BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007504
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635617.1| PREDICTED: F-box protein FBW2-like [Vitis vi...    66   3e-20
emb|CAN65997.1| hypothetical protein VITISV_007694 [Vitis vinifera]    64   1e-19
ref|XP_002510806.1| conserved hypothetical protein [Ricinus comm...    61   8e-18
ref|XP_002262912.1| PREDICTED: F-box/LRR-repeat protein At3g4888...    58   4e-17
emb|CBI31784.3| unnamed protein product [Vitis vinifera]               58   4e-17

>ref|XP_003635617.1| PREDICTED: F-box protein FBW2-like [Vitis vinifera]
          Length = 305

 Score = 66.2 bits (160), Expect(2) = 3e-20
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
 Frame = -1

Query: 786 RAWEDLNKDVLITIYQKMDLKDLIVGAPLCCTSWYKASKDPSVWRDIDFSLSIEYFLFTR 607
           R WE+LN D+L+ ++ ++ ++ L++  P  C SWYKAS++P  W  + F   I+      
Sbjct: 4   RKWEELNMDILVNVFGRVGMESLLLDVPFVCKSWYKASREPQCWEHLIFPEYIKSDDIWE 63

Query: 606 RGMPIKYPCDYFLDNKHD--EVTQLIEFVVNRSHGSMTSIK 490
              P +   +  +    +   VT  ++F+VNRS G  T IK
Sbjct: 64  EDSPDRGFAERLVTTYQENLSVTAFMKFIVNRSGGCATIIK 104



 Score = 59.3 bits (142), Expect(2) = 3e-20
 Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
 Frame = -3

Query: 385 FGKETVCVAISNLKELEGMDVQNEFID----ETILEQIDEFCPNFTKLKIA-GRVQENTA 221
           F  E +   +S  K LE M +    +     +++L QI   C NF  L      ++++ A
Sbjct: 134 FSMEDIIPKLSKWKSLELMRLGKFHVGLFHMKSVLPQIGLHCNNFIWLSAPHASIEKDEA 193

Query: 220 TLISKSLPKLRVLDISGTRIGRLALLVILKGCKELEHLDVSRCSPDWGRYRPLSEVIDGD 41
           + I  SLP+L+ LD+  +   + AL++IL+GCK+L HLDV +C              D D
Sbjct: 194 SAIVASLPRLKYLDLHYSFFEKEALVMILQGCKKLVHLDVRKC----------FGFCDDD 243

Query: 40  DEIRKSAYHLKVF 2
            EI + A H+ VF
Sbjct: 244 AEILELASHIPVF 256


>emb|CAN65997.1| hypothetical protein VITISV_007694 [Vitis vinifera]
          Length = 1670

 Score = 63.9 bits (154), Expect(2) = 1e-19
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
 Frame = -1

Query: 786 RAWEDLNKDVLITIYQKMDLKDLIVGAPLCCTSWYKASKDPSVWRDIDFSLSIEYFLFTR 607
           R WE+LN D+L+ ++ ++ ++ L++  P  C  WYKAS++P  W  + F   I+      
Sbjct: 4   RKWEELNMDILVNVFGRVGMESLLLDVPFVCKXWYKASREPQCWEHLIFPEYIKXDDIWX 63

Query: 606 RGMPIKYPCDYFLDNKHD--EVTQLIEFVVNRSHGSMTSIK 490
              P +   +  +    +   VT  + F+VNRS G  T IK
Sbjct: 64  EDSPDRGFAERLVTTYQENLSVTAFMXFIVNRSXGCATIIK 104



 Score = 59.3 bits (142), Expect(2) = 1e-19
 Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
 Frame = -3

Query: 385 FGKETVCVAISNLKELEGMDVQNEFID----ETILEQIDEFCPNFTKLKIA-GRVQENTA 221
           F  E +   +S  K LE M +    +     +++L QI   C NF  L      ++++ A
Sbjct: 134 FSMEDIIPKLSKWKSLELMRLGKFHVGLFHMKSVLPQIGLHCNNFIWLSAPHASIEKDEA 193

Query: 220 TLISKSLPKLRVLDISGTRIGRLALLVILKGCKELEHLDVSRCSPDWGRYRPLSEVIDGD 41
           + I  SLP+L+ LD+  +   + AL++IL+GCK+L HLDV +C              D D
Sbjct: 194 SAIVASLPRLKYLDLHYSFFEKEALVMILQGCKKLVHLDVRKC----------FGFCDDD 243

Query: 40  DEIRKSAYHLKVF 2
            EI + A H+ VF
Sbjct: 244 AEILELASHIPVF 256


>ref|XP_002510806.1| conserved hypothetical protein [Ricinus communis]
           gi|223549921|gb|EEF51408.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 61.2 bits (147), Expect(2) = 8e-18
 Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
 Frame = -1

Query: 786 RAWEDLNKDVLITIYQKMDLKDLIVGAPLCCTSWYKASKDPSVWRDIDFSLSIEYFLFTR 607
           R WEDL+ D+L+ I+Q  D+  L  G    C+SW  A  DP +W+ +D S+    F    
Sbjct: 20  RRWEDLDTDILVKIFQSFDIFQLTSGIAHVCSSWRLACCDPLLWKTLDLSMLKSNF---- 75

Query: 606 RGMPIKYPCD--YFLDNKHDE-VTQLIEFVVNRSHGSMTSI 493
               IK P +   ++D + D+ +T++++  +N S G++TS+
Sbjct: 76  ----IKIPLEPYVYVDGRSDKTLTRVLKISLNLSQGNITSL 112



 Score = 56.2 bits (134), Expect(2) = 8e-18
 Identities = 32/96 (33%), Positives = 56/96 (58%)
 Frame = -3

Query: 379 KETVCVAISNLKELEGMDVQNEFIDETILEQIDEFCPNFTKLKIAGRVQENTATLISKSL 200
           K  +C AI   ++LE + + +      ++E+I   C NF++LKI G  +   A+ ++  L
Sbjct: 148 KTGICKAIRMWRDLESLTMPSIANPPYLIEEIANNCRNFSELKIMGPFEIFFASTLAAYL 207

Query: 199 PKLRVLDISGTRIGRLALLVILKGCKELEHLDVSRC 92
           PKLRVL +  + + + AL++IL   + LE L++S C
Sbjct: 208 PKLRVLSLRCSMLIKDALILILDSLQSLEVLNISHC 243


>ref|XP_002262912.1| PREDICTED: F-box/LRR-repeat protein At3g48880 [Vitis vinifera]
           gi|147841766|emb|CAN62210.1| hypothetical protein
           VITISV_008091 [Vitis vinifera]
          Length = 321

 Score = 58.2 bits (139), Expect(2) = 4e-17
 Identities = 29/98 (29%), Positives = 54/98 (55%)
 Frame = -1

Query: 786 RAWEDLNKDVLITIYQKMDLKDLIVGAPLCCTSWYKASKDPSVWRDIDFSLSIEYFLFTR 607
           R WED++ D+L+ I+Q  D+ +L  G    C  W  A+ DP +W+ +D +    +F+   
Sbjct: 20  RKWEDMDIDILVKIFQSFDIFELTSGIAHVCRVWRMAACDPFLWKTLDLTKLESHFI--- 76

Query: 606 RGMPIKYPCDYFLDNKHDEVTQLIEFVVNRSHGSMTSI 493
             +P++ P  Y  D     +T+L++  +N S G++ S+
Sbjct: 77  -KIPLE-PYVYVSDQSDKSLTRLLKISLNLSQGNIRSL 112



 Score = 57.0 bits (136), Expect(2) = 4e-17
 Identities = 33/96 (34%), Positives = 54/96 (56%)
 Frame = -3

Query: 379 KETVCVAISNLKELEGMDVQNEFIDETILEQIDEFCPNFTKLKIAGRVQENTATLISKSL 200
           K  +C AI   K+LE + + +      ++E+I + C NF +LKI G      A  +   L
Sbjct: 148 KSGICKAIRMWKDLESLTMPSIENPPYLMEEISKNCNNFRELKIMGPCHVFFANTLVAFL 207

Query: 199 PKLRVLDISGTRIGRLALLVILKGCKELEHLDVSRC 92
           P+L++L +  + + + ALL IL+G K LE L++S C
Sbjct: 208 PRLKILSLRCSVLLKEALLSILEGLKHLEVLNISHC 243


>emb|CBI31784.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score = 58.2 bits (139), Expect(2) = 4e-17
 Identities = 29/98 (29%), Positives = 54/98 (55%)
 Frame = -1

Query: 786 RAWEDLNKDVLITIYQKMDLKDLIVGAPLCCTSWYKASKDPSVWRDIDFSLSIEYFLFTR 607
           R WED++ D+L+ I+Q  D+ +L  G    C  W  A+ DP +W+ +D +    +F+   
Sbjct: 9   RKWEDMDIDILVKIFQSFDIFELTSGIAHVCRVWRMAACDPFLWKTLDLTKLESHFI--- 65

Query: 606 RGMPIKYPCDYFLDNKHDEVTQLIEFVVNRSHGSMTSI 493
             +P++ P  Y  D     +T+L++  +N S G++ S+
Sbjct: 66  -KIPLE-PYVYVSDQSDKSLTRLLKISLNLSQGNIRSL 101



 Score = 57.0 bits (136), Expect(2) = 4e-17
 Identities = 33/96 (34%), Positives = 54/96 (56%)
 Frame = -3

Query: 379 KETVCVAISNLKELEGMDVQNEFIDETILEQIDEFCPNFTKLKIAGRVQENTATLISKSL 200
           K  +C AI   K+LE + + +      ++E+I + C NF +LKI G      A  +   L
Sbjct: 137 KSGICKAIRMWKDLESLTMPSIENPPYLMEEISKNCNNFRELKIMGPCHVFFANTLVAFL 196

Query: 199 PKLRVLDISGTRIGRLALLVILKGCKELEHLDVSRC 92
           P+L++L +  + + + ALL IL+G K LE L++S C
Sbjct: 197 PRLKILSLRCSVLLKEALLSILEGLKHLEVLNISHC 232