BLASTX nr result

ID: Coptis24_contig00007556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007556
         (1331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29866.3| unnamed protein product [Vitis vinifera]              242   1e-61
emb|CBI24892.3| unnamed protein product [Vitis vinifera]              230   7e-58
ref|XP_002278849.1| PREDICTED: nuclear transcription factor Y su...   230   7e-58
ref|XP_004143236.1| PREDICTED: nuclear transcription factor Y su...   218   2e-54
ref|XP_002282778.2| PREDICTED: nuclear transcription factor Y su...   218   4e-54

>emb|CBI29866.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  242 bits (618), Expect = 1e-61
 Identities = 146/336 (43%), Positives = 194/336 (57%), Gaps = 17/336 (5%)
 Frame = +1

Query: 37   QPWWQSVGYNSEHSVEMGDS------VLKPDGSMETQRSKSQSDGVRDEGDIISKEAQTT 198
            QPWW+ +G +      +G+S         P+G + T   KS++  V D G+   KE + T
Sbjct: 26   QPWWRGLGNDVISPDVLGESSPNSASAEHPNGGVGTIAIKSRAKVVTDNGNDPEKEMKIT 85

Query: 199  SVPESGSDGSYGPVYQHLQYVASTTPTTGGAY-LVPHTEPELVGHSIACAPYPYSDPYYG 375
                S SDGS G   +H Q   S  P T   Y L P ++ ELVGHSIACA YPYS+PYY 
Sbjct: 86   LA--SQSDGSCGQEQKHPQQAVSMMPMTMAEYHLAPPSQLELVGHSIACASYPYSEPYYT 143

Query: 376  GLMNAYGPQAL------SMHHSRMPLPLDITEEPVYVNPKQYNGIMRRRQSRAKAELEKK 537
            G++ AYGPQ L       ++ +RM LP+++ EEPVYVN KQY+GI+RRRQSRAKAELEKK
Sbjct: 144  GVIPAYGPQGLVQSQFLGVNVARMALPIEMAEEPVYVNAKQYHGILRRRQSRAKAELEKK 203

Query: 538  LIKVRKPYLHESRHQHAIKRQRGCGGRFLNTKKVNHEPKL-TPEEGVRYSKXXXXXXXXX 714
            LIKVRKPYLHESRHQHA++R RGCGGRFLNTKK++       P++G              
Sbjct: 204  LIKVRKPYLHESRHQHAMRRARGCGGRFLNTKKLDSNASYDMPDKG-----SDPDVNLST 258

Query: 715  XXXXXXXXXXVQCDASHGKEDVDEQLMKRDMTEPRTYSKE---DGIGNSCYKQQQDFRLS 885
                      +  ++S  ++     L  R  +    ++++    G GNSCY   Q F+LS
Sbjct: 259  RPISSSVSESLPSNSSRNEDSPTSHLDARGPSVQELHNRQIASHGNGNSCYPHNQGFQLS 318

Query: 886  AFQAPAGERGEEGDCSGQLRGSISVRPASHRALTIQ 993
             + +   +R EEGD +G+    I V  A HRALTI+
Sbjct: 319  TYHSLKDDRVEEGDHAGRQHERILVNRAPHRALTIK 354


>emb|CBI24892.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  230 bits (586), Expect = 7e-58
 Identities = 144/343 (41%), Positives = 193/343 (56%), Gaps = 18/343 (5%)
 Frame = +1

Query: 19   RSSPSC----QPWWQSVGYNSEHSVEMGDSVLKP------DGSMETQRSKSQSDGVRDEG 168
            +S+PS     QPWW  VG N+     +G S  K       +  + +   + Q++G  D+G
Sbjct: 76   KSNPSSTVYSQPWWHGVGNNAISPAALGGSPSKSTSVEHLNSHITSNGFQLQANGRLDDG 135

Query: 169  DIISKEAQTTSVPESGSDGSYGPVYQHLQYVASTTPTTGGAYLVPHTEPELVGHSIACAP 348
               +K  Q T   +S  DG  G  +QHL   AS+T      +L P+++ ELVGHSI    
Sbjct: 136  TTFNKGTQPTVALQS--DGRNGQEHQHLNPTASSTLPIMSEHLEPNSQMELVGHSIVLTS 193

Query: 349  YPYSDPYYGGLMNAYGPQAL------SMHHSRMPLPLDITEEPVYVNPKQYNGIMRRRQS 510
            YPY DP+  G+M +YGPQA+       MH  RMPLPL++ EEPVYVN KQY+GI+RRRQS
Sbjct: 194  YPYQDPHNVGIMTSYGPQAMVHPHLFGMHQPRMPLPLEMEEEPVYVNAKQYHGILRRRQS 253

Query: 511  RAKAELEKKLIKVRKPYLHESRHQHAIKRQRGCGGRFLNTKKV-NHEPKLTPEEG-VRYS 684
            RAKAELEKK IKVRKPYLHESRHQHA++R RGCGGRFLNTKK+ N++   T E+G V  +
Sbjct: 254  RAKAELEKKAIKVRKPYLHESRHQHAMRRARGCGGRFLNTKKLDNNDANTTAEKGSVSGA 313

Query: 685  KXXXXXXXXXXXXXXXXXXXVQCDASHGKEDVDEQLMKRDMTEPRTYSKEDGIGNSCYKQ 864
                                   D+S  +++   + + +DM E  TYS  +  G+     
Sbjct: 314  ALSTQSASSSGSEHLPTNSSRNLDSSSVQQEEKGRTI-QDMLEAHTYSNGNRNGHGL--- 369

Query: 865  QQDFRLSAFQAPAGERGEEGDCSGQLRGSISVRPASHRALTIQ 993
                  SA+ +  G  G  GDC GQ R ++ +  A HRAL I+
Sbjct: 370  -----SSAYHSSNGSEG--GDCFGQPRENMQLNTAPHRALPIK 405


>ref|XP_002278849.1| PREDICTED: nuclear transcription factor Y subunit A-1-like [Vitis
            vinifera]
          Length = 346

 Score =  230 bits (586), Expect = 7e-58
 Identities = 144/343 (41%), Positives = 193/343 (56%), Gaps = 18/343 (5%)
 Frame = +1

Query: 19   RSSPSC----QPWWQSVGYNSEHSVEMGDSVLKP------DGSMETQRSKSQSDGVRDEG 168
            +S+PS     QPWW  VG N+     +G S  K       +  + +   + Q++G  D+G
Sbjct: 17   KSNPSSTVYSQPWWHGVGNNAISPAALGGSPSKSTSVEHLNSHITSNGFQLQANGRLDDG 76

Query: 169  DIISKEAQTTSVPESGSDGSYGPVYQHLQYVASTTPTTGGAYLVPHTEPELVGHSIACAP 348
               +K  Q T   +S  DG  G  +QHL   AS+T      +L P+++ ELVGHSI    
Sbjct: 77   TTFNKGTQPTVALQS--DGRNGQEHQHLNPTASSTLPIMSEHLEPNSQMELVGHSIVLTS 134

Query: 349  YPYSDPYYGGLMNAYGPQAL------SMHHSRMPLPLDITEEPVYVNPKQYNGIMRRRQS 510
            YPY DP+  G+M +YGPQA+       MH  RMPLPL++ EEPVYVN KQY+GI+RRRQS
Sbjct: 135  YPYQDPHNVGIMTSYGPQAMVHPHLFGMHQPRMPLPLEMEEEPVYVNAKQYHGILRRRQS 194

Query: 511  RAKAELEKKLIKVRKPYLHESRHQHAIKRQRGCGGRFLNTKKV-NHEPKLTPEEG-VRYS 684
            RAKAELEKK IKVRKPYLHESRHQHA++R RGCGGRFLNTKK+ N++   T E+G V  +
Sbjct: 195  RAKAELEKKAIKVRKPYLHESRHQHAMRRARGCGGRFLNTKKLDNNDANTTAEKGSVSGA 254

Query: 685  KXXXXXXXXXXXXXXXXXXXVQCDASHGKEDVDEQLMKRDMTEPRTYSKEDGIGNSCYKQ 864
                                   D+S  +++   + + +DM E  TYS  +  G+     
Sbjct: 255  ALSTQSASSSGSEHLPTNSSRNLDSSSVQQEEKGRTI-QDMLEAHTYSNGNRNGHGL--- 310

Query: 865  QQDFRLSAFQAPAGERGEEGDCSGQLRGSISVRPASHRALTIQ 993
                  SA+ +  G  G  GDC GQ R ++ +  A HRAL I+
Sbjct: 311  -----SSAYHSSNGSEG--GDCFGQPRENMQLNTAPHRALPIK 346


>ref|XP_004143236.1| PREDICTED: nuclear transcription factor Y subunit A-1-like [Cucumis
           sativus] gi|449482511|ref|XP_004156306.1| PREDICTED:
           nuclear transcription factor Y subunit A-1-like [Cucumis
           sativus]
          Length = 341

 Score =  218 bits (556), Expect = 2e-54
 Identities = 128/331 (38%), Positives = 181/331 (54%), Gaps = 6/331 (1%)
 Frame = +1

Query: 19  RSSPSCQPWWQSVGYNSEHSVEMGDSVLKPDGSMETQRSKSQSDGVRDEGDIISKEAQTT 198
           ++S   +PWW+S+GYN       G +V        T  +   +DG     D +++E    
Sbjct: 20  QTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDE 79

Query: 199 SVPESGSDGSYGPVYQHLQYVASTTPTTGGAYLVPHTEPELVGHSIACAPYPYSDPYYGG 378
           +  +S +  S+G V  + Q+  S  P      +    + ELVGHSIACA  PY DPYY G
Sbjct: 80  TTKDSHA--SFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAG 137

Query: 379 LMNAYG-----PQALSMHHSRMPLPLDITEEPVYVNPKQYNGIMRRRQSRAKAELEKKLI 543
           +M AYG     P  L M H+RM LPL++T+EPV+VN KQY GI+RRRQ+RAKAE+E KLI
Sbjct: 138 VMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLI 197

Query: 544 KVRKPYLHESRHQHAIKRQRGCGGRFLNTKKVNHEPKLTPEEGVRYSKXXXXXXXXXXXX 723
           KVRKPYLHESRHQHA++R RG GGRF    + N       ++     +            
Sbjct: 198 KVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGS 257

Query: 724 XXXXXXXVQC-DASHGKEDVDEQLMKRDMTEPRTYSKEDGIGNSCYKQQQDFRLSAFQAP 900
                   +  ++S+G+++   QL   +  E R+Y      G+S +     F+ S++   
Sbjct: 258 DAAPCALAETWNSSNGQQESRTQL--HEAYEARSYMN----GSSQFHNYSSFQASSYGLR 311

Query: 901 AGERGEEGDCSGQLRGSISVRPASHRALTIQ 993
           +GERG++GDCSGQ R SIS   A+ R L I+
Sbjct: 312 SGERGDDGDCSGQQR-SISENQAAQRRLAIK 341


>ref|XP_002282778.2| PREDICTED: nuclear transcription factor Y subunit A-1 [Vitis
           vinifera]
          Length = 345

 Score =  218 bits (554), Expect = 4e-54
 Identities = 119/231 (51%), Positives = 148/231 (64%), Gaps = 13/231 (5%)
 Frame = +1

Query: 22  SSPSCQPWWQSVGYNSEHSVEMGDSVLK------PDGSMETQRSKSQSDG-VRDEGDIIS 180
           SS   +PWW+ VGYN   +   G +         P+G  E+   +S S+G + +E D   
Sbjct: 20  SSVYSEPWWRGVGYNPISTTMTGGNTNNSPSSECPNGGSESNDGQSHSNGGLNEEDDDSI 79

Query: 181 KEAQTTSVPESGSDGSYGPVYQHLQYVASTTPTTGGAYLVPHTEPELVGHSIACAPYPYS 360
           KE+Q T+   S S+G+YG  +Q+LQ++A          L    + ELVGHSIACA  PY 
Sbjct: 80  KESQATA--SSQSNGNYGQEHQNLQHIAPNIQIGSSECLTQPPQLELVGHSIACASNPYQ 137

Query: 361 DPYYGGLMNAYGPQAL------SMHHSRMPLPLDITEEPVYVNPKQYNGIMRRRQSRAKA 522
           DPYYGG+M AYGPQ L       MH +RMPLPL++T++PVYVNPKQY+GI+RRRQSRAKA
Sbjct: 138 DPYYGGMMTAYGPQPLVHPHLLGMHEARMPLPLEMTQDPVYVNPKQYHGILRRRQSRAKA 197

Query: 523 ELEKKLIKVRKPYLHESRHQHAIKRQRGCGGRFLNTKKVNHEPKLTPEEGV 675
           ELEKKLIKVRKPYLHESRHQHA++R R  GGRF   K      K   EE V
Sbjct: 198 ELEKKLIKVRKPYLHESRHQHALRRARSSGGRFAK-KSAAEASKHASEEKV 247


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