BLASTX nr result

ID: Coptis24_contig00007537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007537
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    76   2e-11
gb|ADV19264.1| hypothetical protein-like protein [Helleborus ori...    74   4e-11
ref|XP_002516841.1| NADH dehydrogenase, putative [Ricinus commun...    70   8e-10
ref|XP_002311809.1| predicted protein [Populus trichocarpa] gi|1...    70   1e-09
ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    69   1e-09

>ref|XP_002278120.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B isoform 2 [Vitis vinifera]
           gi|225432428|ref|XP_002278102.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B isoform 1 [Vitis vinifera]
           gi|297736935|emb|CBI26136.3| unnamed protein product
           [Vitis vinifera]
          Length = 106

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = -2

Query: 680 IQQTCTKEMDAYAGCIYYHTNEFDLCCREQQEFENACP 567
           + Q CTKEMDAYAGC+YYHTNEFDLC +EQQEFE ACP
Sbjct: 67  LHQRCTKEMDAYAGCMYYHTNEFDLCRKEQQEFEKACP 104


>gb|ADV19264.1| hypothetical protein-like protein [Helleborus orientalis]
          Length = 110

 Score = 74.3 bits (181), Expect = 4e-11
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -2

Query: 680 IQQTCTKEMDAYAGCIYYHTNEFDLCCREQQEFENACPF 564
           + QTCTKEMDAYAGC+YY+TNEFDLC +EQQEFE  CP+
Sbjct: 70  LHQTCTKEMDAYAGCMYYNTNEFDLCRKEQQEFEKVCPW 108


>ref|XP_002516841.1| NADH dehydrogenase, putative [Ricinus communis]
           gi|223543929|gb|EEF45455.1| NADH dehydrogenase, putative
           [Ricinus communis]
          Length = 106

 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = -2

Query: 680 IQQTCTKEMDAYAGCIYYHTNEFDLCCREQQEFENACP 567
           +   CTKEMDAY GC+YYHTNEFDLC +EQQ FE ACP
Sbjct: 67  LHHRCTKEMDAYVGCMYYHTNEFDLCRKEQQAFEKACP 104


>ref|XP_002311809.1| predicted protein [Populus trichocarpa] gi|118483508|gb|ABK93652.1|
           unknown [Populus trichocarpa]
           gi|118487086|gb|ABK95373.1| unknown [Populus
           trichocarpa] gi|222851629|gb|EEE89176.1| predicted
           protein [Populus trichocarpa]
          Length = 107

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -2

Query: 680 IQQTCTKEMDAYAGCIYYHTNEFDLCCREQQEFENACP 567
           + Q CTKEMDAY GC+YY+TNEFDLC +EQQ FE ACP
Sbjct: 68  LHQKCTKEMDAYVGCMYYYTNEFDLCRKEQQAFEKACP 105


>ref|XP_004135555.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-B-like [Cucumis sativus]
           gi|449488520|ref|XP_004158067.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 alpha subcomplex subunit
           8-B-like [Cucumis sativus]
          Length = 106

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 27/38 (71%), Positives = 31/38 (81%)
 Frame = -2

Query: 680 IQQTCTKEMDAYAGCIYYHTNEFDLCCREQQEFENACP 567
           + Q CTKEMDAY GC+YYHTNEFDLC +EQ+ FE  CP
Sbjct: 67  LHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCP 104


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