BLASTX nr result
ID: Coptis24_contig00007578
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007578 (536 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis ... 165 3e-39 emb|CBI23542.3| unnamed protein product [Vitis vinifera] 165 3e-39 ref|XP_002304305.1| predicted protein [Populus trichocarpa] gi|1... 164 6e-39 gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis] 164 8e-39 gb|ABK22540.1| unknown [Picea sitchensis] gi|116784933|gb|ABK235... 164 1e-38 >ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera] Length = 207 Score = 165 bits (418), Expect = 3e-39 Identities = 81/91 (89%), Positives = 85/91 (93%) Frame = -2 Query: 535 NVNKLLVGNKCDMTANKVVSYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 356 NVNKLLVGNKCD+TANKVVSYETAKAFADEIGIPF+ETSAKNATNVEQAFM MAAEIKNR Sbjct: 117 NVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNR 176 Query: 355 MASQPAMNANRPATVQMRGQPVGQKANCCSS 263 MASQPAMN RP TVQ+RGQPV QK+ CCSS Sbjct: 177 MASQPAMNTARPPTVQIRGQPVNQKSGCCSS 207 >emb|CBI23542.3| unnamed protein product [Vitis vinifera] Length = 198 Score = 165 bits (418), Expect = 3e-39 Identities = 81/91 (89%), Positives = 85/91 (93%) Frame = -2 Query: 535 NVNKLLVGNKCDMTANKVVSYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 356 NVNKLLVGNKCD+TANKVVSYETAKAFADEIGIPF+ETSAKNATNVEQAFM MAAEIKNR Sbjct: 108 NVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNR 167 Query: 355 MASQPAMNANRPATVQMRGQPVGQKANCCSS 263 MASQPAMN RP TVQ+RGQPV QK+ CCSS Sbjct: 168 MASQPAMNTARPPTVQIRGQPVNQKSGCCSS 198 >ref|XP_002304305.1| predicted protein [Populus trichocarpa] gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa] gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa] Length = 203 Score = 164 bits (416), Expect = 6e-39 Identities = 81/91 (89%), Positives = 85/91 (93%) Frame = -2 Query: 535 NVNKLLVGNKCDMTANKVVSYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 356 NVNKLLVGNKCD+TANKVVSYETAKAFADEIGIPF+ETSAKNATNVEQAFM MAAEIKNR Sbjct: 113 NVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNR 172 Query: 355 MASQPAMNANRPATVQMRGQPVGQKANCCSS 263 MASQPAMN RP TVQ+RGQPV QK+ CCSS Sbjct: 173 MASQPAMNNARPPTVQIRGQPVNQKSGCCSS 203 >gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis] Length = 202 Score = 164 bits (415), Expect = 8e-39 Identities = 80/90 (88%), Positives = 87/90 (96%) Frame = -2 Query: 535 NVNKLLVGNKCDMTANKVVSYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 356 NVNKLLVGNKCD+ AN+VVSYET KAFADEIGIPFLETSAK+ATNVE+AFMTMAAEIKNR Sbjct: 113 NVNKLLVGNKCDLAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEIKNR 172 Query: 355 MASQPAMNANRPATVQMRGQPVGQKANCCS 266 MASQPAMNA+RPATVQMRGQPV QK++CCS Sbjct: 173 MASQPAMNASRPATVQMRGQPVTQKSSCCS 202 >gb|ABK22540.1| unknown [Picea sitchensis] gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis] gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis] Length = 202 Score = 164 bits (414), Expect = 1e-38 Identities = 79/90 (87%), Positives = 86/90 (95%) Frame = -2 Query: 535 NVNKLLVGNKCDMTANKVVSYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 356 NVNKLLVGNKCD+TAN+ V Y+TAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR Sbjct: 113 NVNKLLVGNKCDLTANRAVDYDTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNR 172 Query: 355 MASQPAMNANRPATVQMRGQPVGQKANCCS 266 MASQPAMN++RPATVQM+GQPV QK+ CCS Sbjct: 173 MASQPAMNSSRPATVQMKGQPVVQKSGCCS 202