BLASTX nr result
ID: Coptis24_contig00007556
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007556 (1331 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI29866.3| unnamed protein product [Vitis vinifera] 242 1e-61 emb|CBI24892.3| unnamed protein product [Vitis vinifera] 230 7e-58 ref|XP_002278849.1| PREDICTED: nuclear transcription factor Y su... 230 7e-58 ref|XP_004143236.1| PREDICTED: nuclear transcription factor Y su... 218 2e-54 ref|XP_002282778.2| PREDICTED: nuclear transcription factor Y su... 218 4e-54 >emb|CBI29866.3| unnamed protein product [Vitis vinifera] Length = 354 Score = 242 bits (618), Expect = 1e-61 Identities = 146/336 (43%), Positives = 194/336 (57%), Gaps = 17/336 (5%) Frame = +1 Query: 37 QPWWQSVGYNSEHSVEMGDS------VLKPDGSMETQRSKSQSDGVRDEGDIISKEAQTT 198 QPWW+ +G + +G+S P+G + T KS++ V D G+ KE + T Sbjct: 26 QPWWRGLGNDVISPDVLGESSPNSASAEHPNGGVGTIAIKSRAKVVTDNGNDPEKEMKIT 85 Query: 199 SVPESGSDGSYGPVYQHLQYVASTTPTTGGAY-LVPHTEPELVGHSIACAPYPYSDPYYG 375 S SDGS G +H Q S P T Y L P ++ ELVGHSIACA YPYS+PYY Sbjct: 86 LA--SQSDGSCGQEQKHPQQAVSMMPMTMAEYHLAPPSQLELVGHSIACASYPYSEPYYT 143 Query: 376 GLMNAYGPQAL------SMHHSRMPLPLDITEEPVYVNPKQYNGIMRRRQSRAKAELEKK 537 G++ AYGPQ L ++ +RM LP+++ EEPVYVN KQY+GI+RRRQSRAKAELEKK Sbjct: 144 GVIPAYGPQGLVQSQFLGVNVARMALPIEMAEEPVYVNAKQYHGILRRRQSRAKAELEKK 203 Query: 538 LIKVRKPYLHESRHQHAIKRQRGCGGRFLNTKKVNHEPKL-TPEEGVRYSKXXXXXXXXX 714 LIKVRKPYLHESRHQHA++R RGCGGRFLNTKK++ P++G Sbjct: 204 LIKVRKPYLHESRHQHAMRRARGCGGRFLNTKKLDSNASYDMPDKG-----SDPDVNLST 258 Query: 715 XXXXXXXXXXVQCDASHGKEDVDEQLMKRDMTEPRTYSKE---DGIGNSCYKQQQDFRLS 885 + ++S ++ L R + ++++ G GNSCY Q F+LS Sbjct: 259 RPISSSVSESLPSNSSRNEDSPTSHLDARGPSVQELHNRQIASHGNGNSCYPHNQGFQLS 318 Query: 886 AFQAPAGERGEEGDCSGQLRGSISVRPASHRALTIQ 993 + + +R EEGD +G+ I V A HRALTI+ Sbjct: 319 TYHSLKDDRVEEGDHAGRQHERILVNRAPHRALTIK 354 >emb|CBI24892.3| unnamed protein product [Vitis vinifera] Length = 405 Score = 230 bits (586), Expect = 7e-58 Identities = 144/343 (41%), Positives = 193/343 (56%), Gaps = 18/343 (5%) Frame = +1 Query: 19 RSSPSC----QPWWQSVGYNSEHSVEMGDSVLKP------DGSMETQRSKSQSDGVRDEG 168 +S+PS QPWW VG N+ +G S K + + + + Q++G D+G Sbjct: 76 KSNPSSTVYSQPWWHGVGNNAISPAALGGSPSKSTSVEHLNSHITSNGFQLQANGRLDDG 135 Query: 169 DIISKEAQTTSVPESGSDGSYGPVYQHLQYVASTTPTTGGAYLVPHTEPELVGHSIACAP 348 +K Q T +S DG G +QHL AS+T +L P+++ ELVGHSI Sbjct: 136 TTFNKGTQPTVALQS--DGRNGQEHQHLNPTASSTLPIMSEHLEPNSQMELVGHSIVLTS 193 Query: 349 YPYSDPYYGGLMNAYGPQAL------SMHHSRMPLPLDITEEPVYVNPKQYNGIMRRRQS 510 YPY DP+ G+M +YGPQA+ MH RMPLPL++ EEPVYVN KQY+GI+RRRQS Sbjct: 194 YPYQDPHNVGIMTSYGPQAMVHPHLFGMHQPRMPLPLEMEEEPVYVNAKQYHGILRRRQS 253 Query: 511 RAKAELEKKLIKVRKPYLHESRHQHAIKRQRGCGGRFLNTKKV-NHEPKLTPEEG-VRYS 684 RAKAELEKK IKVRKPYLHESRHQHA++R RGCGGRFLNTKK+ N++ T E+G V + Sbjct: 254 RAKAELEKKAIKVRKPYLHESRHQHAMRRARGCGGRFLNTKKLDNNDANTTAEKGSVSGA 313 Query: 685 KXXXXXXXXXXXXXXXXXXXVQCDASHGKEDVDEQLMKRDMTEPRTYSKEDGIGNSCYKQ 864 D+S +++ + + +DM E TYS + G+ Sbjct: 314 ALSTQSASSSGSEHLPTNSSRNLDSSSVQQEEKGRTI-QDMLEAHTYSNGNRNGHGL--- 369 Query: 865 QQDFRLSAFQAPAGERGEEGDCSGQLRGSISVRPASHRALTIQ 993 SA+ + G G GDC GQ R ++ + A HRAL I+ Sbjct: 370 -----SSAYHSSNGSEG--GDCFGQPRENMQLNTAPHRALPIK 405 >ref|XP_002278849.1| PREDICTED: nuclear transcription factor Y subunit A-1-like [Vitis vinifera] Length = 346 Score = 230 bits (586), Expect = 7e-58 Identities = 144/343 (41%), Positives = 193/343 (56%), Gaps = 18/343 (5%) Frame = +1 Query: 19 RSSPSC----QPWWQSVGYNSEHSVEMGDSVLKP------DGSMETQRSKSQSDGVRDEG 168 +S+PS QPWW VG N+ +G S K + + + + Q++G D+G Sbjct: 17 KSNPSSTVYSQPWWHGVGNNAISPAALGGSPSKSTSVEHLNSHITSNGFQLQANGRLDDG 76 Query: 169 DIISKEAQTTSVPESGSDGSYGPVYQHLQYVASTTPTTGGAYLVPHTEPELVGHSIACAP 348 +K Q T +S DG G +QHL AS+T +L P+++ ELVGHSI Sbjct: 77 TTFNKGTQPTVALQS--DGRNGQEHQHLNPTASSTLPIMSEHLEPNSQMELVGHSIVLTS 134 Query: 349 YPYSDPYYGGLMNAYGPQAL------SMHHSRMPLPLDITEEPVYVNPKQYNGIMRRRQS 510 YPY DP+ G+M +YGPQA+ MH RMPLPL++ EEPVYVN KQY+GI+RRRQS Sbjct: 135 YPYQDPHNVGIMTSYGPQAMVHPHLFGMHQPRMPLPLEMEEEPVYVNAKQYHGILRRRQS 194 Query: 511 RAKAELEKKLIKVRKPYLHESRHQHAIKRQRGCGGRFLNTKKV-NHEPKLTPEEG-VRYS 684 RAKAELEKK IKVRKPYLHESRHQHA++R RGCGGRFLNTKK+ N++ T E+G V + Sbjct: 195 RAKAELEKKAIKVRKPYLHESRHQHAMRRARGCGGRFLNTKKLDNNDANTTAEKGSVSGA 254 Query: 685 KXXXXXXXXXXXXXXXXXXXVQCDASHGKEDVDEQLMKRDMTEPRTYSKEDGIGNSCYKQ 864 D+S +++ + + +DM E TYS + G+ Sbjct: 255 ALSTQSASSSGSEHLPTNSSRNLDSSSVQQEEKGRTI-QDMLEAHTYSNGNRNGHGL--- 310 Query: 865 QQDFRLSAFQAPAGERGEEGDCSGQLRGSISVRPASHRALTIQ 993 SA+ + G G GDC GQ R ++ + A HRAL I+ Sbjct: 311 -----SSAYHSSNGSEG--GDCFGQPRENMQLNTAPHRALPIK 346 >ref|XP_004143236.1| PREDICTED: nuclear transcription factor Y subunit A-1-like [Cucumis sativus] gi|449482511|ref|XP_004156306.1| PREDICTED: nuclear transcription factor Y subunit A-1-like [Cucumis sativus] Length = 341 Score = 218 bits (556), Expect = 2e-54 Identities = 128/331 (38%), Positives = 181/331 (54%), Gaps = 6/331 (1%) Frame = +1 Query: 19 RSSPSCQPWWQSVGYNSEHSVEMGDSVLKPDGSMETQRSKSQSDGVRDEGDIISKEAQTT 198 ++S +PWW+S+GYN G +V T + +DG D +++E Sbjct: 20 QTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDE 79 Query: 199 SVPESGSDGSYGPVYQHLQYVASTTPTTGGAYLVPHTEPELVGHSIACAPYPYSDPYYGG 378 + +S + S+G V + Q+ S P + + ELVGHSIACA PY DPYY G Sbjct: 80 TTKDSHA--SFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAG 137 Query: 379 LMNAYG-----PQALSMHHSRMPLPLDITEEPVYVNPKQYNGIMRRRQSRAKAELEKKLI 543 +M AYG P L M H+RM LPL++T+EPV+VN KQY GI+RRRQ+RAKAE+E KLI Sbjct: 138 VMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLI 197 Query: 544 KVRKPYLHESRHQHAIKRQRGCGGRFLNTKKVNHEPKLTPEEGVRYSKXXXXXXXXXXXX 723 KVRKPYLHESRHQHA++R RG GGRF + N ++ + Sbjct: 198 KVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS 257 Query: 724 XXXXXXXVQC-DASHGKEDVDEQLMKRDMTEPRTYSKEDGIGNSCYKQQQDFRLSAFQAP 900 + ++S+G+++ QL + E R+Y G+S + F+ S++ Sbjct: 258 DAAPCALAETWNSSNGQQESRTQL--HEAYEARSYMN----GSSQFHNYSSFQASSYGLR 311 Query: 901 AGERGEEGDCSGQLRGSISVRPASHRALTIQ 993 +GERG++GDCSGQ R SIS A+ R L I+ Sbjct: 312 SGERGDDGDCSGQQR-SISENQAAQRRLAIK 341 >ref|XP_002282778.2| PREDICTED: nuclear transcription factor Y subunit A-1 [Vitis vinifera] Length = 345 Score = 218 bits (554), Expect = 4e-54 Identities = 119/231 (51%), Positives = 148/231 (64%), Gaps = 13/231 (5%) Frame = +1 Query: 22 SSPSCQPWWQSVGYNSEHSVEMGDSVLK------PDGSMETQRSKSQSDG-VRDEGDIIS 180 SS +PWW+ VGYN + G + P+G E+ +S S+G + +E D Sbjct: 20 SSVYSEPWWRGVGYNPISTTMTGGNTNNSPSSECPNGGSESNDGQSHSNGGLNEEDDDSI 79 Query: 181 KEAQTTSVPESGSDGSYGPVYQHLQYVASTTPTTGGAYLVPHTEPELVGHSIACAPYPYS 360 KE+Q T+ S S+G+YG +Q+LQ++A L + ELVGHSIACA PY Sbjct: 80 KESQATA--SSQSNGNYGQEHQNLQHIAPNIQIGSSECLTQPPQLELVGHSIACASNPYQ 137 Query: 361 DPYYGGLMNAYGPQAL------SMHHSRMPLPLDITEEPVYVNPKQYNGIMRRRQSRAKA 522 DPYYGG+M AYGPQ L MH +RMPLPL++T++PVYVNPKQY+GI+RRRQSRAKA Sbjct: 138 DPYYGGMMTAYGPQPLVHPHLLGMHEARMPLPLEMTQDPVYVNPKQYHGILRRRQSRAKA 197 Query: 523 ELEKKLIKVRKPYLHESRHQHAIKRQRGCGGRFLNTKKVNHEPKLTPEEGV 675 ELEKKLIKVRKPYLHESRHQHA++R R GGRF K K EE V Sbjct: 198 ELEKKLIKVRKPYLHESRHQHALRRARSSGGRFAK-KSAAEASKHASEEKV 247