BLASTX nr result

ID: Coptis24_contig00007522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007522
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21500.3| unnamed protein product [Vitis vinifera]              184   1e-58
ref|XP_002280199.1| PREDICTED: uncharacterized protein LOC100256...   184   1e-58
ref|XP_002310021.1| predicted protein [Populus trichocarpa] gi|2...   179   6e-56
ref|XP_002873433.1| hypothetical protein ARALYDRAFT_487824 [Arab...   187   3e-55
ref|XP_004142034.1| PREDICTED: uncharacterized protein LOC101204...   169   6e-52

>emb|CBI21500.3| unnamed protein product [Vitis vinifera]
          Length = 266

 Score =  184 bits (468), Expect(2) = 1e-58
 Identities = 112/202 (55%), Positives = 137/202 (67%), Gaps = 13/202 (6%)
 Frame = +1

Query: 52  MSPAINMQLSNPASKSSLQTNTNITNFKFKLQNLHSQQRPSNLRFPKHLHFSSLSIQSD- 228
           MS  + +Q+SNPA K +        +      NL S +R S    P    F+ LS++S+ 
Sbjct: 19  MSSTLRLQVSNPAIKPN--------DAHTLAGNLFSCRRLSGTGPPAR-RFTCLSLKSNN 69

Query: 229 ----------APLLTTSVGSPPPSL--SQWNLTNRHITLLNAVACVAAISTSWLFFSAIP 372
                     +   T+SVGS P SL  SQWNLT+RHI +LN +A   AIS +WLF SAIP
Sbjct: 70  AASPELQSFVSSQFTSSVGSSPSSLQLSQWNLTHRHIEVLNVIALATAISATWLFCSAIP 129

Query: 373 ALLAFRKAALSLEKLMDVMREELPDTMAAVRLSGMEISDLTMELSDLGQEITKGVRNSTQ 552
            LLAF++AA SLEKL+DV REELP TMAAVRLSGMEISDLTMELSDLGQEIT+GVR+ST+
Sbjct: 130 TLLAFKRAAESLEKLLDVTREELPGTMAAVRLSGMEISDLTMELSDLGQEITQGVRSSTR 189

Query: 553 AVRVAEDRLRRLTTMVPNGASQ 618
           AVR+AE+RLRRLT M P+   Q
Sbjct: 190 AVRMAEERLRRLTNMTPSATVQ 211



 Score = 69.7 bits (169), Expect(2) = 1e-58
 Identities = 30/49 (61%), Positives = 41/49 (83%)
 Frame = +2

Query: 728 NLKTEAIEPVLAKTARGVREGIVKGRAFLQMFFSITRFSRLAINYLAAR 874
           N K EA +P+LA+TARG++EGIVKGR+F Q+FF++TR S++A NY A R
Sbjct: 215 NQKIEAADPLLARTARGIKEGIVKGRSFFQLFFTLTRLSKMAFNYFATR 263


>ref|XP_002280199.1| PREDICTED: uncharacterized protein LOC100256131 [Vitis vinifera]
           gi|147858475|emb|CAN81396.1| hypothetical protein
           VITISV_013367 [Vitis vinifera]
          Length = 248

 Score =  184 bits (468), Expect(2) = 1e-58
 Identities = 112/202 (55%), Positives = 137/202 (67%), Gaps = 13/202 (6%)
 Frame = +1

Query: 52  MSPAINMQLSNPASKSSLQTNTNITNFKFKLQNLHSQQRPSNLRFPKHLHFSSLSIQSD- 228
           MS  + +Q+SNPA K +        +      NL S +R S    P    F+ LS++S+ 
Sbjct: 1   MSSTLRLQVSNPAIKPN--------DAHTLAGNLFSCRRLSGTGPPAR-RFTCLSLKSNN 51

Query: 229 ----------APLLTTSVGSPPPSL--SQWNLTNRHITLLNAVACVAAISTSWLFFSAIP 372
                     +   T+SVGS P SL  SQWNLT+RHI +LN +A   AIS +WLF SAIP
Sbjct: 52  AASPELQSFVSSQFTSSVGSSPSSLQLSQWNLTHRHIEVLNVIALATAISATWLFCSAIP 111

Query: 373 ALLAFRKAALSLEKLMDVMREELPDTMAAVRLSGMEISDLTMELSDLGQEITKGVRNSTQ 552
            LLAF++AA SLEKL+DV REELP TMAAVRLSGMEISDLTMELSDLGQEIT+GVR+ST+
Sbjct: 112 TLLAFKRAAESLEKLLDVTREELPGTMAAVRLSGMEISDLTMELSDLGQEITQGVRSSTR 171

Query: 553 AVRVAEDRLRRLTTMVPNGASQ 618
           AVR+AE+RLRRLT M P+   Q
Sbjct: 172 AVRMAEERLRRLTNMTPSATVQ 193



 Score = 69.7 bits (169), Expect(2) = 1e-58
 Identities = 30/49 (61%), Positives = 41/49 (83%)
 Frame = +2

Query: 728 NLKTEAIEPVLAKTARGVREGIVKGRAFLQMFFSITRFSRLAINYLAAR 874
           N K EA +P+LA+TARG++EGIVKGR+F Q+FF++TR S++A NY A R
Sbjct: 197 NQKIEAADPLLARTARGIKEGIVKGRSFFQLFFTLTRLSKMAFNYFATR 245


>ref|XP_002310021.1| predicted protein [Populus trichocarpa] gi|222852924|gb|EEE90471.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  179 bits (455), Expect(2) = 6e-56
 Identities = 92/127 (72%), Positives = 108/127 (85%), Gaps = 3/127 (2%)
 Frame = +1

Query: 247 SVGSPPPS---LSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFRKAALSLEKL 417
           +VG P  S   LSQWNLT+RH+ +LN +AC AA+S +WLF SAIP LLAF++AA SLEKL
Sbjct: 23  TVGLPSSSVLQLSQWNLTHRHVLVLNVIACAAAVSATWLFLSAIPTLLAFKRAAESLEKL 82

Query: 418 MDVMREELPDTMAAVRLSGMEISDLTMELSDLGQEITKGVRNSTQAVRVAEDRLRRLTTM 597
           MDV REELPDTMAAVRLSGMEISDLTMELSDLGQEIT+GVR+ST+AVRVAE+RLR+LT +
Sbjct: 83  MDVTREELPDTMAAVRLSGMEISDLTMELSDLGQEITQGVRSSTRAVRVAEERLRQLTNI 142

Query: 598 VPNGASQ 618
            P  + Q
Sbjct: 143 TPTASLQ 149



 Score = 65.5 bits (158), Expect(2) = 6e-56
 Identities = 31/51 (60%), Positives = 40/51 (78%)
 Frame = +2

Query: 731 LKTEAIEPVLAKTARGVREGIVKGRAFLQMFFSITRFSRLAINYLAARKQK 883
           LK E   P LA+TARG+REGIVKGR+ LQ+FF+I +FSR+A NY A + +K
Sbjct: 154 LKNETGGPALARTARGMREGIVKGRSILQIFFTIIQFSRMAFNYFAKQNKK 204


>ref|XP_002873433.1| hypothetical protein ARALYDRAFT_487824 [Arabidopsis lyrata subsp.
           lyrata] gi|297319270|gb|EFH49692.1| hypothetical protein
           ARALYDRAFT_487824 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score =  187 bits (474), Expect(2) = 3e-55
 Identities = 111/196 (56%), Positives = 132/196 (67%), Gaps = 16/196 (8%)
 Frame = +1

Query: 79  SNPASKSSLQTNTNITNFKFKLQNLHSQQRPS-NLRFPKHLHFS---SLSIQSDAPL--- 237
           SN  S   L     I ++ F  +NL  ++R +  L FP   +     S++  S +PL   
Sbjct: 6   SNLQSPKRLIFWNPILHYGFIDKNLSFRRRDTLRLAFPISRYAKGSESIASSSPSPLYSN 65

Query: 238 ---------LTTSVGSPPPSLSQWNLTNRHITLLNAVACVAAISTSWLFFSAIPALLAFR 390
                     T+SVG PP  LSQW  T +H  LLN VACV AIS SWLFF+AIP LLAF+
Sbjct: 66  PQEPSISSQFTSSVGQPPLQLSQWTFTQKHFVLLNVVACVTAISASWLFFAAIPTLLAFK 125

Query: 391 KAALSLEKLMDVMREELPDTMAAVRLSGMEISDLTMELSDLGQEITKGVRNSTQAVRVAE 570
           KAA SLEKL+DV REELPDTMAAVRLSGMEISDLTMELSDLGQ IT+GV++ST+A+RVAE
Sbjct: 126 KAAESLEKLLDVTREELPDTMAAVRLSGMEISDLTMELSDLGQGITQGVKSSTRAIRVAE 185

Query: 571 DRLRRLTTMVPNGASQ 618
           DRLRRLT M P  + Q
Sbjct: 186 DRLRRLTNMNPVASMQ 201



 Score = 55.8 bits (133), Expect(2) = 3e-55
 Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = +2

Query: 704 PWFQMEQV--NLKTEAIEPVLAKTARGVREGIVKGRAFLQMFFSITRFSRLAINYLAARK 877
           P   M++V    KTE  EP++A+ AR ++EGIVKGR+  Q+  +ITRFS+ A +YLA R 
Sbjct: 196 PVASMQEVMHRTKTEETEPMVARKARSLKEGIVKGRSLWQLLSTITRFSQTATSYLAKRA 255

Query: 878 QK 883
           ++
Sbjct: 256 KQ 257


>ref|XP_004142034.1| PREDICTED: uncharacterized protein LOC101204218 [Cucumis sativus]
          Length = 288

 Score =  169 bits (428), Expect(2) = 6e-52
 Identities = 95/159 (59%), Positives = 113/159 (71%), Gaps = 9/159 (5%)
 Frame = +1

Query: 169 PSNLRFPKH------LHFSSLSIQSDAPLLTTSVGSPPPSLSQW---NLTNRHITLLNAV 321
           P NL  P        +   SLS  S +   T ++G+  P+  Q+    LT RHI +LN V
Sbjct: 73  PYNLGLPNRQLPSLSIRAQSLSDPSTSSRYTDTIGTSSPAFLQFPQCTLTQRHILVLNVV 132

Query: 322 ACVAAISTSWLFFSAIPALLAFRKAALSLEKLMDVMREELPDTMAAVRLSGMEISDLTME 501
           AC  AIS +WLF SAIP LLAF++AA SLEKLMDV REE+P TMAA+RLSGMEISDLTME
Sbjct: 133 ACATAISATWLFCSAIPTLLAFKRAAESLEKLMDVTREEIPGTMAAIRLSGMEISDLTME 192

Query: 502 LSDLGQEITKGVRNSTQAVRVAEDRLRRLTTMVPNGASQ 618
           LSDLGQ IT+GVR+ST+AVRVAE+RLRRLT M P  + Q
Sbjct: 193 LSDLGQGITQGVRSSTRAVRVAEERLRRLTNMSPTASVQ 231



 Score = 62.4 bits (150), Expect(2) = 6e-52
 Identities = 29/57 (50%), Positives = 40/57 (70%)
 Frame = +2

Query: 713 QMEQVNLKTEAIEPVLAKTARGVREGIVKGRAFLQMFFSITRFSRLAINYLAARKQK 883
           +M   NL     EPVLAK A+ ++EGI+KGR+  Q+F S+TRFS LA+NY + R +K
Sbjct: 232 EMTITNLGVRGAEPVLAKRAKDIKEGILKGRSIFQLFLSLTRFSGLALNYFSKRGKK 288


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