BLASTX nr result

ID: Coptis24_contig00007275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007275
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266803.1| PREDICTED: transcription factor VIP1-like [V...    75   7e-12
gb|AFO63283.1| bZIP4 [Tamarix hispida]                                 65   6e-09
gb|ABK96202.1| unknown [Populus trichocarpa]                           62   5e-08
ref|XP_002535507.1| transcription factor, putative [Ricinus comm...    61   1e-07
ref|XP_002307491.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002266803.1| PREDICTED: transcription factor VIP1-like [Vitis vinifera]
          Length = 350

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/78 (51%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = -3

Query: 246 SNINNCIDIDGMPDTPKRGSHHRRAQSETFFRFPDDIIFDTDVDFNLS-SMDIIPSMSEE 70
           S   N  DID MPD P RG+HHRRAQSETFFRF DDI+ D D D ++  ++DII   +  
Sbjct: 13  SPFGNRADIDHMPDAPYRGAHHRRAQSETFFRFSDDILLDADADVDVDFNLDIISDNTNS 72

Query: 69  NVI-MTNVDDSGKSEESN 19
               +    DS KSE+SN
Sbjct: 73  GAAGVPMAVDSSKSEDSN 90


>gb|AFO63283.1| bZIP4 [Tamarix hispida]
          Length = 347

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/75 (46%), Positives = 51/75 (68%), Gaps = 7/75 (9%)
 Frame = -3

Query: 222 IDGMPDTPKRGSHHRRAQSETFFRFPDDIIFDTDVDFNLSSMDII-------PSMSEENV 64
           ID +P+TP+R +HHRRA S+T FRFPDD++FD   D +LSS+D++       P  +E N 
Sbjct: 20  IDQIPETPQRAAHHRRAHSDTSFRFPDDLLFDVS-DVDLSSLDLLTTNHINSPPPTECNH 78

Query: 63  IMTNVDDSGKSEESN 19
           +   + DS KS+ES+
Sbjct: 79  VPMTL-DSSKSDESS 92


>gb|ABK96202.1| unknown [Populus trichocarpa]
          Length = 340

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/49 (59%), Positives = 39/49 (79%)
 Frame = -3

Query: 228 IDIDGMPDTPKRGSHHRRAQSETFFRFPDDIIFDTDVDFNLSSMDIIPS 82
           +DI+ MP+TP RGSHHRRA S+T FRF DD++F    DF+LSS+D +P+
Sbjct: 14  VDIEQMPETPYRGSHHRRAHSDTSFRF-DDLLFLDASDFDLSSLDDLPT 61


>ref|XP_002535507.1| transcription factor, putative [Ricinus communis]
           gi|223522845|gb|EEF26876.1| transcription factor,
           putative [Ricinus communis]
          Length = 283

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/50 (56%), Positives = 38/50 (76%)
 Frame = -3

Query: 240 INNCIDIDGMPDTPKRGSHHRRAQSETFFRFPDDIIFDTDVDFNLSSMDI 91
           I   +DI+ MPDTP+RGSHHRRA S+T FRF D ++FD   D +LS++D+
Sbjct: 8   IGKMMDIEQMPDTPQRGSHHRRAHSDTSFRFDDLLLFDPS-DLDLSALDL 56


>ref|XP_002307491.1| predicted protein [Populus trichocarpa] gi|222856940|gb|EEE94487.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 27/49 (55%), Positives = 37/49 (75%)
 Frame = -3

Query: 228 IDIDGMPDTPKRGSHHRRAQSETFFRFPDDIIFDTDVDFNLSSMDIIPS 82
           +DI+ MP+TP RG+HHRRA S+T FRF D +IFD   DF+L  +D +P+
Sbjct: 3   VDIEQMPETPHRGNHHRRAHSDTSFRFDDLLIFDAS-DFDLPPLDDLPT 50


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