BLASTX nr result

ID: Coptis24_contig00007573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007573
         (2308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276508.1| PREDICTED: uncharacterized protein LOC100264...   357   6e-96
ref|XP_003590679.1| hypothetical protein MTR_1g072560 [Medicago ...   332   4e-88
ref|XP_002533072.1| conserved hypothetical protein [Ricinus comm...   323   1e-85
ref|NP_171828.1| uncharacterized protein [Arabidopsis thaliana] ...   304   8e-80
ref|XP_002889451.1| hypothetical protein ARALYDRAFT_470307 [Arab...   301   4e-79

>ref|XP_002276508.1| PREDICTED: uncharacterized protein LOC100264786 [Vitis vinifera]
            gi|296086718|emb|CBI32353.3| unnamed protein product
            [Vitis vinifera]
          Length = 667

 Score =  357 bits (917), Expect = 6e-96
 Identities = 268/669 (40%), Positives = 355/669 (53%), Gaps = 52/669 (7%)
 Frame = +1

Query: 55   MSSTSVFKALQELFPQVDSRILKAVSIEHNKDTAAAVEFILCEVLPSIGNPTKAQGSHIV 234
            M   +V++ALQ++FPQVD+R+LKAV+IEH+KD  AAVEF+L +VLP +     + GS   
Sbjct: 1    MGFKAVYRALQDVFPQVDARLLKAVAIEHSKDADAAVEFVLHDVLPFMSQHPGSSGSCY- 59

Query: 235  TSGEQSQLLENQEA-VLEGKSLS----QSRFVASKHCDDSNLTSKVTDDSLTCLVEETPN 399
                ++QLLE+  + ++EG+  S        V      + +L++K        + +E PN
Sbjct: 60   ----ENQLLEDSSSGMVEGEEESIPTDHQHVVEEAKAANVDLSTKSGS-----VADENPN 110

Query: 400  HIDAQLESVS-DLVEETLNHIDVQEESVAEANLSTFVG----SKLGNGPRCSKVSWPSSD 564
              +A   S + D  +    H +V E + +E  +    G    SK+G G R S V   +  
Sbjct: 111  DDEAMDGSTALDFYDANDGHDEVYENTESEELIPLEQGQDISSKVGPG-RISNVIAITPL 169

Query: 565  HFT------------WKLKELAS---------------LAYLNP----HEGYNPFQECVD 651
            H              +K K+L                 L  + P    HE  +      D
Sbjct: 170  HADDGCGDLELALEKYKTKDLTLSQDFGDSGVTSIIDFLFQITPKTLIHEDDSKVDGLND 229

Query: 652  GH--KKNVSLGEDQVLQAASTS--MVHDDNVFSETNDVSQATILDLNEPVAYNSTFCGGS 819
             H   K++ L +  V  ++ TS   +H D + S  ND   A     N PVA     C   
Sbjct: 230  PHADSKDLDLQDTSVNASSVTSNASMHGDGIISSLND-QHADSDSFNGPVA-----CDFD 283

Query: 820  DSFHAKSCSNAKSNGIE----NAPPTFQLDSSCVFEESQKLVEDXXXXXXXXXXXXKELD 987
               H K    +  +GI+      P T         +  ++L++             KE  
Sbjct: 284  TVTHKKGQEASGLDGIQVEMIQVPDT---------DAPERLLQAEIDSISCITHCEKEES 334

Query: 988  ARGSLETVSDQMVYDTKLADFEDESFSTTVGTQSGQICKIDLLEDAISEAKHNKKTLFSS 1167
            +         +  +D ++     E    T+ TQSG IC  D LE+ I +AK+NKKTLFSS
Sbjct: 335  SVSFDHDAKQEDAFDIEMVGDVVEPVLNTIVTQSGHICSTDFLEEMIEDAKNNKKTLFSS 394

Query: 1168 MESVINMMREVEHLXXXXXXXXXXXXXXXXDILSKVEDIKRMLLHAKEANDMHAGEVYGE 1347
            M+SV+N+MREVE                  +IL++VE++K ML HAKEAN MHAGEVYGE
Sbjct: 395  MDSVMNIMREVELQEKAAQQAREEAARGGLEILTRVEELKEMLQHAKEANGMHAGEVYGE 454

Query: 1348 KAILATEARELQSRLLNLSDERDRSLTILDEMRQVLEARLLAAKEIRKEAEQNKHEKEDS 1527
            KAILATEARELQSRLL+LSDERD+SL ILDEMR  LEARL AA+E  K AEQ K EKE+S
Sbjct: 455  KAILATEARELQSRLLSLSDERDKSLKILDEMRHALEARLAAAEEDIKAAEQVKFEKEES 514

Query: 1528 ARKALMDQELIMEKVVKESKRLQSEAEENSKLREFLMDRGQIVDILQGEIAVICQDVKML 1707
            ARKAL +QE IMEKVV+ES  L+ EAEENSKL+EFLMDRG IVD+LQGEI+VICQDVK L
Sbjct: 515  ARKALAEQEAIMEKVVQESMMLKQEAEENSKLQEFLMDRGHIVDMLQGEISVICQDVKFL 574

Query: 1708 KENFDDQVPFSKSLSSSQTSCIXXXXXXXXXXXXXNLVP-EQLESSENGPK--TPSVPVD 1878
            K  FDD+VP S+SLSSSQTSC              + VP   L      PK  +P+  V 
Sbjct: 575  KVKFDDRVPLSQSLSSSQTSCKLASSSSSLKSMSSDPVPVPALADESETPKQASPTASVG 634

Query: 1879 DVSPNSASE 1905
              SP  + E
Sbjct: 635  GQSPKKSPE 643


>ref|XP_003590679.1| hypothetical protein MTR_1g072560 [Medicago truncatula]
            gi|355479727|gb|AES60930.1| hypothetical protein
            MTR_1g072560 [Medicago truncatula]
          Length = 673

 Score =  332 bits (850), Expect = 4e-88
 Identities = 244/659 (37%), Positives = 341/659 (51%), Gaps = 52/659 (7%)
 Frame = +1

Query: 55   MSSTSVFKALQELFPQVDSRILKAVSIEHNKDTAAAVEFILCEVLPSIG------NPTKA 216
            M   SV+++L ++FPQVDSR+L+AV+IEH+KD   A E +L E++P+I       +P++ 
Sbjct: 1    MGFNSVYRSLLDIFPQVDSRLLRAVAIEHSKDADMAAEVVLMEIIPAISKKLLPASPSRD 60

Query: 217  QGSHIVTSGEQSQLLENQEAVLEGKSL---------SQSRFV--------ASKHCDDSNL 345
                ++ + E     E++  +L    L         S S +V        +S    D N+
Sbjct: 61   TNPRVIVNLEDESESEDEGEILARHKLVKSMDVGSSSSSHYVHQEIVKSASSSSGPDLNV 120

Query: 346  T---------------SKVTDDSLTCLVEETPNHIDAQLESVSDLVEETLNHIDVQEESV 480
            T                  ++D    LV+  P   D  + S S L       + + + + 
Sbjct: 121  TVTSPQVKSPVAFINLEDESEDEGKRLVQYQPVE-DTDVGSSSSLASSYSRPVQIIKAAD 179

Query: 481  AEANLSTFVGSKLGNGPRCSKVSWPSSDHF------------TWKLKELASLAYLNPHEG 624
            +   L   V          S+++  +S  F            + ++ +  S  + +    
Sbjct: 180  SSCGLDLNVALNDSTLSNASELNDETSQFFGVNNDGNLTRDISSEIAQETSNGFWHETSE 239

Query: 625  YNPFQECVDGHKKNV-SLGEDQVLQAASTSMVHDDNVFSETNDVSQATILDLNEPVAYNS 801
            Y      VD   +N+ S G   VL+    ++  +    S TN+    T+ +LNE      
Sbjct: 240  YFDQGRLVDVIVENLASSGVYHVLETEQINVTEE--AASMTNN-GNGTVNNLNEEWV--- 293

Query: 802  TFCGGSDSFHAKSCSNAKSNGIENAPPTF-QLDSSCVFEESQKLVEDXXXXXXXXXXXXK 978
             F   ++ + A  C+   S+G+E +     +L  S V   SQ                  
Sbjct: 294  DFVPTAEDYDATICNT--SHGLEKSETILIELGDSEVQTVSQ-----------VQGLPLN 340

Query: 979  ELDARGSLETVSDQMVYDTKLADFEDESFSTTVGTQSGQICKIDLLEDAISEAKHNKKTL 1158
              D +  L T    +V +   A   DE    T  ++    C ID+LE+ I EAK NKKTL
Sbjct: 341  AQDLQTELNTNHSTIVGENSHA--VDEIDENTTLSKYNPACSIDMLEETIDEAKTNKKTL 398

Query: 1159 FSSMESVINMMREVEHLXXXXXXXXXXXXXXXXDILSKVEDIKRMLLHAKEANDMHAGEV 1338
            FSSMES+IN+MREVEH                 DIL +VE+ + ML+HAKEANDMHAGE+
Sbjct: 399  FSSMESLINLMREVEHQEKLAEQANIAATTGGFDILDRVEEYQAMLVHAKEANDMHAGEI 458

Query: 1339 YGEKAILATEARELQSRLLNLSDERDRSLTILDEMRQVLEARLLAAKEIRKEAEQNKHEK 1518
            YGEKAILATE +ELQSRL +LS ERD SL ILDEMRQ LE+RL AA  +RK AE  K EK
Sbjct: 459  YGEKAILATELKELQSRLSSLSGERDESLAILDEMRQSLESRLAAADMLRKAAELEKLEK 518

Query: 1519 EDSARKALMDQELIMEKVVKESKRLQSEAEENSKLREFLMDRGQIVDILQGEIAVICQDV 1698
            E+SAR AL++QE +MEKVV+ES+RLQ EAEENSKLREFLMDRGQ+VD LQGEI+VICQD+
Sbjct: 519  EESARAALLEQEAMMEKVVQESRRLQQEAEENSKLREFLMDRGQVVDTLQGEISVICQDI 578

Query: 1699 KMLKENFDDQVPFSKSLSSSQTSCIXXXXXXXXXXXXXNLVPEQLESSENGPKTPSVPV 1875
            ++LKE FD  +P SKS ++SQTSCI             N+  E  +SSE    T + P+
Sbjct: 579  RLLKEKFDANLPLSKSFTASQTSCILASSGSSHKTVASNVGSEHSDSSEVLKITQAAPI 637


>ref|XP_002533072.1| conserved hypothetical protein [Ricinus communis]
            gi|223527136|gb|EEF29311.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 600

 Score =  323 bits (829), Expect = 1e-85
 Identities = 235/628 (37%), Positives = 328/628 (52%), Gaps = 14/628 (2%)
 Frame = +1

Query: 55   MSSTSVFKALQELFPQVDSRILKAVSIEHNKDTAAAVEFILCEVLPSIGNPTKAQGSHIV 234
            M   +V+++L ELFPQVDSRILKAV+IEH KD   A + ++ EVLP +   T      + 
Sbjct: 1    MGFKTVYRSLGELFPQVDSRILKAVAIEHPKDADVAADVVISEVLPFLA--TIVDSPPVN 58

Query: 235  TSGEQSQLLENQEAVLEGKSLSQS-----RFVASKHCDDSNLTSKVTDDSLTCLVE--ET 393
            +  + S L   +   LE  S+ ++        +S H   S    K  + +    V+    
Sbjct: 59   SDRKPSGLSAGRGDSLESNSIDKACTCKTDLGSSGHPSGSTHQEKSENSTAPVSVDLNAD 118

Query: 394  PNHIDAQLESVSDLVEETLNHIDVQEESVAEANLSTFVGSKLGNGPRCSKVSWPSSDHFT 573
             N ++  +ES   ++     H D  +   ++   S  V S L     C +++       T
Sbjct: 119  TNQLEGCIESEELILLVRPQHQDNVQSVTSQT--SELVSSALP----CEEITDSIQVCGT 172

Query: 574  WKLKELASLAYLNPHEGYNPFQECVDGHKKNVSLGEDQVLQAASTSMVHDDNVFSETNDV 753
             + K  ASL             +C D    N+++G  Q  Q  STS+  ++  F  T D 
Sbjct: 173  METKVPASLG------------KCQDD---NITVGGKQYFQVISTSLTQENGDF--TGDQ 215

Query: 754  SQATILDLNEPVAYNSTFCGGSDSFHAKSCSNAKSNGIENAPPTFQLDSSCVFEESQKLV 933
             +                  GSD                  P     D+S    +    V
Sbjct: 216  GEWK----------------GSDG-----------------PLPDDFDTSGKISQVVSCV 242

Query: 934  EDXXXXXXXXXXXXKELDARGSLETVSDQMVYDTKLADFEDESFSTTVGT----QSGQIC 1101
            +              +L+   SL     +   +    DF+ E   T   +    +  Q  
Sbjct: 243  DGGKSPRVEPCVDGTDLEVDNSLV----ERTPNAAEVDFQSELSGTPTNSCKNLKFNQDI 298

Query: 1102 KIDLLEDAISEAKHNKKTLFSSMESVINMMREVEHLXXXXXXXXXXXXXXXXDILSKVED 1281
            KID LED +  A+HNK+TLF SMES++NMMR+VE                  DIL+K  +
Sbjct: 299  KIDFLEDIVEAARHNKRTLFLSMESIMNMMRKVELQEKAAEDAKEEASSAGLDILTKANE 358

Query: 1282 IKRMLLHAKEANDMHAGEVYGEKAILATEARELQSRLLNLSDERDRSLTILDEMRQVLEA 1461
            +K+ML HAK+ANDMHAGEVYGE+AILATE RELQ+RLL+LSDERD++L I+DEM Q LE 
Sbjct: 359  LKQMLEHAKDANDMHAGEVYGERAILATEVRELQARLLSLSDERDKALAIIDEMHQSLEE 418

Query: 1462 RLLAAKEIRKEAEQNKHEKEDSARKALMDQELIMEKVVKESKRLQSEAEENSKLREFLMD 1641
            RL AA+E++K AE+ K E+E++AR AL +QE IM +VV+ESK +Q EA+ENSKLREFLMD
Sbjct: 419  RLAAAEELKKAAEKQKLEQEEAARNALAEQEAIMGQVVQESKIIQQEADENSKLREFLMD 478

Query: 1642 RGQIVDILQGEIAVICQDVKMLKENFDDQVPFSKSLSSSQTSCIXXXXXXXXXXXXXNLV 1821
            RG++VD LQGEI+VICQDV++LKE FD+++P SKS+SSSQTSCI             +LV
Sbjct: 479  RGRVVDTLQGEISVICQDVRLLKERFDERIPLSKSISSSQTSCILASSGSSIRSIATDLV 538

Query: 1822 PEQLESS---ENGPKTPSVPVDDVSPNS 1896
            PE  E+S   ++   TPS  +D  SP S
Sbjct: 539  PEPRETSKSLKDRSLTPS-SIDGRSPTS 565


>ref|NP_171828.1| uncharacterized protein [Arabidopsis thaliana]
            gi|334182264|ref|NP_001184898.1| uncharacterized protein
            [Arabidopsis thaliana] gi|3850585|gb|AAC72125.1| ESTs
            gb|H36966, gb|R65511, gb|T42324 and gb|T20569 come from
            this gene [Arabidopsis thaliana]
            gi|332189433|gb|AEE27554.1| uncharacterized protein
            [Arabidopsis thaliana] gi|332189434|gb|AEE27555.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 571

 Score =  304 bits (778), Expect = 8e-80
 Identities = 227/583 (38%), Positives = 307/583 (52%), Gaps = 12/583 (2%)
 Frame = +1

Query: 55   MSSTSVFKALQELFPQVDSRILKAVSIEHNKDTAAAVEFILCEVLPSIGNPT--KAQGSH 228
            M   SV+++L E+FPQ+D+RIL+AV+IEH KD   A   +L E++PS  +        S 
Sbjct: 1    MGFGSVYRSLTEIFPQIDARILRAVAIEHPKDADEAAAVVLSEIIPSFSSNLFHNFTQSS 60

Query: 229  IVTSGEQSQLLENQEAVLEGKSLSQSRFVASKHCDDSNLTSKVTDDSLTCLVEETPNHID 408
              +SG  S+     E  LE  +     F+ +     S  +S  + ++L  +V    N   
Sbjct: 61   YKSSGSISE--REVEHGLEDVASRCRPFLGASGSKASTSSSSSSSETLPLVVTRDHNTRA 118

Query: 409  AQLESVSDLVEETLNHIDVQEESVAEANLSTFVGSKLGNGPRCSKVSWPSSDHFTWKLKE 588
               + VS++ E T    +V                             P   H   + +E
Sbjct: 119  LSTDLVSNMNELTTLQPNVD----------------------------PDVCHKDLESEE 150

Query: 589  LASLAYLNPHEG--YNPFQECVD---GHKKNVSLGEDQVLQAASTSMVHDDNVFSETNDV 753
            + S+      E   Y+ F  C D     K  + + ED +  A+  S+   DNV   +N  
Sbjct: 151  IQSVKKARGKENGNYDLFGRCFDVTSNAKIGLDVPEDDI--ASVVSLFSLDNVKLASNFW 208

Query: 754  SQATILDLNEPVAYNSTFCGGSDSFHAKSCSNAKSNGIENAPP---TFQLDSSC--VFEE 918
                  DL   + +N                NA S  +++ P    T     SC  V   
Sbjct: 209  E-----DLGFDITWNQA-------------ENAVSKLVDSTPGDTMTTTQQGSCFEVGHG 250

Query: 919  SQKLVEDXXXXXXXXXXXXKELDARGSLETVSDQMVYDTKLADFEDESFSTTVGTQSGQI 1098
            S  LV++                +  SL + +     DT++ D    +FST     S  +
Sbjct: 251  STNLVDET---------------SNRSLFSENG----DTEIGD----AFST-----STHV 282

Query: 1099 CKIDLLEDAISEAKHNKKTLFSSMESVINMMREVEHLXXXXXXXXXXXXXXXXDILSKVE 1278
            C +D LED I +AK NKK L + ME+V N+MREVE                  D L KVE
Sbjct: 283  CSVDQLEDIIEDAKSNKKNLLTEMETVTNIMREVELKEKDAEKSKEEAARGGLDTLQKVE 342

Query: 1279 DIKRMLLHAKEANDMHAGEVYGEKAILATEARELQSRLLNLSDERDRSLTILDEMRQVLE 1458
            ++K+ML HAKEANDMHAGEVYGEK+ILATE +EL++RLLNLS+ER++SL ILDEMR  LE
Sbjct: 343  ELKKMLEHAKEANDMHAGEVYGEKSILATEVKELENRLLNLSEERNKSLAILDEMRGSLE 402

Query: 1459 ARLLAAKEIRKEAEQNKHEKEDSARKALMDQELIMEKVVKESKRLQSEAEENSKLREFLM 1638
             RL AA E++K AE+ K +KEDSA KAL +QE  MEKVV+ESK LQ EAEENSKLR+FLM
Sbjct: 403  IRLAAALELKKTAEKEKKDKEDSALKALAEQEANMEKVVQESKLLQQEAEENSKLRDFLM 462

Query: 1639 DRGQIVDILQGEIAVICQDVKMLKENFDDQVPFSKSLSSSQTS 1767
            DRGQIVD LQGEI+VICQDVK+LKE F+++VP +KS+SSS TS
Sbjct: 463  DRGQIVDTLQGEISVICQDVKLLKEKFENRVPLTKSISSSFTS 505


>ref|XP_002889451.1| hypothetical protein ARALYDRAFT_470307 [Arabidopsis lyrata subsp.
            lyrata] gi|297335293|gb|EFH65710.1| hypothetical protein
            ARALYDRAFT_470307 [Arabidopsis lyrata subsp. lyrata]
          Length = 573

 Score =  301 bits (772), Expect = 4e-79
 Identities = 228/583 (39%), Positives = 311/583 (53%), Gaps = 12/583 (2%)
 Frame = +1

Query: 55   MSSTSVFKALQELFPQVDSRILKAVSIEHNKDTAAAVEFILCEVLPSIGNPTKAQGSHIV 234
            M   SV+++L E+FPQ+D+RIL+AV+IEH KD   A   +L E++PS  +      SH +
Sbjct: 1    MGFGSVYRSLTEIFPQIDARILRAVAIEHPKDADEAAAVVLSEIIPSFSSNL----SHNL 56

Query: 235  T--SGEQSQLLENQEAVLEGKSLSQSRF-----VASKHCDDSNLTSKVTDDSLTCLVEET 393
            T  S + S  + ++E V  G     SR       +      S+  S  + ++L  +V   
Sbjct: 57   TQSSNKSSGSISDRE-VERGLEDVVSRCRPFLGASGSKPSTSSSCSSSSSETLPLVVVRD 115

Query: 394  PNHIDAQLESVSDLVEETLNHIDVQEESVAEANLSTFVGSKLGNGPRCSKVSWPSSDHFT 573
             N      + VS++ E T              NL   VG  +     C         H  
Sbjct: 116  HNTRALSTDLVSNMNEPT--------------NLQPNVGLDV-----C---------HKD 147

Query: 574  WKLKELASL--AYLNPHEGYNPFQECVDGHKKNVSLGEDQVLQAASTSMVHDDNVFSETN 747
             + +E+ SL  A    H  Y+ F  C D  K N  LG           +V +D++ S  +
Sbjct: 148  LESEEVQSLKKARGKEHGNYDFFGRCFDV-KSNAKLG----------LLVPEDDIASVVS 196

Query: 748  DVSQATIL---DLNEPVAYNSTFCGGSDSFHAKSCSNAKSNGIENAPPTFQLDSSCVFEE 918
             +S   I    D  E + +  T+             NA S  +++ P     D++   ++
Sbjct: 197  AISLDNIKLTSDFWEDLCFGMTW---------NQAENAVSKLVDSTPG----DTTTTTQQ 243

Query: 919  SQKLVEDXXXXXXXXXXXXKELDARGSLETVSDQMVYDTKLADFEDESFSTTVGTQSGQI 1098
                  D              +D   +   VS+    DT++ D    +FST     S  +
Sbjct: 244  GSCFEVDSGSTNL--------VDETSNRSLVSENG--DTEIGD----TFST-----STHV 284

Query: 1099 CKIDLLEDAISEAKHNKKTLFSSMESVINMMREVEHLXXXXXXXXXXXXXXXXDILSKVE 1278
            C +D LE+ I +AK NKKTL + ME+V N+MREVE                  D L KVE
Sbjct: 285  CSVDHLEEIIEDAKSNKKTLLTEMETVTNLMREVELQEKDAEKSKEEAARGGLDTLQKVE 344

Query: 1279 DIKRMLLHAKEANDMHAGEVYGEKAILATEARELQSRLLNLSDERDRSLTILDEMRQVLE 1458
            ++K+ML HAKEANDMHAGEVYGEK+ILATE +EL++RLLNLS+ER++SLTILDEMR  LE
Sbjct: 345  ELKKMLEHAKEANDMHAGEVYGEKSILATEVKELENRLLNLSEERNKSLTILDEMRGSLE 404

Query: 1459 ARLLAAKEIRKEAEQNKHEKEDSARKALMDQELIMEKVVKESKRLQSEAEENSKLREFLM 1638
             RL  A E++K AEQ K  KEDSA +AL++QE  MEKVV+ESK LQ EAEENSKLREFLM
Sbjct: 405  IRLATALEMKKTAEQEKKNKEDSALQALVEQEANMEKVVQESKLLQQEAEENSKLREFLM 464

Query: 1639 DRGQIVDILQGEIAVICQDVKMLKENFDDQVPFSKSLSSSQTS 1767
            DRGQIVD LQGEI+VICQDVK+LKE F+++V  +  +SSS TS
Sbjct: 465  DRGQIVDSLQGEISVICQDVKLLKEKFENRVQLTNLISSSLTS 507


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