BLASTX nr result
ID: Coptis24_contig00007590
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007590 (573 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275512.1| PREDICTED: uncharacterized protein LOC100266... 100 1e-19 ref|XP_002511615.1| conserved hypothetical protein [Ricinus comm... 91 2e-16 ref|XP_002327010.1| predicted protein [Populus trichocarpa] gi|2... 84 2e-14 gb|AFW59286.1| hypothetical protein ZEAMMB73_316447 [Zea mays] 83 4e-14 ref|XP_002446895.1| hypothetical protein SORBIDRAFT_06g024500 [S... 83 4e-14 >ref|XP_002275512.1| PREDICTED: uncharacterized protein LOC100266789 [Vitis vinifera] Length = 95 Score = 100 bits (250), Expect = 1e-19 Identities = 55/95 (57%), Positives = 65/95 (68%) Frame = +3 Query: 48 SNHGSGDGVEGYWWWALASTTQAVTGVITYRRGRRIESSSYTIPFKAFFVASLIVGAGAT 227 + HGSGDG +WWWALAS Q GV +YRRG +SS +P KAF VASL VGA A+ Sbjct: 4 NGHGSGDG--SHWWWALASAAQLGWGVFSYRRGGVGDSS--LMPVKAFGVASLFVGAAAS 59 Query: 228 AVAGCLNASGIHKIEDLKVVGRNLRNELRVPPRDT 332 A G L+ASGIHK+EDLK +G N+R L V PR T Sbjct: 60 AAFGVLHASGIHKVEDLKEMGANIRTGLGVRPRGT 94 >ref|XP_002511615.1| conserved hypothetical protein [Ricinus communis] gi|223548795|gb|EEF50284.1| conserved hypothetical protein [Ricinus communis] Length = 98 Score = 90.5 bits (223), Expect = 2e-16 Identities = 45/94 (47%), Positives = 59/94 (62%) Frame = +3 Query: 45 SSNHGSGDGVEGYWWWALASTTQAVTGVITYRRGRRIESSSYTIPFKAFFVASLIVGAGA 224 +S G +WWWALASTTQ + G+ +YR+G S +PFKAF VASL VG+ A Sbjct: 3 ASESGGDSERRQWWWWALASTTQLLWGISSYRKG--YAGDSRLMPFKAFAVASLFVGSAA 60 Query: 225 TAVAGCLNASGIHKIEDLKVVGRNLRNELRVPPR 326 + L ASG+HK+EDL V+G N+R L +P R Sbjct: 61 SGSFAALQASGVHKVEDLVVIGTNVRTGLGIPSR 94 >ref|XP_002327010.1| predicted protein [Populus trichocarpa] gi|222835325|gb|EEE73760.1| predicted protein [Populus trichocarpa] Length = 102 Score = 84.0 bits (206), Expect = 2e-14 Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 2/93 (2%) Frame = +3 Query: 54 HGSGDGVE--GYWWWALASTTQAVTGVITYRRGRRIESSSYTIPFKAFFVASLIVGAGAT 227 +G G G+E +WWWA+AS + G+ Y+RG S +P KAF VASL VG+ A+ Sbjct: 3 NGCGGGIETQWWWWWAMASMAKFGWGISAYKRG--FAGDSRLMPLKAFAVASLFVGSAAS 60 Query: 228 AVAGCLNASGIHKIEDLKVVGRNLRNELRVPPR 326 A L ASGIHK++DL +G N+R L VPPR Sbjct: 61 ASIASLQASGIHKVQDLIELGANIRTGLGVPPR 93 >gb|AFW59286.1| hypothetical protein ZEAMMB73_316447 [Zea mays] Length = 140 Score = 82.8 bits (203), Expect = 4e-14 Identities = 41/92 (44%), Positives = 60/92 (65%) Frame = +3 Query: 51 NHGSGDGVEGYWWWALASTTQAVTGVITYRRGRRIESSSYTIPFKAFFVASLIVGAGATA 230 + G G + + WWA AS QA G+ +RRGR ++ +PFKAF +ASLIVG+GATA Sbjct: 45 DRGGGGDAKRWPWWAAASAAQAAAGLAWFRRGR--SGTAVAMPFKAFGIASLIVGSGATA 102 Query: 231 VAGCLNASGIHKIEDLKVVGRNLRNELRVPPR 326 VA + A+G+ +E++K VG ++R + PPR Sbjct: 103 VAAGVLAAGVGSVEEMKGVGASIRRWMGAPPR 134 >ref|XP_002446895.1| hypothetical protein SORBIDRAFT_06g024500 [Sorghum bicolor] gi|241938078|gb|EES11223.1| hypothetical protein SORBIDRAFT_06g024500 [Sorghum bicolor] Length = 100 Score = 82.8 bits (203), Expect = 4e-14 Identities = 42/90 (46%), Positives = 58/90 (64%) Frame = +3 Query: 57 GSGDGVEGYWWWALASTTQAVTGVITYRRGRRIESSSYTIPFKAFFVASLIVGAGATAVA 236 G G E + WWA AS QA GV +RRGR ++ +PFKAF +ASL VGAGATAV+ Sbjct: 7 GGGGEAERWPWWAAASAAQAAAGVAWFRRGRG--GTAVAMPFKAFAIASLFVGAGATAVS 64 Query: 237 GCLNASGIHKIEDLKVVGRNLRNELRVPPR 326 + A+G+ +E++K VG ++R + PPR Sbjct: 65 AGVLAAGVGSVEEMKGVGASIRRWMGAPPR 94