BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007341
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   275   2e-71
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   241   3e-61
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   235   1e-59
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali...   216   7e-54
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   214   3e-53

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  275 bits (703), Expect = 2e-71
 Identities = 135/379 (35%), Positives = 220/379 (58%), Gaps = 3/379 (0%)
 Frame = +3

Query: 33   SGLEVNIQKSQIFFAGMDDELCTRVKDIIQFLRGELLVKYLGLPLITTRLSYANCLPLVD 212
            SGL  N  KS IF +G+ +    ++  I+ F  GEL +KYLG+PL+++RL    C  LVD
Sbjct: 19   SGLYPNPNKSDIFLSGVLNAEREQIIHILGFREGELPMKYLGVPLLSSRLKAIYCKGLVD 78

Query: 213  KVEKRIQSWKGKSLSYAGRLQLIKVVLNNMIIYWISSFVLPQSIIEEVQRIFRNFLWTRP 392
            ++  +++ W  ++LSYAGR+QLI  VL ++ +YW S F+LP  +I+ V++I ++FLW+  
Sbjct: 79   RITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGS 138

Query: 393  DCMTSHAFIGWRSLCYPYEE-GLAIRDVETINKAVNLKHIWNIISNKE-TLWVMWARKHI 566
            D  T+ A + W  +C P +E GL I+ ++  NK   LKHIWN+ ++ + ++W  W R ++
Sbjct: 139  DMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNL 198

Query: 567  IKNKNFWEMKTPNDCSYSWRQIMKGRKDAEYIARYQVRDGKSIKLWTDPWHPAGVLKSYY 746
            ++ +NFW +KTP +CS++W +I+K R  A    +Y + DG +  LW D WHP   L   Y
Sbjct: 199  LRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSY 258

Query: 747  SQTFAYNSVANKNAKLEKLMANGEWQISQTLRMHMPDIIQEMEDTVSIH-GGEDQAIWSV 923
             + F Y+S   KNAK+  L+ N EW+   T  +    II+ +    +   G +D+ +W  
Sbjct: 259  GERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLD 318

Query: 924  TVDGSFKLKETYHGIREKELKVTWSHLVWFKHKIPRHSFITWMLLKDGLKTLVKLKKQRV 1103
            + +  F +K  +  +R     V W  +VWFK+ +PRHSF+ WM ++  L T  KL +  +
Sbjct: 319  SPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGI 378

Query: 1104 VDSTTCVMCWHEEDTERHI 1160
                 C +C    +   H+
Sbjct: 379  HGPNRCSLCLRNNEDHNHL 397


>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  241 bits (614), Expect = 3e-61
 Identities = 131/386 (33%), Positives = 207/386 (53%), Gaps = 10/386 (2%)
 Frame = +3

Query: 33   SGLEVNIQKSQIFFAGMDDELCTRVKDIIQFLRGELLVKYLGLPLITTRLSYANCLPLVD 212
            S L+++++KS IF AG+     T +     F  G L VKYLGLPL+T R++ ++ LPLV+
Sbjct: 879  SWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVE 938

Query: 213  KVEKRIQSWKGKSLSYAGRLQLIKVVLNNMIIYWISSFVLPQSIIEEVQRIFRNFLWTRP 392
            K+  RI SW  + LS+AGRLQLIK VL+++  +W+S F LP++ ++E++++F  FLW+ P
Sbjct: 939  KIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGP 998

Query: 393  DCMTSHAFIGWRSLCYPYEE-GLAIRDVETINKAVNLKHIWNIISNKETLWVMWARKHII 569
            D  T  A I W  +C   EE GL ++ ++  N+   LK IW I+S +++LWV W  KH+I
Sbjct: 999  DLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLI 1058

Query: 570  KNKNFWEMKTPNDC-SYSWRQIMKGRKDAEYIARYQVRDGKSIKLWTDPWHPAGVLKSYY 746
            + + FW +K      S+ WR+I+K R  A    R +VR G     W D W P G L  + 
Sbjct: 1059 RKETFWSVKENTGLGSWLWRKILKQRDKARLFHRMEVRSGTFTSFWHDHWCPLGRLHQHM 1118

Query: 747  SQTFAYNSVANKNAKLEKLMANGEWQISQTLRMHMPDIIQEMEDTVSIHGGE-----DQA 911
                  +     NA + ++M       +   + H  D + +++  + +   +     D++
Sbjct: 1119 GSRGTIDLGIPNNATVAEVMN------THRRKRHRADFLNQIKSQIELARQDRSTDGDRS 1172

Query: 912  IWSV---TVDGSFKLKETYHGIREKELKVTWSHLVWFKHKIPRHSFITWMLLKDGLKTLV 1082
            +W     T   SF   +T+  IR   L+  W   VWF    P++SF+TW+   + L T  
Sbjct: 1173 LWKQKEDTFKSSFSSSKTWQQIRSISLRCDWYRGVWFSASTPKYSFVTWLAFHNRLTTSD 1232

Query: 1083 KLKKQRVVDSTTCVMCWHEEDTERHI 1160
            K+ K        CV C  E +T  H+
Sbjct: 1233 KICKWNSGARYDCVFCGEELETRDHL 1258


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  235 bits (600), Expect = 1e-59
 Identities = 124/386 (32%), Positives = 209/386 (54%), Gaps = 10/386 (2%)
 Frame = +3

Query: 33   SGLEVNIQKSQIFFAGMDDELCTRVKDIIQFLRGELLVKYLGLPLITTRLSYANCLPLVD 212
            SGL ++++KS ++ AG+       V D   F  G+L V+YLGLPLIT RLS  +CLPL++
Sbjct: 732  SGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLE 791

Query: 213  KVEKRIQSWKGKSLSYAGRLQLIKVVLNNMIIYWISSFVLPQSIIEEVQRIFRNFLWTRP 392
            +V KRI SW  + LSYAGRL LI  VL ++  +W+++F LP+  I E++++   FLW+  
Sbjct: 792  QVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGT 851

Query: 393  DCMTSHAFIGWRSLCYPYEE-GLAIRDVETINKAVNLKHIWNIISNKETLWVMWARKHII 569
            +  ++ A I W  +C P +E GL +R ++  N    LK +W I+S+  +LWV W  +H++
Sbjct: 852  EMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLL 911

Query: 570  KNKNFWEMK-TPNDCSYSWRQIMKGRKDAEYIARYQVRDGKSIKLWTDPWHPAGVLKSYY 746
            +N +FWE+K T +  S+ W++++K R+ A+ +++ +V +GK    W D W   G L    
Sbjct: 912  RNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNWSDLGQLLERT 971

Query: 747  SQTFAYNSVANKNAKLEKLMANGEWQISQTLRMHMPDIIQEMEDTVSIHGG-----EDQA 911
                  +   ++   +E+   N      +  R H  D+   +ED +          ED+ 
Sbjct: 972  GDRGLIDLGISRRMTVEEAWTN------RRQRRHRNDVYNVIEDALKKSWDTRTETEDKV 1025

Query: 912  IWSVTVD---GSFKLKETYHGIREKELKVTWSHLVWFKHKIPRHSFITWMLLKDGLKTLV 1082
            +W    D    +F  ++T+H  R    +V W  ++WF H  P++SF +W+     L T  
Sbjct: 1026 LWRGKSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGD 1085

Query: 1083 KLKKQRVVDSTTCVMCWHEEDTERHI 1160
            ++       +T C+ C    +T  H+
Sbjct: 1086 RMINWANGIATDCIFCQGTLETRDHL 1111


>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
          Length = 504

 Score =  216 bits (551), Expect = 7e-54
 Identities = 120/388 (30%), Positives = 202/388 (52%), Gaps = 10/388 (2%)
 Frame = +3

Query: 27   RCSGLEVNIQKSQIFFAGMDDELCTRVKDIIQFLRGELLVKYLGLPLITTRLSYANCLPL 206
            +CS L+++++KS ++ AG+       V D   F  G L V+YLGLPL+T + S  + LPL
Sbjct: 60   KCSDLKISMEKSTVYLAGLSHTTRQEVIDRFSFAVGTLPVRYLGLPLVTKQFSSTDYLPL 119

Query: 207  VDKVEKRIQSWKGKSLSYAGRLQLIKVVLNNMIIYWISSFVLPQSIIEEVQRIFRNFLWT 386
            +D ++++I SW  + LSY GRL LI  +L ++  +W+ +F LP+  I E+ ++   +LW+
Sbjct: 120  IDHIKQKICSWSARFLSYTGRLNLISSILWSICNFWMGAFRLPRDCIREIDKMCSAYLWS 179

Query: 387  RPDCMTSHAFIGWRSLCYPYEE-GLAIRDVETINKAVNLKHIWNIISNKETLWVMWARKH 563
              +  TS A I W  +C P EE GL +R ++  N    LK IW IIS+ ++LWV W +  
Sbjct: 180  GGELNTSKAKIAWAFVCKPKEEGGLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSS 239

Query: 564  IIKNKNFWEMKTPNDC-SYSWRQIMKGRKDAEYIARYQVRDGKSIKLWTDPWHPAGVLKS 740
            ++K   FW ++      S+ WR+I+K R  A  + + ++ +G     W D W   G L  
Sbjct: 240  LLKKVFFWAVRENTSLGSWMWRKILKFRDIARTLCKVEINNGAQTSFWYDDWSDLGRLIE 299

Query: 741  YYSQTFAYNSVANKNAKLEKLMANGEWQISQTLRMHMPDIIQEMEDTV-----SIHGGED 905
                  A +   NK+A + +   N      +  R H  + +  +E+ +     S +  ED
Sbjct: 300  SAGDRGAIDLGINKHATVVEAWGN------RRRRRHRANFLNRVEERLVLSWNSRNQAED 353

Query: 906  QAIWSVTVD---GSFKLKETYHGIREKELKVTWSHLVWFKHKIPRHSFITWMLLKDGLKT 1076
             A+W    +     F  K+T++ IR    KV W   VWF   IP+H+F  W+ + + L T
Sbjct: 354  CALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQAIPKHAFCMWLAVHNRLST 413

Query: 1077 LVKLKKQRVVDSTTCVMCWHEEDTERHI 1160
              ++    +    TC++C +  ++  H+
Sbjct: 414  GDRMTLWNMGVDATCILCNNALESRDHL 441


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  214 bits (546), Expect = 3e-53
 Identities = 116/382 (30%), Positives = 203/382 (53%), Gaps = 6/382 (1%)
 Frame = +3

Query: 33   SGLEVNIQKSQIFFAGMDDELCTRVKDIIQFLRGELLVKYLGLPLITTRLSYANCLPLVD 212
            SGL++N++K+ ++ AG+ D     +     F  G+L V+YLGLPL+T RL+  +  PL +
Sbjct: 137  SGLQINMEKTTLYTAGVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFE 196

Query: 213  KVEKRIQSWKGKSLSYAGRLQLIKVVLNNMIIYWISSFVLPQSIIEEVQRIFRNFLWTRP 392
            ++  RI +W  + LS+AGRL LI  VL + + +W+S+F LP + ++E+  I   FLW+ P
Sbjct: 197  QIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGP 256

Query: 393  DCMTSHAFIGWRSLCYPYEE-GLAIRDVETINKAVNLKHIWNIISNKETLWVMWARKHII 569
            +     A + W  +C P +E GL +R +   N    LK IW + SN ++LWV W++ +++
Sbjct: 257  ELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLL 316

Query: 570  KNKNFWEMKTPNDC--SYSWRQIMKGRKDAEYIARYQVRDGKSIKLWTDPWHPAGVLKSY 743
            K ++FW + TPN    S+ W++++K R+ A+  +R +V +G     W D W   G L   
Sbjct: 317  KQESFWSL-TPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSGMGHLMDV 375

Query: 744  YSQTFAYNSVANKNAKLEKLMANGEWQISQTLRMHMPDIIQEMEDTVSIHGGEDQAIWSV 923
              Q    +   ++N  + +  +N   +  +T +++  +     +        ED  +W  
Sbjct: 376  TGQRGQIDLGISRNKTVAEAWSNRRRRKHRTEQLNDIEAALNQKYQTRNLLREDATLWRG 435

Query: 924  TVD---GSFKLKETYHGIREKELKVTWSHLVWFKHKIPRHSFITWMLLKDGLKTLVKLKK 1094
              D    SF  K+T++ +R+K  +V W   VWF H  P++ F TW+ L++ L T  +++ 
Sbjct: 436  KGDVFKTSFSTKDTWNQVRKKSNEVAWYKGVWFSHSTPKYQFCTWLALRNRLSTGYRMQL 495

Query: 1095 QRVVDSTTCVMCWHEEDTERHI 1160
                    C  C    +T  H+
Sbjct: 496  WNNGSDVKCTFCSTSIETRDHL 517