BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007272
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304977.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002456459.1| hypothetical protein SORBIDRAFT_03g036700 [S...    63   3e-08
ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containi...    61   1e-07
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...    59   4e-07

>ref|XP_002304977.1| predicted protein [Populus trichocarpa] gi|222847941|gb|EEE85488.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/66 (45%), Positives = 43/66 (65%)
 Frame = -1

Query: 203 NLFTYNVLIKWYGNNGNLDEAKSVYDNMLKSDIVPDWFTFEALIPCVCGKGEFGLALKLC 24
           ++F+YN LI+ + N G+L+EAK  Y  + KSDI PD  TF+ LIP V  KG+   A  LC
Sbjct: 269 DIFSYNALIRGFVNEGDLEEAKGWYGEIRKSDIKPDKLTFKTLIPFVVEKGDVAFAFDLC 328

Query: 23  EKSIGS 6
           + ++ S
Sbjct: 329 KDALSS 334


>ref|XP_002456459.1| hypothetical protein SORBIDRAFT_03g036700 [Sorghum bicolor]
           gi|241928434|gb|EES01579.1| hypothetical protein
           SORBIDRAFT_03g036700 [Sorghum bicolor]
          Length = 429

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/63 (46%), Positives = 40/63 (63%)
 Frame = -1

Query: 206 PNLFTYNVLIKWYGNNGNLDEAKSVYDNMLKSDIVPDWFTFEALIPCVCGKGEFGLALKL 27
           P+  +YN LI+ Y   G LDE+K VYD ++K+   P+  TFE LIPC+   GE  LAL  
Sbjct: 284 PDSVSYNELIRGYCKEGRLDESKKVYDELVKNGYAPNKGTFETLIPCLVEVGELDLALNC 343

Query: 26  CEK 18
           C++
Sbjct: 344 CQE 346


>ref|XP_003529283.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
           mitochondrial-like [Glycine max]
          Length = 379

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/63 (41%), Positives = 42/63 (66%)
 Frame = -1

Query: 206 PNLFTYNVLIKWYGNNGNLDEAKSVYDNMLKSDIVPDWFTFEALIPCVCGKGEFGLALKL 27
           P+LF  N +IK + N GNLDEAK  +  + KS+  PD  T+  ++P +C KG+F  A+++
Sbjct: 265 PDLFCINAVIKGFVNEGNLDEAKKWFGEIAKSEYDPDKNTYSIIVPFLCEKGDFKTAIEM 324

Query: 26  CEK 18
           C++
Sbjct: 325 CKE 327


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/63 (41%), Positives = 41/63 (65%)
 Frame = -1

Query: 206 PNLFTYNVLIKWYGNNGNLDEAKSVYDNMLKSDIVPDWFTFEALIPCVCGKGEFGLALKL 27
           P+ +++N LIK + N+G +DEA + Y  M ++D +PD  TF  L+P  C KG F  A +L
Sbjct: 268 PDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCLPDKLTFATLVPLYCEKGSFDQAFEL 327

Query: 26  CEK 18
           C++
Sbjct: 328 CKE 330


>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/63 (41%), Positives = 40/63 (63%)
 Frame = -1

Query: 206 PNLFTYNVLIKWYGNNGNLDEAKSVYDNMLKSDIVPDWFTFEALIPCVCGKGEFGLALKL 27
           P+ +++N LIK + N+G +DEA + Y  M ++D  PD  TF  L+P  C KG F  A +L
Sbjct: 269 PDGYSFNALIKGFCNDGKVDEATNWYGKMRENDCSPDKLTFATLVPLYCEKGSFDQAFEL 328

Query: 26  CEK 18
           C++
Sbjct: 329 CKE 331