BLASTX nr result

ID: Coptis24_contig00007574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007574
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276483.1| PREDICTED: uncharacterized protein LOC100243...   222   5e-56
ref|XP_003608075.1| hypothetical protein MTR_4g087380 [Medicago ...   210   2e-52
emb|CAN69676.1| hypothetical protein VITISV_027733 [Vitis vinifera]   210   2e-52
ref|XP_003520180.1| PREDICTED: uncharacterized protein LOC100813...   208   7e-52
ref|XP_003608076.1| hypothetical protein MTR_4g087380 [Medicago ...   207   2e-51

>ref|XP_002276483.1| PREDICTED: uncharacterized protein LOC100243911 [Vitis vinifera]
          Length = 201

 Score =  222 bits (566), Expect = 5e-56
 Identities = 118/201 (58%), Positives = 142/201 (70%), Gaps = 34/201 (16%)
 Frame = +2

Query: 86  MQDPKKSHRRKSWYQRAMEIATLWKSILKPIELPTRSS---------------------- 199
           MQDPK  + RK WYQRAME+ATLWK+I K  E+PT ++                      
Sbjct: 1   MQDPKNPNTRKPWYQRAMEMATLWKTISKSTEIPTANTTLWKTISKSAAIRTTTTTTTTT 60

Query: 200 ----KPRLKKSTSLSVATSFTRVCLCAPISSYNEVFQADVPPRRSNSYPRTKSLMVPSKR 367
               + +L+K TSL VATSFTRVCLCAPISSY EVF+A++PPRRSNSYPR+K    P +R
Sbjct: 61  TNPHRQKLRKCTSLRVATSFTRVCLCAPISSYTEVFRAELPPRRSNSYPRSKPFPSPQER 120

Query: 368 FTNVRINTENN--------KVFRGKSLNDDVLMRRFVVEEKAMMHFRRRNQIEVIRKRST 523
            +N RI+ E +        +VFRGKSL DDVLMRRFVVEE+AM+  RRRNQ+EVIR+RS 
Sbjct: 121 ISNARISMEGSARVSAEGRRVFRGKSLTDDVLMRRFVVEEEAMIQVRRRNQMEVIRRRSA 180

Query: 524 MRRKKLGPSPLSRVVMAEDEE 586
           MRRKKLGPSPLSR+VMAE+EE
Sbjct: 181 MRRKKLGPSPLSRMVMAEEEE 201


>ref|XP_003608075.1| hypothetical protein MTR_4g087380 [Medicago truncatula]
           gi|355509130|gb|AES90272.1| hypothetical protein
           MTR_4g087380 [Medicago truncatula]
          Length = 238

 Score =  210 bits (534), Expect = 2e-52
 Identities = 117/198 (59%), Positives = 145/198 (73%), Gaps = 26/198 (13%)
 Frame = +2

Query: 65  YSQFFLFMQDPKK-SHRRKSWYQRAMEI------------------ATLWKSILKPIELP 187
           Y QF LFMQDPK  S+ RK WYQRAM++                  +TLWK+I K  ++P
Sbjct: 37  YFQFSLFMQDPKNDSNTRKPWYQRAMDVTSLWRIIPKSTNISTSNNSTLWKAIPKSPQVP 96

Query: 188 TRSS---KPRLKKSTSLSVATSFTRVCLCAPISSYNEVFQADVPPRRSNSYPRT-KSLMV 355
           T+SS   K +L+K TSL VATSFTRVCLCAPI SYNE+ + +VPPRRSNSYPR+ K L  
Sbjct: 97  TQSSNNNKTKLRKCTSLKVATSFTRVCLCAPIYSYNEILRNEVPPRRSNSYPRSSKPLQT 156

Query: 356 PSK--RFTNVRINTENNK-VFRGKSLNDDVLMRRFVVEEKAMMHFRRRNQIEVIRKRSTM 526
            S   R  + R++TE ++ +FRGKSL DDVLM+RFV+EE+AMM  RRRNQ+EVIRKRS M
Sbjct: 157 TSHEIRTHSARLSTEGSRRIFRGKSLTDDVLMKRFVIEEEAMMQIRRRNQMEVIRKRSVM 216

Query: 527 RRKKLGPSPLSRVVMAED 580
           RRK+LGPSPLSR+V+A+D
Sbjct: 217 RRKRLGPSPLSRMVLADD 234


>emb|CAN69676.1| hypothetical protein VITISV_027733 [Vitis vinifera]
          Length = 268

 Score =  210 bits (534), Expect = 2e-52
 Identities = 112/191 (58%), Positives = 135/191 (70%), Gaps = 34/191 (17%)
 Frame = +2

Query: 116 KSWYQRAMEIATLWKSILKPIELPTRSS--------------------------KPRLKK 217
           K WYQRAME+ATLWK+I K  E+PT ++                          + +L+K
Sbjct: 78  KPWYQRAMEMATLWKTISKSTEIPTANTTLWKTISKSAAIRTTTTTTTTTTNPHRQKLRK 137

Query: 218 STSLSVATSFTRVCLCAPISSYNEVFQADVPPRRSNSYPRTKSLMVPSKRFTNVRINTEN 397
            TSL VATSFTRVCLCAPISSY EVF+A++PPRRSNSYPR+K    P +R +N RI+ E 
Sbjct: 138 CTSLRVATSFTRVCLCAPISSYTEVFRAELPPRRSNSYPRSKPFPSPQERISNARISMEG 197

Query: 398 N--------KVFRGKSLNDDVLMRRFVVEEKAMMHFRRRNQIEVIRKRSTMRRKKLGPSP 553
           +        +VFRGKSL DDVLMRRFVVEE+AM+  RRRNQ+EVIR+RS MRRKKLGPSP
Sbjct: 198 SARVSAEGRRVFRGKSLTDDVLMRRFVVEEEAMIQVRRRNQMEVIRRRSAMRRKKLGPSP 257

Query: 554 LSRVVMAEDEE 586
           LSR+VMAE+EE
Sbjct: 258 LSRMVMAEEEE 268


>ref|XP_003520180.1| PREDICTED: uncharacterized protein LOC100813395 [Glycine max]
          Length = 213

 Score =  208 bits (530), Expect = 7e-52
 Identities = 107/180 (59%), Positives = 129/180 (71%), Gaps = 24/180 (13%)
 Frame = +2

Query: 113 RKSWYQRAMEIATLWKSILKPIELPTRSS------------------------KPRLKKS 220
           RK WYQRA+E+ +LWKS+ K  E+PT +S                        K +L+K 
Sbjct: 30  RKPWYQRAIEVTSLWKSVSKSTEIPTPNSSTLWKRSSSMPKSPQVPTTPSPNNKNKLRKC 89

Query: 221 TSLSVATSFTRVCLCAPISSYNEVFQADVPPRRSNSYPRTKSLMVPSKRFTNVRINTENN 400
            SL VA+SFTRVCLCAPI SYNE+ +A+VPPRRSNSYPR+K L    +R  + R++TE  
Sbjct: 90  ASLKVASSFTRVCLCAPIYSYNEILRAEVPPRRSNSYPRSKPLHASHERTPSARLSTEGR 149

Query: 401 KVFRGKSLNDDVLMRRFVVEEKAMMHFRRRNQIEVIRKRSTMRRKKLGPSPLSRVVMAED 580
           +VFRGKSL DDVLMRRFV+EE+AMM  RRRNQ+EVIRKRS MRRKKLGPSPLSR+VMA D
Sbjct: 150 RVFRGKSLTDDVLMRRFVIEEEAMMQIRRRNQMEVIRKRSMMRRKKLGPSPLSRMVMAND 209


>ref|XP_003608076.1| hypothetical protein MTR_4g087380 [Medicago truncatula]
           gi|355509131|gb|AES90273.1| hypothetical protein
           MTR_4g087380 [Medicago truncatula]
          Length = 240

 Score =  207 bits (527), Expect = 2e-51
 Identities = 116/200 (58%), Positives = 143/200 (71%), Gaps = 28/200 (14%)
 Frame = +2

Query: 65  YSQFFLFMQDPKKSHR---RKSWYQRAMEI------------------ATLWKSILKPIE 181
           Y QF LFMQDPK       RK WYQRAM++                  +TLWK+I K  +
Sbjct: 37  YFQFSLFMQDPKNDSNTRCRKPWYQRAMDVTSLWRIIPKSTNISTSNNSTLWKAIPKSPQ 96

Query: 182 LPTRSS---KPRLKKSTSLSVATSFTRVCLCAPISSYNEVFQADVPPRRSNSYPRT-KSL 349
           +PT+SS   K +L+K TSL VATSFTRVCLCAPI SYNE+ + +VPPRRSNSYPR+ K L
Sbjct: 97  VPTQSSNNNKTKLRKCTSLKVATSFTRVCLCAPIYSYNEILRNEVPPRRSNSYPRSSKPL 156

Query: 350 MVPSK--RFTNVRINTENNK-VFRGKSLNDDVLMRRFVVEEKAMMHFRRRNQIEVIRKRS 520
              S   R  + R++TE ++ +FRGKSL DDVLM+RFV+EE+AMM  RRRNQ+EVIRKRS
Sbjct: 157 QTTSHEIRTHSARLSTEGSRRIFRGKSLTDDVLMKRFVIEEEAMMQIRRRNQMEVIRKRS 216

Query: 521 TMRRKKLGPSPLSRVVMAED 580
            MRRK+LGPSPLSR+V+A+D
Sbjct: 217 VMRRKRLGPSPLSRMVLADD 236


Top