKALL KA RSSFDRL QQ++KLE EQKRLEED  +YN LQQQLKLSPAYKKM
Sbjct: 235  IHRKFTITKALLYKADRSSFDRLQQQIYKLELEQKRLEEDTFVYNWLQQQLKLSPAYKKM 294

Query: 881  LEVGARMELKASSDQLTKNMDSE---ISFEELLAREKKDSFWQKNGKLRSCMS 1030
            LE+G  MEL A S++ T+N+DSE   +SFEELLA+EKKDSFWQ+NGKLRSC S
Sbjct: 295  LEIGTCMELMAKSEKPTENIDSEFTDMSFEELLAQEKKDSFWQRNGKLRSCSS 347


Top