BLASTX nr result
ID: Coptis24_contig00007493
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007493
(1552 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi... 198 4e-48
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm... 194 4e-47
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2... 179 2e-42
gb|ABK92768.1| unknown [Populus trichocarpa] 179 2e-42
ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cuc... 171 5e-40
>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
gi|296088512|emb|CBI37503.3| unnamed protein product
[Vitis vinifera]
Length = 378
Score = 198 bits (503), Expect = 4e-48
Identities = 142/432 (32%), Positives = 213/432 (49%), Gaps = 14/432 (3%)
Frame = +1
Query: 28 MEKDTIS-EVLSRLPAKSLLRFESVSKGWRDLISNNSFRRLQCHXXXXXXXXXXXXXXXX 204
ME D I +VLSRLP K+LL + V K WR +IS+ SF +
Sbjct: 1 MESDDICMDVLSRLPTKTLLGLKCVCKRWRRIISDRSFIQ-------------------- 40
Query: 205 XXXXXXXXXXXXXXLQCHRVKTVTSGFFFQDTW-----DVPYPVKYFSVKNDQAILQDTV 369
+ +GFFFQ+ + D+ + Y + +Q T+
Sbjct: 41 ---------------DLLQRPEPLAGFFFQERYQWCDEDIS-TISYIPATMEGTQVQQTI 84
Query: 370 LDFLPEMVGLIASSNGLLCCKSCDDSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFAL 549
FLPE V ++ S NGL+CC+S S D I+VCNP K+++++ + L
Sbjct: 85 FSFLPEDVVILGSCNGLVCCRSVFPSP--DPSIFVCNPSNKQWIRL-LETTPDKESSYGL 141
Query: 550 AFDPFCYPVDELSNFKLACVCKETL-----LTILLQVYSSKTKEWSKLELRVCGDNYNCV 714
AF+PF P+D +NFK+ V + ++YSS+ W K + +C N+N
Sbjct: 142 AFNPFQSPIDMPTNFKVVRVSQAQTDMDDDSYFSFEIYSSQAGAWKKSK-EICQCNHNLF 200
Query: 715 PDGQVVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGESNDRLH 894
+ + +F G+L+W+T GD +L+F++ E + P I+ + + E+CIGES RLH
Sbjct: 201 KN-KGIFVGGILHWLTDGDQVLSFNIENELSWLISAPFPTIHLT-AIPEMCIGESRGRLH 258
Query: 895 FIVISEAGFQVWLMDS--EPKWVLKHLISLSEMEEGNPHFLYNDAKRAARLVPDDFVIPT 1068
+I+ISE G QVW ++ + W L H +L MEE N LYN R A+ + D +
Sbjct: 259 YIMISEDGLQVWALEDYYDSNWSLVHSTTLEVMEEENSQLLYNTRDRVAQRISIDSI--P 316
Query: 1069 WIEPLVYKDGTLLVKLRCNYSYQNEELEVCTKIYLYNFETRTMLELFSIDKLGSQLGF-L 1245
W++PL +KDG LL++ V TKI LY TR M EL ++ KLG F
Sbjct: 317 WMDPLAFKDGLLLMR-------------VSTKIILYCIGTRKMEELCNLSKLGRNSIFGP 363
Query: 1246 RALPYSMSLAPL 1281
+PYS++LAPL
Sbjct: 364 LVIPYSLNLAPL 375
>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
gi|223535221|gb|EEF36899.1| conserved hypothetical
protein [Ricinus communis]
Length = 375
Score = 194 bits (494), Expect = 4e-47
Identities = 142/426 (33%), Positives = 204/426 (47%), Gaps = 8/426 (1%)
Frame = +1
Query: 28 MEKDTISEVLSRLPAKSLLRFESVSKGWRDLISNNSFRRLQCHXXXXXXXXXXXXXXXXX 207
+ D +VLSR PAK L+ + VSKGW+ LI N SF ++Q
Sbjct: 8 LNTDISFDVLSRFPAKDLVELKRVSKGWQHLIMNQSFIQIQS------------------ 49
Query: 208 XXXXXXXXXXXXXLQCHRVKTVTSGFFFQDT-----WDVPYPVKYFSVKNDQAILQDTVL 372
R + SGFFFQ +D+ + Y VK + L V
Sbjct: 50 -----------------RRREPLSGFFFQQRFQWSEYDIE-TINYIPVKWEGLELHKKVF 91
Query: 373 DFLPEMVGLIASSNGLLCCKSCDDSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALA 552
DFLP+ V L+ + NGL+CC+SC I+VCNP+ KE+V+++W + H ALA
Sbjct: 92 DFLPQDVVLLTTCNGLVCCRSCFPFEL--PAIFVCNPLNKEWVKLDWTEPDKEH-SIALA 148
Query: 553 FDPFCYPVDELSNFKLACVCKETLLTILLQVYSSKTKEWSKLELRVCGDNYNCVPDGQVV 732
FDP +NFKL + L +YSS+T W+ L +C N N + + V
Sbjct: 149 FDPLLDISGNSANFKL-----DEQLYFSFDIYSSRTGSWN-LSKDICWCNSN-LHKNKGV 201
Query: 733 FASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGESNDRLHFIVISE 912
+ G+L+W+T D IL FDV E + PV S + CIGE LH+++ISE
Sbjct: 202 YIRGVLHWLTDEDQILTFDVDNELAFLISAPVPAAEFSTA-PKACIGELEGCLHYVMISE 260
Query: 913 AGFQVWLMDS--EPKWVLKHLISLSEMEEGNPHFLYNDAKRAARLVPDDFVIPTWIEPLV 1086
GF +W ++ E W+LK+ +L+EME+ +P FL N + + DD + W++ L
Sbjct: 261 EGFHIWSLEDYFELNWLLKYSKTLAEMEQEHPKFLLNMQELVKLQMTDD--VSPWVDSLA 318
Query: 1087 YKDGTLLVKLRCNYSYQNEELEVCTKIYLYNFETRTMLELFSIDKLG-SQLGFLRALPYS 1263
+KDG L+ L V T +YLY+ M E+ K G S + LPYS
Sbjct: 319 FKDGILV-------------LRVSTIVYLYDIIRSKMQEVCDNSKFGTSSMYCPTVLPYS 365
Query: 1264 MSLAPL 1281
M+L PL
Sbjct: 366 MTLVPL 371
>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
predicted protein [Populus trichocarpa]
Length = 424
Score = 179 bits (454), Expect = 2e-42
Identities = 138/433 (31%), Positives = 208/433 (48%), Gaps = 14/433 (3%)
Frame = +1
Query: 28 MEKDTISEVLSRLPAKSLLRFESVSKGWRDLISNNSFRRLQCHXXXXXXXXXXXXXXXXX 207
++ D +VLSRL K LL + VSKGW+DLIS+ SF + Q
Sbjct: 7 LDTDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQK---------------- 50
Query: 208 XXXXXXXXXXXXXLQCHRVKTVTSGFFFQDTW----DVPYPVKYFSVKNDQAILQDTVLD 375
K SGFFFQ D + YF V+ ++ LQ V
Sbjct: 51 -------------------KEPLSGFFFQQRHRYCPDDIKTITYFPVERNR--LQQDVFA 89
Query: 376 FLPEMVGLIASSNGLLCCKSCDDSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAF 555
FLP+ V ++A NGL+CC+SC D IYVCNP+ E+ +++W K ALAF
Sbjct: 90 FLPQDVVVLALCNGLVCCRSC--YPFEDPAIYVCNPLNSEWWKLDW-KEPGKESFIALAF 146
Query: 556 DPFCYPVDELSNFKLA----CVCKETLLTILLQVYSSKTKEWSKLELRVCGDNYNCVPDG 723
+PF L+NFK+ ++ ++Y+S+T+ W KL VC + N +
Sbjct: 147 NPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCD-NSLSKN 204
Query: 724 QVVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGESNDRLHFIV 903
+ +F+ G+L+W+T GD IL F+V E + P+ CIGES +L++++
Sbjct: 205 EGIFSGGILHWLTDGDQILTFNVENELALLISTPLP-AGEFNTRPHACIGESEGQLYYVL 263
Query: 904 ISEAGFQVWLMDS--EPKWVLKHLISLSEMEEGNPHF---LYNDAKRAARLVPDDFVIPT 1068
ISE G VW+++ + W LK+ +L+++E+ + LYN R+ DD
Sbjct: 264 ISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSDIMINLYNRVMLWQRI--DD---RP 318
Query: 1069 WIEPLVYKDGTLLVKLRCNYSYQNEELEVCTKIYLYNFETRTMLELFSIDKLGSQLGFLR 1248
W++PL +KDG L+V+ + IYLY+ +T M E+ K G+
Sbjct: 319 WMDPLAFKDGVLVVR-------------ISNTIYLYHVDTSKMEEVGETSKFGAMSWVSP 365
Query: 1249 -ALPYSMSLAPLG 1284
LPY+MSL PLG
Sbjct: 366 IVLPYTMSLVPLG 378
>gb|ABK92768.1| unknown [Populus trichocarpa]
Length = 384
Score = 179 bits (454), Expect = 2e-42
Identities = 138/433 (31%), Positives = 208/433 (48%), Gaps = 14/433 (3%)
Frame = +1
Query: 28 MEKDTISEVLSRLPAKSLLRFESVSKGWRDLISNNSFRRLQCHXXXXXXXXXXXXXXXXX 207
++ D +VLSRL K LL + VSKGW+DLIS+ SF + Q
Sbjct: 7 LDTDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQK---------------- 50
Query: 208 XXXXXXXXXXXXXLQCHRVKTVTSGFFFQDTW----DVPYPVKYFSVKNDQAILQDTVLD 375
K SGFFFQ D + YF V+ ++ LQ V
Sbjct: 51 -------------------KEPLSGFFFQQRHRYCPDDIKTITYFPVERNR--LQQDVFA 89
Query: 376 FLPEMVGLIASSNGLLCCKSCDDSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAF 555
FLP+ V ++A NGL+CC+SC D IYVCNP+ E+ +++W K ALAF
Sbjct: 90 FLPQDVVVLALCNGLVCCRSC--YPFEDPAIYVCNPLNSEWWKLDW-KEPGKESFIALAF 146
Query: 556 DPFCYPVDELSNFKLA----CVCKETLLTILLQVYSSKTKEWSKLELRVCGDNYNCVPDG 723
+PF L+NFK+ ++ ++Y+S+T+ W KL VC + N +
Sbjct: 147 NPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTRNW-KLSKEVCWCD-NSLSKN 204
Query: 724 QVVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGESNDRLHFIV 903
+ +F+ G+L+W+T GD IL F+V E + P+ CIGES +L++++
Sbjct: 205 EGIFSGGILHWLTDGDQILTFNVENELALLISTPLP-AGEFNTRPHACIGESEGQLYYVL 263
Query: 904 ISEAGFQVWLMDS--EPKWVLKHLISLSEMEEGNPHF---LYNDAKRAARLVPDDFVIPT 1068
ISE G VW+++ + W LK+ +L+++E+ + LYN R+ DD
Sbjct: 264 ISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSDIMINLYNRVMLWQRI--DD---RP 318
Query: 1069 WIEPLVYKDGTLLVKLRCNYSYQNEELEVCTKIYLYNFETRTMLELFSIDKLGSQLGFLR 1248
W++PL +KDG L+V+ + IYLY+ +T M E+ K G+
Sbjct: 319 WMDPLAFKDGVLVVR-------------ISNTIYLYHVDTSKMEEVGETSKFGAMSWVSP 365
Query: 1249 -ALPYSMSLAPLG 1284
LPY+MSL PLG
Sbjct: 366 IVLPYTMSLVPLG 378
>ref|XP_004146726.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
Length = 398
Score = 171 bits (433), Expect = 5e-40
Identities = 133/429 (31%), Positives = 198/429 (46%), Gaps = 14/429 (3%)
Frame = +1
Query: 37 DTISEVLSRLPAKSLLRFESVSKGWRDLISNNSFRRLQCHXXXXXXXXXXXXXXXXXXXX 216
D + +VLSRLP K+LL VSK W LI + SF + Q
Sbjct: 6 DILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQ-------------------- 45
Query: 217 XXXXXXXXXXLQCHRVKTVTSGFFFQDTW-DVPYPVKYFSVK--NDQAILQDTVLDFLPE 387
+ SGF FQ+ + P + F+ + + +Q V FLPE
Sbjct: 46 --------------KCGLALSGFMFQEKYRKCPIDISTFTYMPIDADSKVQKMVFGFLPE 91
Query: 388 MVGLIASSNGLLCCKSC---DDSNARDKLIYVCNPIKKEYVQIEWPKGTVLHQDFALAFD 558
V ++ S NGL+CC+SC S IYVCNP+ K++V E + ALAFD
Sbjct: 92 DVVILQSCNGLVCCRSCFRTQHSTTHSTTIYVCNPLFKKWVSFEVAQLDSF-SSIALAFD 150
Query: 559 PFCYPVDELSNFKLACVCK----ETLLTILLQVYSSKTKEWSKLELRVCGDNYNCVPDGQ 726
P PV+ +NFK+ + + + + ++YSS+T W K VC + N + +
Sbjct: 151 PILDPVNTATNFKVVRIQQLENEQEEMYYTFEIYSSETGTW-KESSEVCYSDGNLL-NNN 208
Query: 727 VVFASGMLYWMTYGDVILAFDVVTEEFCFVGLPVERIYRSQGLCEVCIGESNDRLHFIVI 906
+A G+L+W+T D ILAFD E V P+ + CIGES LHFI+I
Sbjct: 209 GTYAKGVLHWLTDTDQILAFDTEKELSLLVPSPIPALEMFIDAPGTCIGESKGLLHFIMI 268
Query: 907 SEAGFQVWLMDS--EPKWVLKHLISLSEMEEGNPHFLYNDAK-RAARLVPDDFVIPTWIE 1077
E G VW +D E KW LKH L +E+ NP+ + K R +P + +++
Sbjct: 269 CEDGIIVWCLDDYFEAKWTLKHSKQLQMIEDENPNMFFKLYKIMQRRRLPG---MEPYMD 325
Query: 1078 PLVYKDGTLLVKLRCNYSYQNEELEVCTKIYLYNFETRTMLELFSIDKLG-SQLGFLRAL 1254
P +KD LL++ V + +Y Y+ ET ++E+ ++ LG + +
Sbjct: 326 PWAFKDEVLLMR-------------VFSTVYFYHIETGKVVEVCNVASLGPNPFVSPPVI 372
Query: 1255 PYSMSLAPL 1281
PYS+SL PL
Sbjct: 373 PYSLSLIPL 381