BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007112
         (1541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing sub...   603   e-170
ref|XP_002519683.1| Katanin p60 ATPase-containing subunit, putat...   595   e-168
ref|XP_003531097.1| PREDICTED: katanin p60 ATPase-containing sub...   592   e-167
ref|XP_003524802.1| PREDICTED: katanin p60 ATPase-containing sub...   589   e-166
ref|XP_002305703.1| predicted protein [Populus trichocarpa] gi|2...   589   e-166

>ref|XP_002276286.2| PREDICTED: katanin p60 ATPase-containing subunit A-like 2 [Vitis
            vinifera]
          Length = 406

 Score =  603 bits (1555), Expect = e-170
 Identities = 311/404 (76%), Positives = 335/404 (82%), Gaps = 24/404 (5%)
 Frame = +2

Query: 116  DEPMPTRWSFQDFKMFYDAKFGRKKEAEQKE----------NVLVSNVHTNGTNVVN--- 256
            DEP  TRWSFQDFKMFYD KFGRKKE E+ +          N   SN   NG   V    
Sbjct: 3    DEPFLTRWSFQDFKMFYDVKFGRKKEPEKHDAAESSGKPVSNGNSSNGTANGGGHVKNTS 62

Query: 257  -----EEFRNQ------ANGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPD 403
                 E++R Q       NG+ S+  + KPQKSLLP F+SA+ RALGESL RDIIRG+PD
Sbjct: 63   DLAIYEQYRTQERGSANGNGVLSDRYDEKPQKSLLPSFESADMRALGESLSRDIIRGSPD 122

Query: 404  VKWENIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATE 583
            VKW++IKGLE AKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATE
Sbjct: 123  VKWDSIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATE 182

Query: 584  CNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHE 763
            C TTFFNISASS+VSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDA+ISQRGEGRSEHE
Sbjct: 183  CKTTFFNISASSVVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDALISQRGEGRSEHE 242

Query: 764  ASRRLKTELLVQMDGLTKTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAM 943
            ASRRLKTELLVQMDGLTKT++LVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAM
Sbjct: 243  ASRRLKTELLVQMDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAM 302

Query: 944  FEELLPSIPGEEKLPYELLVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXX 1123
            FEELLPS+PGEEKLPY+L+VERTEGYSGSDIRL+CKEAAMQPLRR+M             
Sbjct: 303  FEELLPSVPGEEKLPYDLMVERTEGYSGSDIRLLCKEAAMQPLRRLMAHLEDKAEVVPEE 362

Query: 1124 XXXKVGPIKHEDIETALRNTRPSAHLHAHRYDKFNADYGSHIVQ 1255
               KVGPIKH+DIETAL+NTRPSAHLH HRYDKFN DYGS I+Q
Sbjct: 363  ELPKVGPIKHDDIETALKNTRPSAHLHVHRYDKFNTDYGSQILQ 406


>ref|XP_002519683.1| Katanin p60 ATPase-containing subunit, putative [Ricinus communis]
            gi|223541100|gb|EEF42656.1| Katanin p60 ATPase-containing
            subunit, putative [Ricinus communis]
          Length = 408

 Score =  595 bits (1535), Expect = e-168
 Identities = 305/406 (75%), Positives = 332/406 (81%), Gaps = 26/406 (6%)
 Frame = +2

Query: 116  DEPMPTRWSFQDFKMFYDAKFGRKKEAEQKENVL------------VSNVHTNGTNVVN- 256
            DEP  TRWSFQDFK+FYDAKFGRKK +E +  V              SN  +NG   V  
Sbjct: 3    DEPSVTRWSFQDFKLFYDAKFGRKKMSETQNGVAGPAVANGIGNSSTSNATSNGNGHVKN 62

Query: 257  -------EEFRNQ------ANGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGN 397
                   E++RNQ      +NG+     + +PQKSLLP FDSAETRAL E LCRDI+RGN
Sbjct: 63   TSDMAIYEQYRNQDRSSNHSNGVLPNGIDDRPQKSLLPAFDSAETRALAEGLCRDIVRGN 122

Query: 398  PDVKWENIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVA 577
            PDVKWE+IKGLE AKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVA
Sbjct: 123  PDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVA 182

Query: 578  TECNTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSE 757
            TEC TTFFNISASS+VSKWRGDSEKL+KVLFELARHHAPSTIF+DEIDAIISQRGEGRSE
Sbjct: 183  TECKTTFFNISASSVVSKWRGDSEKLIKVLFELARHHAPSTIFIDEIDAIISQRGEGRSE 242

Query: 758  HEASRRLKTELLVQMDGLTKTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARR 937
            HEASRRLKTELL+QMDGLT+T +LVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARR
Sbjct: 243  HEASRRLKTELLIQMDGLTRTEELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARR 302

Query: 938  AMFEELLPSIPGEEKLPYELLVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXX 1117
            AM+EELLP  P E+KLPY+LLVERTEG+SGSDIRL+CKEAAMQPLRR+M           
Sbjct: 303  AMYEELLPPQPDEDKLPYDLLVERTEGFSGSDIRLLCKEAAMQPLRRLMALLEDRQEVVP 362

Query: 1118 XXXXXKVGPIKHEDIETALRNTRPSAHLHAHRYDKFNADYGSHIVQ 1255
                 KVGPI  EDIETAL+NTRPSAHLHAHRY+KFNADYGS I+Q
Sbjct: 363  DDELPKVGPITPEDIETALKNTRPSAHLHAHRYEKFNADYGSQILQ 408


>ref|XP_003531097.1| PREDICTED: katanin p60 ATPase-containing subunit A-like 2-like
            [Glycine max]
          Length = 405

 Score =  592 bits (1527), Expect = e-167
 Identities = 305/403 (75%), Positives = 332/403 (82%), Gaps = 23/403 (5%)
 Frame = +2

Query: 116  DEPMPTRWSFQDFKMFYDAKFGRKKEAEQKENVL---VSNVHTNGTNV------------ 250
            D+PMPTRWSFQDFK+ YDAKFGRKK AE  ++     VSN + N   V            
Sbjct: 3    DDPMPTRWSFQDFKLCYDAKFGRKKVAENGDDAAGKAVSNGNGNSVTVAIVSNGNKRASE 62

Query: 251  --VNEEFRNQA------NGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPDV 406
              V E+FR++       NG     T+ +PQKSLLPPF+SAE RAL ESL RDIIRG+PDV
Sbjct: 63   MAVYEQFRSEGQNQIHTNGFVPTLTDERPQKSLLPPFESAEMRALAESLSRDIIRGSPDV 122

Query: 407  KWENIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC 586
            KWE+IKGLE AKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC
Sbjct: 123  KWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC 182

Query: 587  NTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEA 766
            NTTFFNISASS+VSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGE RSEHEA
Sbjct: 183  NTTFFNISASSVVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEA 242

Query: 767  SRRLKTELLVQMDGLTKTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMF 946
            SRRLKTELL+QMDGLTKT++LVFVLAATNLPWELDAAMLRRLEKRILVPLPEP ARRAMF
Sbjct: 243  SRRLKTELLIQMDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARRAMF 302

Query: 947  EELLPSIPGEEKLPYELLVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXXX 1126
            EELLP  PGEE +PY++L ++TEGYSGSDIRL+CKE AMQPLRR+M              
Sbjct: 303  EELLPQQPGEESIPYDILEDKTEGYSGSDIRLLCKETAMQPLRRLMSQLEQNQDVVPEEE 362

Query: 1127 XXKVGPIKHEDIETALRNTRPSAHLHAHRYDKFNADYGSHIVQ 1255
              KVGPI+ EDIETALRNTRPSAHLHAH+YDKFNADYGS I+Q
Sbjct: 363  LPKVGPIRSEDIETALRNTRPSAHLHAHKYDKFNADYGSQILQ 405


>ref|XP_003524802.1| PREDICTED: katanin p60 ATPase-containing subunit A-like 2-like
            [Glycine max]
          Length = 403

 Score =  589 bits (1519), Expect = e-166
 Identities = 302/401 (75%), Positives = 329/401 (82%), Gaps = 21/401 (5%)
 Frame = +2

Query: 116  DEPMPTRWSFQDFKMFYDAKFGRKKEAEQKE----------NVLVSNVHTNGTN-----V 250
            D+PMPTRWSFQDFK++YDAKFGRKK AE  +          N +   + +NG        
Sbjct: 3    DDPMPTRWSFQDFKLYYDAKFGRKKVAENGDTATDKAVSNGNSVTVTIVSNGNKRASEMA 62

Query: 251  VNEEFRNQA------NGISSETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPDVKW 412
            V E+FR +       NG      + +PQKSLLPPF+SAE RAL ESL RDIIRG+PDVKW
Sbjct: 63   VYEQFRGEGLNQIHTNGFVPTIVDERPQKSLLPPFESAEMRALAESLSRDIIRGSPDVKW 122

Query: 413  ENIKGLETAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNT 592
            E+IKGLE AKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC T
Sbjct: 123  ESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKT 182

Query: 593  TFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEASR 772
            TFFNISASS+VSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGE RSEHEASR
Sbjct: 183  TFFNISASSVVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASR 242

Query: 773  RLKTELLVQMDGLTKTNDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEE 952
            RLKTELL+QMDGLTKT++LVFVLAATNLPWELDAAMLRRLEKRILVPLPEP ARRAMFEE
Sbjct: 243  RLKTELLIQMDGLTKTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARRAMFEE 302

Query: 953  LLPSIPGEEKLPYELLVERTEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXXXXX 1132
            LLP  P EE +PY++LV++TEGYSGSDIRL+CKE AMQPLRR+M                
Sbjct: 303  LLPQQPDEEPIPYDILVDKTEGYSGSDIRLLCKETAMQPLRRLMSQLEQSQDVVPEEELP 362

Query: 1133 KVGPIKHEDIETALRNTRPSAHLHAHRYDKFNADYGSHIVQ 1255
            KVGPIK EDIETALRNTRPSAHLHAH+YDKFNADYGS I+Q
Sbjct: 363  KVGPIKSEDIETALRNTRPSAHLHAHKYDKFNADYGSQILQ 403


>ref|XP_002305703.1| predicted protein [Populus trichocarpa] gi|222848667|gb|EEE86214.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  589 bits (1519), Expect = e-166
 Identities = 303/382 (79%), Positives = 321/382 (84%), Gaps = 2/382 (0%)
 Frame = +2

Query: 116  DEPMPTRWSFQDFKMFYDAKFGRKKEAEQK--ENVLVSNVHTNGTNVVNEEFRNQANGIS 289
            DEP  TRWSFQDFK FYD KFGRKK A     E    S+   NG   V     N     S
Sbjct: 3    DEPSVTRWSFQDFKTFYDGKFGRKKAAAAAAAEAEAASDSQQNGQTTVVASNGNGHVNNS 62

Query: 290  SETTNGKPQKSLLPPFDSAETRALGESLCRDIIRGNPDVKWENIKGLETAKRLLKEAVVM 469
            S+    + +KSLLP FDSAETRAL ESLCRDIIRG+PDVKWE+IKGLE AKRLLKEAVVM
Sbjct: 63   SDMAIYEQKKSLLPAFDSAETRALAESLCRDIIRGSPDVKWESIKGLENAKRLLKEAVVM 122

Query: 470  PIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISASSIVSKWRGDSE 649
            PIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATEC TTFFNISASS+VSKWRGDSE
Sbjct: 123  PIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSE 182

Query: 650  KLVKVLFELARHHAPSTIFLDEIDAIISQRGEGRSEHEASRRLKTELLVQMDGLTKTNDL 829
            KL+KVLFELARHHAPSTIFLDEIDAIISQRGE RSEHEASRRLKTELL+QMDGLT+TN+L
Sbjct: 183  KLIKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTNEL 242

Query: 830  VFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRAMFEELLPSIPGEEKLPYELLVER 1009
            VFVLAATNLPWELDAAMLRRLEKRILVPLPEPEAR AMFEELLPS P EEKLPY+LLVER
Sbjct: 243  VFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARAAMFEELLPSQPDEEKLPYDLLVER 302

Query: 1010 TEGYSGSDIRLVCKEAAMQPLRRVMXXXXXXXXXXXXXXXXKVGPIKHEDIETALRNTRP 1189
            TEG+SGSDIRL+CKEAAMQPLRR+M                KVGPI+ EDIETAL+NTRP
Sbjct: 303  TEGFSGSDIRLLCKEAAMQPLRRIMTLLEDTEEVVPEDELPKVGPIRPEDIETALKNTRP 362

Query: 1190 SAHLHAHRYDKFNADYGSHIVQ 1255
            SAHLHAHRYDKFNADYGS I+Q
Sbjct: 363  SAHLHAHRYDKFNADYGSQILQ 384