BLASTX nr result

ID: Coptis24_contig00007578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007578
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis ...   165   3e-39
emb|CBI23542.3| unnamed protein product [Vitis vinifera]              165   3e-39
ref|XP_002304305.1| predicted protein [Populus trichocarpa] gi|1...   164   6e-39
gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]           164   8e-39
gb|ABK22540.1| unknown [Picea sitchensis] gi|116784933|gb|ABK235...   164   1e-38

>ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
          Length = 207

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/91 (89%), Positives = 85/91 (93%)
 Frame = -2

Query: 535 NVNKLLVGNKCDMTANKVVSYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 356
           NVNKLLVGNKCD+TANKVVSYETAKAFADEIGIPF+ETSAKNATNVEQAFM MAAEIKNR
Sbjct: 117 NVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNR 176

Query: 355 MASQPAMNANRPATVQMRGQPVGQKANCCSS 263
           MASQPAMN  RP TVQ+RGQPV QK+ CCSS
Sbjct: 177 MASQPAMNTARPPTVQIRGQPVNQKSGCCSS 207


>emb|CBI23542.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/91 (89%), Positives = 85/91 (93%)
 Frame = -2

Query: 535 NVNKLLVGNKCDMTANKVVSYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 356
           NVNKLLVGNKCD+TANKVVSYETAKAFADEIGIPF+ETSAKNATNVEQAFM MAAEIKNR
Sbjct: 108 NVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNR 167

Query: 355 MASQPAMNANRPATVQMRGQPVGQKANCCSS 263
           MASQPAMN  RP TVQ+RGQPV QK+ CCSS
Sbjct: 168 MASQPAMNTARPPTVQIRGQPVNQKSGCCSS 198


>ref|XP_002304305.1| predicted protein [Populus trichocarpa] gi|118485751|gb|ABK94725.1|
           unknown [Populus trichocarpa]
           gi|222841737|gb|EEE79284.1| predicted protein [Populus
           trichocarpa]
          Length = 203

 Score =  164 bits (416), Expect = 6e-39
 Identities = 81/91 (89%), Positives = 85/91 (93%)
 Frame = -2

Query: 535 NVNKLLVGNKCDMTANKVVSYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 356
           NVNKLLVGNKCD+TANKVVSYETAKAFADEIGIPF+ETSAKNATNVEQAFM MAAEIKNR
Sbjct: 113 NVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNR 172

Query: 355 MASQPAMNANRPATVQMRGQPVGQKANCCSS 263
           MASQPAMN  RP TVQ+RGQPV QK+ CCSS
Sbjct: 173 MASQPAMNNARPPTVQIRGQPVNQKSGCCSS 203


>gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
          Length = 202

 Score =  164 bits (415), Expect = 8e-39
 Identities = 80/90 (88%), Positives = 87/90 (96%)
 Frame = -2

Query: 535 NVNKLLVGNKCDMTANKVVSYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 356
           NVNKLLVGNKCD+ AN+VVSYET KAFADEIGIPFLETSAK+ATNVE+AFMTMAAEIKNR
Sbjct: 113 NVNKLLVGNKCDLAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEIKNR 172

Query: 355 MASQPAMNANRPATVQMRGQPVGQKANCCS 266
           MASQPAMNA+RPATVQMRGQPV QK++CCS
Sbjct: 173 MASQPAMNASRPATVQMRGQPVTQKSSCCS 202


>gb|ABK22540.1| unknown [Picea sitchensis] gi|116784933|gb|ABK23527.1| unknown
           [Picea sitchensis] gi|224284724|gb|ACN40093.1| unknown
           [Picea sitchensis]
          Length = 202

 Score =  164 bits (414), Expect = 1e-38
 Identities = 79/90 (87%), Positives = 86/90 (95%)
 Frame = -2

Query: 535 NVNKLLVGNKCDMTANKVVSYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 356
           NVNKLLVGNKCD+TAN+ V Y+TAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR
Sbjct: 113 NVNKLLVGNKCDLTANRAVDYDTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 172

Query: 355 MASQPAMNANRPATVQMRGQPVGQKANCCS 266
           MASQPAMN++RPATVQM+GQPV QK+ CCS
Sbjct: 173 MASQPAMNSSRPATVQMKGQPVVQKSGCCS 202


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