BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007104
         (1223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279098.1| PREDICTED: F-box protein At5g39250 isoform 3...   371   e-100
ref|XP_002526106.1| conserved hypothetical protein [Ricinus comm...   360   5e-97
emb|CAN69611.1| hypothetical protein VITISV_043871 [Vitis vinifera]   355   2e-95
gb|ABB29946.1| F-box family protein-like [Solanum tuberosum]          354   2e-95
ref|XP_002324105.1| predicted protein [Populus trichocarpa] gi|2...   348   2e-93

>ref|XP_002279098.1| PREDICTED: F-box protein At5g39250 isoform 3 [Vitis vinifera]
            gi|225451701|ref|XP_002279074.1| PREDICTED: F-box protein
            At5g39250 isoform 2 [Vitis vinifera]
            gi|225451703|ref|XP_002279063.1| PREDICTED: F-box protein
            At5g39250 isoform 1 [Vitis vinifera]
            gi|296082222|emb|CBI21227.3| unnamed protein product
            [Vitis vinifera]
          Length = 249

 Score =  371 bits (953), Expect = e-100
 Identities = 173/256 (67%), Positives = 207/256 (80%)
 Frame = -1

Query: 1139 MAYAEILKAVFPFLEGNDLASCMQVCKLWRDIASDDYFWKCICTKRWPSIGKKPSDSSMT 960
            MAY E+LKAVFP LEG DLASCM VCK WRDIA DDYFWKC+C KRWPSI K+PS  ++T
Sbjct: 1    MAYEEVLKAVFPLLEGADLASCMLVCKQWRDIAQDDYFWKCVCAKRWPSICKRPSPPTVT 60

Query: 959  YHKFFLTFSKRHKRRTLLPPQLSFDDLDFYIDIWAGESLIFSEAIPGPILQGGIKIHPSG 780
            Y+K   TF KR   R L PP+LSF+DL+FYIDIW GE  IFSE +PGP+LQ GI + P G
Sbjct: 61   YYKLCQTFYKRQHCRALPPPRLSFNDLEFYIDIWTGERSIFSEVVPGPVLQTGIVVPPPG 120

Query: 779  TSDILRCHLEGPDYKMTVLVEPKFTLCSNENVSVSVLVGRKDTNKIACIVHRSFFSYMDR 600
              D+LR HLEGP+YKMT+LVEP+FT+     VSVSVLVGRKD+ K+ACI+++S F Y+DR
Sbjct: 121  ICDMLRFHLEGPEYKMTLLVEPRFTVPLMATVSVSVLVGRKDSKKVACIINKSMFDYIDR 180

Query: 599  TAYRALAYDYLDFSPVHPFVAGIRAWISLLFLDGVSDGVKPGSDGLINVFGIAMDFCDVA 420
            TAYRALA+DYLDFSP++PF++GIRAWISLLF++        G++G+INVFG+ MDFCD A
Sbjct: 181  TAYRALAFDYLDFSPIYPFISGIRAWISLLFME-------DGNEGVINVFGLEMDFCDAA 233

Query: 419  NSEEEVLWLLDMLDWK 372
            NSE EVLWLLDMLDWK
Sbjct: 234  NSEPEVLWLLDMLDWK 249


>ref|XP_002526106.1| conserved hypothetical protein [Ricinus communis]
            gi|223534603|gb|EEF36300.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 249

 Score =  360 bits (923), Expect = 5e-97
 Identities = 169/256 (66%), Positives = 206/256 (80%)
 Frame = -1

Query: 1139 MAYAEILKAVFPFLEGNDLASCMQVCKLWRDIASDDYFWKCICTKRWPSIGKKPSDSSMT 960
            M+Y E+LKAVFP L+G DLASCM V K WRD A DDYFWKC+C KRWPSI K+P+  ++T
Sbjct: 1    MSYDEVLKAVFPLLDGVDLASCMVVSKQWRDTARDDYFWKCLCAKRWPSICKRPNPPTVT 60

Query: 959  YHKFFLTFSKRHKRRTLLPPQLSFDDLDFYIDIWAGESLIFSEAIPGPILQGGIKIHPSG 780
            Y K + TF KR  R+TLLPP+LSFDDL+F+IDIW+ E LIFSE +PGP+L GGIK+ P G
Sbjct: 61   YCKLYQTFYKRQNRQTLLPPRLSFDDLEFFIDIWSEEKLIFSEVVPGPVLLGGIKVPPPG 120

Query: 779  TSDILRCHLEGPDYKMTVLVEPKFTLCSNENVSVSVLVGRKDTNKIACIVHRSFFSYMDR 600
              DILR HLEGPDYKMT+ VEP+  +  ++ VSVSVLVGRKDTNK+A +++RS F Y+DR
Sbjct: 121  ICDILRFHLEGPDYKMTLPVEPRVKIPLSQTVSVSVLVGRKDTNKVARVINRSVFDYIDR 180

Query: 599  TAYRALAYDYLDFSPVHPFVAGIRAWISLLFLDGVSDGVKPGSDGLINVFGIAMDFCDVA 420
            TAYR++A++YLDFSP HPFV GIRAWISLLF++        G++G+I+VFGI MDF D A
Sbjct: 181  TAYRSMAFEYLDFSPAHPFVPGIRAWISLLFME-------DGNEGVIDVFGIEMDFRDAA 233

Query: 419  NSEEEVLWLLDMLDWK 372
            NS EEVLWLLDMLDWK
Sbjct: 234  NSREEVLWLLDMLDWK 249


>emb|CAN69611.1| hypothetical protein VITISV_043871 [Vitis vinifera]
          Length = 239

 Score =  355 bits (910), Expect = 2e-95
 Identities = 168/256 (65%), Positives = 201/256 (78%)
 Frame = -1

Query: 1139 MAYAEILKAVFPFLEGNDLASCMQVCKLWRDIASDDYFWKCICTKRWPSIGKKPSDSSMT 960
            MAY E+LKAVFP LEG DLASCM VCK WRDIA DDYFWKC+C KRWPSI K+PS  ++T
Sbjct: 1    MAYEEVLKAVFPLLEGADLASCMLVCKQWRDIAQDDYFWKCVCAKRWPSICKRPSPPTVT 60

Query: 959  YHKFFLTFSKRHKRRTLLPPQLSFDDLDFYIDIWAGESLIFSEAIPGPILQGGIKIHPSG 780
            Y+K   TF K           LSF+DL+FYIDIW GE  IFSE +PGP+LQ GI + P G
Sbjct: 61   YYKLCQTFYKH----------LSFNDLEFYIDIWTGERSIFSEVVPGPVLQTGIVVPPPG 110

Query: 779  TSDILRCHLEGPDYKMTVLVEPKFTLCSNENVSVSVLVGRKDTNKIACIVHRSFFSYMDR 600
              D+LR HLEGP+YKMT+LVEP+FT+     VSVSVLVGRKD+ K+ACI+++S F Y+DR
Sbjct: 111  ICDMLRFHLEGPEYKMTLLVEPRFTVPLMATVSVSVLVGRKDSKKVACIINKSMFDYIDR 170

Query: 599  TAYRALAYDYLDFSPVHPFVAGIRAWISLLFLDGVSDGVKPGSDGLINVFGIAMDFCDVA 420
            TAYRALA+DYLDFSP++PF++GIRAWISLLF++        G++G+INVFG+ MDFCD A
Sbjct: 171  TAYRALAFDYLDFSPIYPFISGIRAWISLLFME-------DGNEGVINVFGLEMDFCDAA 223

Query: 419  NSEEEVLWLLDMLDWK 372
            NSE EVLWLLDMLDWK
Sbjct: 224  NSEPEVLWLLDMLDWK 239


>gb|ABB29946.1| F-box family protein-like [Solanum tuberosum]
          Length = 250

 Score =  354 bits (909), Expect = 2e-95
 Identities = 168/257 (65%), Positives = 206/257 (80%), Gaps = 1/257 (0%)
 Frame = -1

Query: 1139 MAYAEILKAVFPFLEGNDLASCMQVCKLWRDIASDDYFWKCICTKRWPSIGKKPSDSSMT 960
            MA  EILKAVFPFLEG +LA+CM VCK WRDIA DDYFWKC+C+K+WPSI K+ S  ++T
Sbjct: 1    MACDEILKAVFPFLEGTELATCMLVCKQWRDIARDDYFWKCLCSKKWPSICKRSSPPTVT 60

Query: 959  YHKFFLTFSKRHKRRTLLPPQLSFDDLDFYIDIWAGESLIFSEAIPGPILQGGIKIHPSG 780
            Y+  F  F +R  RRT+LPP+LSF DL+FYIDIW  E +IFS+ +PGP+LQ GI I P G
Sbjct: 61   YYNLFQNFHRRPYRRTVLPPKLSFSDLEFYIDIWTEEKIIFSDVVPGPVLQKGIWIPPPG 120

Query: 779  TSDILRCHLEGPDYKMTVLVEPKFTLCSNENVSVSVLVGRKDTNKIACIVHRSFFSYMDR 600
              D+L+ HLEGP+YKMT+ VEP+FT+   + VSVSVLVGRKDTNK+ACI+ +S F Y+DR
Sbjct: 121  ICDVLKFHLEGPEYKMTLPVEPRFTIPLCQTVSVSVLVGRKDTNKVACIIKKSLFDYIDR 180

Query: 599  TAYRALAYDYLDF-SPVHPFVAGIRAWISLLFLDGVSDGVKPGSDGLINVFGIAMDFCDV 423
            TAYRALAYDYLDF SP+  FV+G+RAWISLLF+D        G++G ++VFGI MDFCD 
Sbjct: 181  TAYRALAYDYLDFSSPMCLFVSGVRAWISLLFMD-------HGNEGALDVFGIEMDFCDA 233

Query: 422  ANSEEEVLWLLDMLDWK 372
            ANSE+EVLWLLDML+WK
Sbjct: 234  ANSEDEVLWLLDMLEWK 250


>ref|XP_002324105.1| predicted protein [Populus trichocarpa] gi|222867107|gb|EEF04238.1|
            predicted protein [Populus trichocarpa]
          Length = 249

 Score =  348 bits (893), Expect = 2e-93
 Identities = 163/256 (63%), Positives = 198/256 (77%)
 Frame = -1

Query: 1139 MAYAEILKAVFPFLEGNDLASCMQVCKLWRDIASDDYFWKCICTKRWPSIGKKPSDSSMT 960
            M+Y EILKAVFP LEG DLASC+ VCK WRDIA DDY WKC+C KRWPSI K+P+  ++T
Sbjct: 1    MSYVEILKAVFPLLEGADLASCVAVCKQWRDIAQDDYLWKCLCAKRWPSICKRPNPPTVT 60

Query: 959  YHKFFLTFSKRHKRRTLLPPQLSFDDLDFYIDIWAGESLIFSEAIPGPILQGGIKIHPSG 780
            Y+K + TF K  +++TLLPP+LSFD+L+F+IDIW G+ LIFSE + GP+LQ GIK  P  
Sbjct: 61   YYKLYQTFYKHQRQQTLLPPRLSFDNLEFFIDIWTGDKLIFSEVVSGPVLQTGIKCPPPR 120

Query: 779  TSDILRCHLEGPDYKMTVLVEPKFTLCSNENVSVSVLVGRKDTNKIACIVHRSFFSYMDR 600
              D L  HLEGPDYKM + VEP+F     E VSVSVLVGRKD NK+ACI+++S F Y+DR
Sbjct: 121  ICDRLGFHLEGPDYKMILPVEPRFKAPLGETVSVSVLVGRKDNNKVACIINKSVFDYIDR 180

Query: 599  TAYRALAYDYLDFSPVHPFVAGIRAWISLLFLDGVSDGVKPGSDGLINVFGIAMDFCDVA 420
            TAYRA+A+DYL FSP HPFV GIRAWISLLF+D  +D V       ++VFGI +DFCD A
Sbjct: 181  TAYRAMAFDYLGFSPAHPFVPGIRAWISLLFVDDKNDSV-------LDVFGIEIDFCDAA 233

Query: 419  NSEEEVLWLLDMLDWK 372
             S +EVLWLLD+LDWK
Sbjct: 234  KSRDEVLWLLDILDWK 249