BLASTX nr result

ID: Coptis24_contig00007162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007162
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas...    96   3e-18
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu...    88   6e-16
ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloproteas...    87   2e-15
ref|XP_004149014.1| PREDICTED: uncharacterized protein LOC101214...    87   2e-15

>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
            gi|296090151|emb|CBI39970.3| unnamed protein product
            [Vitis vinifera]
          Length = 907

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/75 (64%), Positives = 59/75 (78%)
 Frame = -3

Query: 333  LLRRHHVALLKTIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESPGSLPFFEMERE 154
            LLRRHH ALLKT+KVL+++KEISGE+I++IL+ YP +TPV  LLEEE+PGSLPF   E  
Sbjct: 833  LLRRHHAALLKTVKVLVEQKEISGEEIDFILNSYPPQTPVSCLLEEENPGSLPFGRQEHG 892

Query: 153  RDFELSLLTESKGDL 109
               E +LLT SKG L
Sbjct: 893  LKLEDALLTPSKGFL 907


>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
            predicted protein [Populus trichocarpa]
          Length = 932

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/73 (60%), Positives = 59/73 (80%)
 Frame = -3

Query: 333  LLRRHHVALLKTIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESPGSLPFFEMERE 154
            LL+RHH ALLK +KVLL++KEISGE+I+YIL+ YP +T +  LLEEE+PG LPFF+ E E
Sbjct: 857  LLKRHHAALLKAVKVLLNQKEISGEEIDYILNNYPPQTRLSLLLEEENPGILPFFKQELE 916

Query: 153  RDFELSLLTESKG 115
             + + +LLT S+G
Sbjct: 917  NELDYALLTTSEG 929


>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
            gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
            putative [Ricinus communis]
          Length = 925

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/73 (56%), Positives = 57/73 (78%)
 Frame = -3

Query: 333  LLRRHHVALLKTIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESPGSLPFFEMERE 154
            LLRRHH ALLK +KVL+++KEISG +I+YIL+ YP +T +  LLEEE+PGSLPF + E+ 
Sbjct: 853  LLRRHHAALLKAVKVLINQKEISGNEIDYILNNYPPQTCISLLLEEENPGSLPFTKNEQG 912

Query: 153  RDFELSLLTESKG 115
             + +  LLT ++G
Sbjct: 913  HEVDYELLTSAEG 925


>ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis
            sativus]
          Length = 962

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/79 (51%), Positives = 58/79 (73%), Gaps = 8/79 (10%)
 Frame = -3

Query: 333  LLRRHHVALLKTIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESPGSLPFF----- 169
            +L+RHH ALLK +KVL+ ++EISGE+I++ILD YP +TP+  +L+EE+PGSLPF      
Sbjct: 879  MLQRHHAALLKAVKVLITQEEISGEEIDFILDNYPQQTPISVVLQEENPGSLPFVKRKRE 938

Query: 168  ---EMERERDFELSLLTES 121
               E E+ERDFE   + +S
Sbjct: 939  NEQEREQERDFEYGAIPQS 957


>ref|XP_004149014.1| PREDICTED: uncharacterized protein LOC101214425 [Cucumis sativus]
          Length = 547

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/79 (51%), Positives = 58/79 (73%), Gaps = 8/79 (10%)
 Frame = -3

Query: 333 LLRRHHVALLKTIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESPGSLPFF----- 169
           +L+RHH ALLK +KVL+ ++EISGE+I++ILD YP +TP+  +L+EE+PGSLPF      
Sbjct: 464 MLQRHHAALLKAVKVLITQEEISGEEIDFILDNYPQQTPISVVLQEENPGSLPFVKRKRE 523

Query: 168 ---EMERERDFELSLLTES 121
              E E+ERDFE   + +S
Sbjct: 524 NEQEREQERDFEYGAIPQS 542


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