BLASTX nr result

ID: Coptis24_contig00007604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007604
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26390.3| unnamed protein product [Vitis vinifera]              239   7e-61
emb|CBI23576.3| unnamed protein product [Vitis vinifera]              233   3e-59
ref|XP_002529320.1| cellulose synthase, putative [Ricinus commun...   232   9e-59
ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G...   230   3e-58
ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic su...   230   3e-58

>emb|CBI26390.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  239 bits (609), Expect = 7e-61
 Identities = 116/227 (51%), Positives = 156/227 (68%)
 Frame = +3

Query: 168 LRVSGLISNAPYLLVLDCDMNCNDPMSARQAMCFILDPMISKELAFVQFPQYFHNISEND 347
           LRVSGLISN+PY+L+LDCDM CNDP SA++AMCF LDP IS  LAFVQFPQ FHNIS+ND
Sbjct: 79  LRVSGLISNSPYILILDCDMYCNDPTSAQKAMCFHLDPKISPTLAFVQFPQRFHNISKND 138

Query: 348 IYNSQMRTFFKVCCYGLDGLMGPFLCGTGFFLKREALYKNSVEEDINLLQAKKWLAKKYF 527
           IY+S +R+ F +   GLDGL GP LCGT F++KR A Y + +++DI++L+      ++ F
Sbjct: 139 IYDSGVRSAFSILLEGLDGLQGPILCGTCFYIKRVAFYGSFIQDDIDILK-----LRESF 193

Query: 528 GTSNELIASISGDSRHHNIIENEDASNKLLDEARIVASGTYEQHTQWGRQIGFRYHSLVE 707
           G SNE I S+  + +     +    S   L E +++AS +YE  T+WG+++GF Y S+VE
Sbjct: 194 GPSNEFIRSLGQNYKPSVSKDGNSLSTIQLQETQLLASCSYENQTKWGKEVGFLYQSVVE 253

Query: 708 DVLTGMLLHTKGWTSVYYDPPQPAFXXXXXXXXXXXXVQNTRWNSGL 848
           D LTG ++H +GWTSVY +P +P F            VQ TRW+SGL
Sbjct: 254 DYLTGFIMHCRGWTSVYCNPSKPQFLGSGVTNMNDMLVQGTRWSSGL 300


>emb|CBI23576.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  233 bits (595), Expect = 3e-59
 Identities = 120/229 (52%), Positives = 152/229 (66%), Gaps = 2/229 (0%)
 Frame = +3

Query: 168 LRVSGLISNAPYLLVLDCDMNCNDPMSARQAMCFILDPMISKELAFVQFPQYFHNISEND 347
           LRVSG+ISNAP++LVLDCD  CNDP SARQAMCF LD  IS  LAFVQFPQ FHN S ND
Sbjct: 302 LRVSGIISNAPHVLVLDCDFFCNDPSSARQAMCFHLDSKISCSLAFVQFPQKFHNFSMND 361

Query: 348 IYNSQMRTFFKVCCYGLDGLMGPFLCGTGFFLKREALYKN--SVEEDINLLQAKKWLAKK 521
           IY+ ++R+ F++ C G+DG  GP L GT F++KR ALY N   V++ + L        K+
Sbjct: 362 IYDGRLRSVFEMKCPGMDGHQGPMLSGTCFYIKRAALYGNVGEVKDPLQL--------KQ 413

Query: 522 YFGTSNELIASISGDSRHHNIIENEDASNKLLDEARIVASGTYEQHTQWGRQIGFRYHSL 701
           YFG SN LI S+ G S    +IE+   S +L  E + +AS +YE+HT+WG +IGF Y+S+
Sbjct: 414 YFGPSNGLIKSL-GQSYPCKVIEDGSFSTRLQQETQFLASCSYEEHTKWGEEIGFLYNSV 472

Query: 702 VEDVLTGMLLHTKGWTSVYYDPPQPAFXXXXXXXXXXXXVQNTRWNSGL 848
           +ED  TG +LH KGW S+YY PP+PAF            VQ  RW  GL
Sbjct: 473 LEDYFTGFILHCKGWNSIYYSPPRPAFLGTATSNLNDTLVQGRRWYCGL 521


>ref|XP_002529320.1| cellulose synthase, putative [Ricinus communis]
           gi|223531244|gb|EEF33089.1| cellulose synthase, putative
           [Ricinus communis]
          Length = 711

 Score =  232 bits (591), Expect = 9e-59
 Identities = 120/227 (52%), Positives = 145/227 (63%)
 Frame = +3

Query: 168 LRVSGLISNAPYLLVLDCDMNCNDPMSARQAMCFILDPMISKELAFVQFPQYFHNISEND 347
           LRVSG+I+N+PYLLVLDCDM CNDP SARQAMCF LDP IS  LAFVQFPQ F+NIS++D
Sbjct: 272 LRVSGIITNSPYLLVLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFYNISKSD 331

Query: 348 IYNSQMRTFFKVCCYGLDGLMGPFLCGTGFFLKREALYKNSVEEDINLLQAKKWLAKKYF 527
           IY++Q+RT F +   G+DGL GP L GTGF++KR ALY N                    
Sbjct: 332 IYDAQIRTLFVIMWPGVDGLQGPILSGTGFYIKRNALYDN-------------------- 371

Query: 528 GTSNELIASISGDSRHHNIIENEDASNKLLDEARIVASGTYEQHTQWGRQIGFRYHSLVE 707
                 ++     S  HNI +N  +S KLL EA+ +A   YEQHT WG+QIGF Y S+VE
Sbjct: 372 ------LSFKIHYSNQHNIHDNRYSSGKLLQEAQFLAKSIYEQHTLWGQQIGFLYGSVVE 425

Query: 708 DVLTGMLLHTKGWTSVYYDPPQPAFXXXXXXXXXXXXVQNTRWNSGL 848
           D  TGM+LH KGWTSV+ +P  PAF            +Q TRW SGL
Sbjct: 426 DYFTGMILHCKGWTSVFCNPSIPAFLGSATTKLNDTLIQGTRWYSGL 472


>ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 733

 Score =  230 bits (587), Expect = 3e-58
 Identities = 119/227 (52%), Positives = 151/227 (66%)
 Frame = +3

Query: 168 LRVSGLISNAPYLLVLDCDMNCNDPMSARQAMCFILDPMISKELAFVQFPQYFHNISEND 347
           LRVS +ISN+PY+LVLDCDM CNDP S RQAMC  LDP++S  LAFVQFPQ FHNIS ND
Sbjct: 272 LRVSSMISNSPYILVLDCDMYCNDPASVRQAMCCHLDPILSPSLAFVQFPQRFHNISSND 331

Query: 348 IYNSQMRTFFKVCCYGLDGLMGPFLCGTGFFLKREALYKNSVEEDINLLQAKKWLAKKYF 527
           IY+SQMR+ F     G+DGL GP L GTGF++KR ALY  S++ D +L +      ++ F
Sbjct: 332 IYDSQMRSAFSTLWEGMDGLDGPVLSGTGFYMKRVALYGTSIQGDTSLTE-----LRQTF 386

Query: 528 GTSNELIASISGDSRHHNIIENEDASNKLLDEARIVASGTYEQHTQWGRQIGFRYHSLVE 707
           G S+E I S+S      NI    D+ + +L EAR++AS  +E  T+WG ++G  YHS+ E
Sbjct: 387 GYSDEFIKSLS-PKYLPNISNGGDSVSVILKEARLLASCQFENQTKWGEEVGVLYHSVSE 445

Query: 708 DVLTGMLLHTKGWTSVYYDPPQPAFXXXXXXXXXXXXVQNTRWNSGL 848
           DV+TG  LH KGWTSV+  P +P F            VQ TRW+SGL
Sbjct: 446 DVVTGYTLHCKGWTSVFCVPSRPQFVGSSVTNLNDLLVQGTRWSSGL 492


>ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like, partial [Vitis vinifera]
          Length = 550

 Score =  230 bits (587), Expect = 3e-58
 Identities = 116/227 (51%), Positives = 152/227 (66%)
 Frame = +3

Query: 168 LRVSGLISNAPYLLVLDCDMNCNDPMSARQAMCFILDPMISKELAFVQFPQYFHNISEND 347
           LRVSGLISN+PY+L+LDCDM CNDP SA++AMCF LDP IS  LAFVQFPQ FHNIS+ND
Sbjct: 275 LRVSGLISNSPYILILDCDMYCNDPTSAQKAMCFHLDPKISPTLAFVQFPQRFHNISKND 334

Query: 348 IYNSQMRTFFKVCCYGLDGLMGPFLCGTGFFLKREALYKNSVEEDINLLQAKKWLAKKYF 527
           IY+S +R+ F +   GLDGL GP LCGT F++KR A Y N     I++L+      ++ F
Sbjct: 335 IYDSGVRSAFSILLEGLDGLQGPILCGTCFYIKRVAFYGN-----IDILK-----LRESF 384

Query: 528 GTSNELIASISGDSRHHNIIENEDASNKLLDEARIVASGTYEQHTQWGRQIGFRYHSLVE 707
           G SNE I S+  + +     +    S   L E +++AS +YE  T+WG+++GF Y S+VE
Sbjct: 385 GPSNEFIRSLGQNYKPSVSKDGNSLSTIQLQETQLLASCSYENQTKWGKEVGFLYQSVVE 444

Query: 708 DVLTGMLLHTKGWTSVYYDPPQPAFXXXXXXXXXXXXVQNTRWNSGL 848
           D LTG ++H +GWTSVY +P +P F            VQ TRW+SGL
Sbjct: 445 DYLTGFIMHCRGWTSVYCNPSKPQFLGSGVTNMNDMLVQGTRWSSGL 491


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