BLASTX nr result
ID: Coptis24_contig00007591
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007591
(760 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275878.2| PREDICTED: uncharacterized protein LOC100251... 94 3e-32
ref|XP_002530898.1| transcription factor, putative [Ricinus comm... 91 4e-30
emb|CAN59914.1| hypothetical protein VITISV_006086 [Vitis vinifera] 94 3e-29
ref|XP_003545161.1| PREDICTED: uncharacterized protein LOC100817... 88 2e-28
emb|CBI24237.3| unnamed protein product [Vitis vinifera] 94 2e-26
>ref|XP_002275878.2| PREDICTED: uncharacterized protein LOC100251674 [Vitis vinifera]
Length = 445
Score = 94.0 bits (232), Expect(2) = 3e-32
Identities = 63/143 (44%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Frame = -2
Query: 759 RRERHQLXXXXXXXXXXXXXXXVKKPRLI-NXXXXXXXXXXXXXTPPRSFDTSSSHQGIY 583
RRER + KKPRLI + TPPRSFDTSSSHQ
Sbjct: 274 RRERQLMVSVTPGAGSSGSTSGAKKPRLITSQTTTTSHTSTSNTTPPRSFDTSSSHQ--- 330
Query: 582 LFHFL*VRIXXXXXXXXXXXXXXXFVIL*VFWNVDASFKEALPGQVRVPAVLKCVRVTAI 403
DASFKEALPGQVR PAV KCVRVTA+
Sbjct: 331 ----------------------------------DASFKEALPGQVRAPAVFKCVRVTAV 356
Query: 402 GDGEDEYAYQAVVKIGGMCLRDF 334
DGEDEYAYQAVVKIGG + F
Sbjct: 357 DDGEDEYAYQAVVKIGGHVFKGF 379
Score = 71.2 bits (173), Expect(2) = 3e-32
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Frame = -1
Query: 349 VFKGFLYDQGMEGREGFPNISELHL---XXXXXXXXXXXXXXXTPIIDPA-VFAASQGAL 182
VFKGFLYDQG+E R+GFPNISELHL +PI+DP ++AAS G L
Sbjct: 375 VFKGFLYDQGLETRDGFPNISELHLGGGSGSGGGGGARNGGTSSPILDPPDIYAASGGGL 434
Query: 181 LGGTTFGNTIN 149
LGG+++GN IN
Sbjct: 435 LGGSSYGNAIN 445
>ref|XP_002530898.1| transcription factor, putative [Ricinus communis]
gi|223529520|gb|EEF31474.1| transcription factor,
putative [Ricinus communis]
Length = 344
Score = 91.3 bits (225), Expect(2) = 4e-30
Identities = 58/120 (48%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = -2
Query: 690 KKPRLINXXXXXXXXXXXXXT-PPRSFDTSSSHQGIYLFHFL*VRIXXXXXXXXXXXXXX 514
KKPRL+N T PPRSFDTSSSHQ
Sbjct: 196 KKPRLLNSQTTTTSHTSTSNTTPPRSFDTSSSHQ-------------------------- 229
Query: 513 XFVIL*VFWNVDASFKEALPGQVRVPAVLKCVRVTAIGDGEDEYAYQAVVKIGGMCLRDF 334
D SFKEALPGQVR PAV KCVRVTA+ DGEDEYAYQAVVKIGG + F
Sbjct: 230 -----------DVSFKEALPGQVRAPAVFKCVRVTAMDDGEDEYAYQAVVKIGGHVFKGF 278
Score = 66.6 bits (161), Expect(2) = 4e-30
Identities = 38/71 (53%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = -1
Query: 349 VFKGFLYDQGMEGREGFPNISELHL--XXXXXXXXXXXXXXXTPIIDPA--VFAASQGAL 182
VFKGFLYDQG+E R+GFPNISELHL +PIIDP+ AAS G L
Sbjct: 274 VFKGFLYDQGVETRDGFPNISELHLGGASSGGDGGGRNGASSSPIIDPSDVYGAASGGGL 333
Query: 181 LGGTTFGNTIN 149
LGG+ +GN +N
Sbjct: 334 LGGSAYGNPMN 344
>emb|CAN59914.1| hypothetical protein VITISV_006086 [Vitis vinifera]
Length = 356
Score = 94.0 bits (232), Expect(2) = 3e-29
Identities = 63/143 (44%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Frame = -2
Query: 759 RRERHQLXXXXXXXXXXXXXXXVKKPRLI-NXXXXXXXXXXXXXTPPRSFDTSSSHQGIY 583
RRER + KKPRLI + TPPRSFDTSSSHQ
Sbjct: 190 RRERQLMVSVTPGAGSSGSTSGAKKPRLITSQTTTTSHTSTSNTTPPRSFDTSSSHQ--- 246
Query: 582 LFHFL*VRIXXXXXXXXXXXXXXXFVIL*VFWNVDASFKEALPGQVRVPAVLKCVRVTAI 403
DASFKEALPGQVR PAV KCVRVTA+
Sbjct: 247 ----------------------------------DASFKEALPGQVRAPAVFKCVRVTAV 272
Query: 402 GDGEDEYAYQAVVKIGGMCLRDF 334
DGEDEYAYQAVVKIGG + F
Sbjct: 273 DDGEDEYAYQAVVKIGGHVFKGF 295
Score = 61.2 bits (147), Expect(2) = 3e-29
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Frame = -1
Query: 349 VFKGFLYDQGMEGREGFPNISELHL---XXXXXXXXXXXXXXXTPIIDPA-VFAASQGAL 182
VFKGFLYDQG+E R+GFPNISELHL +PI+DP +AAS G L
Sbjct: 291 VFKGFLYDQGLETRDGFPNISELHLGGGSGSGGGGGARNGGTSSPILDPPDXYAASGGGL 350
Query: 181 LGGTTF 164
LGG+++
Sbjct: 351 LGGSSY 356
>ref|XP_003545161.1| PREDICTED: uncharacterized protein LOC100817745 [Glycine max]
Length = 415
Score = 88.2 bits (217), Expect(2) = 2e-28
Identities = 56/120 (46%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = -2
Query: 690 KKPRLI-NXXXXXXXXXXXXXTPPRSFDTSSSHQGIYLFHFL*VRIXXXXXXXXXXXXXX 514
KKPRLI + TPPRSFDTSSSHQ
Sbjct: 269 KKPRLIASQTTTTSHTSTSNTTPPRSFDTSSSHQ-------------------------- 302
Query: 513 XFVIL*VFWNVDASFKEALPGQVRVPAVLKCVRVTAIGDGEDEYAYQAVVKIGGMCLRDF 334
DA FKE+LPGQVR PAV KCVRVTA+ DG+DEYAYQAVVKIGG + F
Sbjct: 303 -----------DAGFKESLPGQVRAPAVFKCVRVTAVEDGQDEYAYQAVVKIGGHVFKGF 351
Score = 63.9 bits (154), Expect(2) = 2e-28
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Frame = -1
Query: 349 VFKGFLYDQGMEGREGFPNISELHLXXXXXXXXXXXXXXXTPIIDP-AVFAASQGALLGG 173
VFKGFLYDQG+E R+ +PN+SELHL +P++DP V+AAS G LLGG
Sbjct: 347 VFKGFLYDQGVENRDVYPNLSELHLGGGSGGAGRNGVSSSSPMMDPNDVYAASGGGLLGG 406
Query: 172 TT-FGNTIN 149
++ +GN +N
Sbjct: 407 SSAYGNPMN 415
>emb|CBI24237.3| unnamed protein product [Vitis vinifera]
Length = 277
Score = 94.0 bits (232), Expect(2) = 2e-26
Identities = 63/143 (44%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Frame = -2
Query: 759 RRERHQLXXXXXXXXXXXXXXXVKKPRLI-NXXXXXXXXXXXXXTPPRSFDTSSSHQGIY 583
RRER + KKPRLI + TPPRSFDTSSSHQ
Sbjct: 142 RRERQLMVSVTPGAGSSGSTSGAKKPRLITSQTTTTSHTSTSNTTPPRSFDTSSSHQ--- 198
Query: 582 LFHFL*VRIXXXXXXXXXXXXXXXFVIL*VFWNVDASFKEALPGQVRVPAVLKCVRVTAI 403
DASFKEALPGQVR PAV KCVRVTA+
Sbjct: 199 ----------------------------------DASFKEALPGQVRAPAVFKCVRVTAV 224
Query: 402 GDGEDEYAYQAVVKIGGMCLRDF 334
DGEDEYAYQAVVKIGG + F
Sbjct: 225 DDGEDEYAYQAVVKIGGHVFKGF 247
Score = 51.2 bits (121), Expect(2) = 2e-26
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = -1
Query: 349 VFKGFLYDQGMEGREGFPNISELHL 275
VFKGFLYDQG+E R+GFPNISELHL
Sbjct: 243 VFKGFLYDQGLETRDGFPNISELHL 267