BLASTX nr result

ID: Coptis24_contig00007098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007098
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270305.1| PREDICTED: glutaminyl-tRNA synthetase [Vitis...   553   e-155
ref|XP_002283636.1| PREDICTED: glutaminyl-tRNA synthetase isofor...   543   e-152
ref|XP_002312407.1| predicted protein [Populus trichocarpa] gi|2...   539   e-151
ref|XP_002526992.1| glutaminyl-tRNA synthetase, putative [Ricinu...   537   e-150
ref|NP_173906.2| putative tRNA-glutamine synthetase [Arabidopsis...   527   e-147

>ref|XP_002270305.1| PREDICTED: glutaminyl-tRNA synthetase [Vitis vinifera]
            gi|297734636|emb|CBI16687.3| unnamed protein product
            [Vitis vinifera]
          Length = 790

 Score =  553 bits (1424), Expect = e-155
 Identities = 277/395 (70%), Positives = 312/395 (78%), Gaps = 2/395 (0%)
 Frame = +1

Query: 127  LELFLKIGLEEXXXXXXXXXXXXXXXLLSVIHEAGVTEGCSKTIGNLLYTVATKFPANAL 306
            L+LFLKIGL+E               L +VIHEA VT+GCS+TIGNLLYTVATKFPANAL
Sbjct: 9    LDLFLKIGLDERTARNTIANNKVTSNLTAVIHEAAVTDGCSRTIGNLLYTVATKFPANAL 68

Query: 307  VHRRTLLEYIVSLNIKSTAQLEAALLFLGKIGPEEFDVKAFEEACGVGVEVTREEIEQTV 486
            VHR TLL+YIVS  IK+ AQLEAA  F    G E F +  FEEACGVGV+V+ E++E+TV
Sbjct: 69   VHRPTLLQYIVSSKIKTPAQLEAAFSFFTSTGSENFQLNDFEEACGVGVDVSAEDVERTV 128

Query: 487  GKVVEEKKSTILESRYRTE-GELFAQVRKILPWADTKTVKEEILRKLYELVGERTAXXXX 663
             ++ EE KSTILE RYRT  G+LF  VRK  PWAD K VK+ I  KLYEL+G RTA    
Sbjct: 129  NEIFEENKSTILEHRYRTNVGDLFGHVRKRQPWADPKIVKQLIDAKLYELLGARTAADDE 188

Query: 664  XXXXXXXXXXXXXXXXXX-VDVPTAVPSEEELNPFLIFPKPEENLKVHTEVFFSDRPVLR 840
                               ++   A P+EEELNPFLIFP+PEEN KVHTE+FFSDRPVLR
Sbjct: 189  KPSKKKKEKPVKVEDKTVALETSPAQPAEEELNPFLIFPQPEENFKVHTEIFFSDRPVLR 248

Query: 841  VCNTKEMLDKHLKATGGRVFSRFPPEPNGYLHIGHAKALFVSFGLAKERDGCCYLRFDDT 1020
             CN+KEML++HLKATG RVF+RFPPEPNGYLHIGHAKA+FVSFGLAKER GCCYLRFDDT
Sbjct: 249  PCNSKEMLERHLKATGERVFTRFPPEPNGYLHIGHAKAMFVSFGLAKERGGCCYLRFDDT 308

Query: 1021 NPEAEKKEYIDHIKEIVQWMGWEPFKITYTSDYFQELHDLAVELIRRGHAYVDHQNPEEV 1200
            NPEAEKKEYIDHI+EIVQWMGWEPFKITYTSDYFQ+L+DLAVELIRRG AYVDHQ PEE+
Sbjct: 309  NPEAEKKEYIDHIEEIVQWMGWEPFKITYTSDYFQDLYDLAVELIRRGQAYVDHQTPEEI 368

Query: 1201 KEYREKKMNSPWRDRPREESLKLFNDMRRGLIEEG 1305
            KEYREKKMNSPWRDRP EESLKLF++MRRG+IEEG
Sbjct: 369  KEYREKKMNSPWRDRPIEESLKLFDEMRRGMIEEG 403


>ref|XP_002283636.1| PREDICTED: glutaminyl-tRNA synthetase isoform 1 [Vitis vinifera]
            gi|297737799|emb|CBI27000.3| unnamed protein product
            [Vitis vinifera]
          Length = 791

 Score =  543 bits (1400), Expect = e-152
 Identities = 270/394 (68%), Positives = 309/394 (78%), Gaps = 1/394 (0%)
 Frame = +1

Query: 127  LELFLKIGLEEXXXXXXXXXXXXXXXLLSVIHEAGVTEGCSKTIGNLLYTVATKFPANAL 306
            L+LFLKIGL+E               L +VIHEA +T GC++T+GNLLYTVATKFPANAL
Sbjct: 12   LDLFLKIGLDERTARNTIANNKVTANLTAVIHEAALTNGCNRTVGNLLYTVATKFPANAL 71

Query: 307  VHRRTLLEYIVSLNIKSTAQLEAALLFLGKIGPEEFDVKAFEEACGVGVEVTREEIEQTV 486
            VHR TLL+YIVS  IK+ AQLEAA  F   IG E F++K FEE+CGVG++V  E+IE+TV
Sbjct: 72   VHRPTLLQYIVSSKIKTPAQLEAAFSFYSSIGSENFELKEFEESCGVGIDVPIEDIERTV 131

Query: 487  GKVVEEKKSTILESRYRTE-GELFAQVRKILPWADTKTVKEEILRKLYELVGERTAXXXX 663
             ++ EE K+ IL  RY+T  G+LF  VRK  PWAD K VK+ I  KLY L+GE+TA    
Sbjct: 132  NEIFEENKNVILGQRYQTNVGDLFGHVRKSHPWADPKIVKQLIDVKLYGLLGEKTAADDE 191

Query: 664  XXXXXXXXXXXXXXXXXXVDVPTAVPSEEELNPFLIFPKPEENLKVHTEVFFSDRPVLRV 843
                              VD      SEEELNPFLIFP+PEEN KVHTE+FFSDRPVLRV
Sbjct: 192  KPSRKKKEKQAKSESIA-VDTHPPPTSEEELNPFLIFPQPEENFKVHTEIFFSDRPVLRV 250

Query: 844  CNTKEMLDKHLKATGGRVFSRFPPEPNGYLHIGHAKALFVSFGLAKERDGCCYLRFDDTN 1023
            CNT+EML+KHLKATGGRVF+RFPPEPNGYLHIGHAKA+FVSFGLAKERDGCCYLR+DDTN
Sbjct: 251  CNTREMLEKHLKATGGRVFTRFPPEPNGYLHIGHAKAMFVSFGLAKERDGCCYLRYDDTN 310

Query: 1024 PEAEKKEYIDHIKEIVQWMGWEPFKITYTSDYFQELHDLAVELIRRGHAYVDHQNPEEVK 1203
            PEAEKKEYIDHI EIV+WMGWEPFK+TYTSDYFQ+L+DLAVELIRR HAYVDHQ PEE+K
Sbjct: 311  PEAEKKEYIDHIDEIVRWMGWEPFKVTYTSDYFQDLYDLAVELIRRNHAYVDHQTPEEIK 370

Query: 1204 EYREKKMNSPWRDRPREESLKLFNDMRRGLIEEG 1305
            EYREKKMNSPWRDRP  ESL+LF+ MRRG+IEEG
Sbjct: 371  EYREKKMNSPWRDRPIAESLELFDQMRRGMIEEG 404


>ref|XP_002312407.1| predicted protein [Populus trichocarpa] gi|222852227|gb|EEE89774.1|
            predicted protein [Populus trichocarpa]
          Length = 786

 Score =  539 bits (1388), Expect = e-151
 Identities = 271/394 (68%), Positives = 305/394 (77%), Gaps = 1/394 (0%)
 Frame = +1

Query: 127  LELFLKIGLEEXXXXXXXXXXXXXXXLLSVIHEAGVTEGCSKTIGNLLYTVATKFPANAL 306
            LELFLKIGL+E               L +VIHEAGVTEGC++TIGNLLY VATK PANAL
Sbjct: 13   LELFLKIGLDERTARNTIANNKVTNNLTAVIHEAGVTEGCNRTIGNLLYMVATKHPANAL 72

Query: 307  VHRRTLLEYIVSLNIKSTAQLEAALLFLGKIGPEEFDVKAFEEACGVGVEVTREEIEQTV 486
            +HR TLL YIVS  IK+ AQLEAA  FL     E F++K FEEACGVGVEV+ E+IEQTV
Sbjct: 73   IHRPTLLGYIVSAKIKTPAQLEAAFSFLSSTASESFELKEFEEACGVGVEVSEEDIEQTV 132

Query: 487  GKVVEEKKSTILESRYRTE-GELFAQVRKILPWADTKTVKEEILRKLYELVGERTAXXXX 663
             +V ++ K +ILE RYR   G+LF  VRK LPWAD K VK+ I  KLYEL+GERTA    
Sbjct: 133  NEVFKQNKGSILELRYRINVGDLFGHVRKRLPWADPKIVKKLIDAKLYELLGERTAADNE 192

Query: 664  XXXXXXXXXXXXXXXXXXVDVPTAVPSEEELNPFLIFPKPEENLKVHTEVFFSDRPVLRV 843
                               D     PSE+ LNPFLIFP PEEN KVHTEVFFSDRPVLR 
Sbjct: 193  KPSKQKKEKPAKVEDKKVADENPVQPSED-LNPFLIFPNPEENFKVHTEVFFSDRPVLRC 251

Query: 844  CNTKEMLDKHLKATGGRVFSRFPPEPNGYLHIGHAKALFVSFGLAKERDGCCYLRFDDTN 1023
            CNTKE+LDKHLK T G+V++RFPPEPNGYLHIGHAKA+FVSFGLAKER GCCYLR+DDTN
Sbjct: 252  CNTKEVLDKHLKRTSGKVYTRFPPEPNGYLHIGHAKAMFVSFGLAKERGGCCYLRYDDTN 311

Query: 1024 PEAEKKEYIDHIKEIVQWMGWEPFKITYTSDYFQELHDLAVELIRRGHAYVDHQNPEEVK 1203
            PEAEKKEYIDHI+EIV+WMGW+PFKITYTSDYFQEL++LAVELIRRGHAYVDHQ PEE+K
Sbjct: 312  PEAEKKEYIDHIEEIVEWMGWKPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIK 371

Query: 1204 EYREKKMNSPWRDRPREESLKLFNDMRRGLIEEG 1305
            +YREKKM+SPWRDRP  ESLKLF +MR G+IEEG
Sbjct: 372  DYREKKMDSPWRDRPIAESLKLFEEMRLGMIEEG 405


>ref|XP_002526992.1| glutaminyl-tRNA synthetase, putative [Ricinus communis]
            gi|223533627|gb|EEF35364.1| glutaminyl-tRNA synthetase,
            putative [Ricinus communis]
          Length = 793

 Score =  537 bits (1384), Expect = e-150
 Identities = 265/398 (66%), Positives = 307/398 (77%), Gaps = 1/398 (0%)
 Frame = +1

Query: 115  ASDSLELFLKIGLEEXXXXXXXXXXXXXXXLLSVIHEAGVTEGCSKTIGNLLYTVATKFP 294
            A+  LELFLKIGL+E               L +VIHEAGV EGCS+T+GNLLYTVATK+P
Sbjct: 10   ATPPLELFLKIGLDERTAKNTIANNKVTNNLTTVIHEAGVNEGCSRTVGNLLYTVATKYP 69

Query: 295  ANALVHRRTLLEYIVSLNIKSTAQLEAALLFLGKIGPEEFDVKAFEEACGVGVEVTREEI 474
             NALVHR  LLEYIVS  IK++AQLEAA  FL     E F +  FEEACGVGVEV+ ++I
Sbjct: 70   TNALVHRPALLEYIVSSKIKTSAQLEAAFSFLSNTASESFKLNDFEEACGVGVEVSADDI 129

Query: 475  EQTVGKVVEEKKSTILESRYRTE-GELFAQVRKILPWADTKTVKEEILRKLYELVGERTA 651
            E+   +V E+ K +ILE RYRT  G+LF  VR  LPWAD K VK+ I  KL+EL+GERTA
Sbjct: 130  EKAANEVFEQNKVSILELRYRTNVGDLFGHVRNRLPWADPKIVKQLIDAKLFELLGERTA 189

Query: 652  XXXXXXXXXXXXXXXXXXXXXXVDVPTAVPSEEELNPFLIFPKPEENLKVHTEVFFSDRP 831
                                   D P   PSEE+LNPFLIFP P+EN KVHTE+ FSD+ 
Sbjct: 190  ADNEKPSKQKKEKPAKVQEKKVADCPVQ-PSEEDLNPFLIFPNPDENFKVHTEILFSDKS 248

Query: 832  VLRVCNTKEMLDKHLKATGGRVFSRFPPEPNGYLHIGHAKALFVSFGLAKERDGCCYLRF 1011
            +LR CNTKEMLDKHLK TGG+V++RFPPEPNGYLHIGHAKA+FVSFGLAKER GCCYLR+
Sbjct: 249  ILRCCNTKEMLDKHLKETGGKVYTRFPPEPNGYLHIGHAKAMFVSFGLAKERGGCCYLRY 308

Query: 1012 DDTNPEAEKKEYIDHIKEIVQWMGWEPFKITYTSDYFQELHDLAVELIRRGHAYVDHQNP 1191
            DDTNPEAEK+EYIDHI+EIV+WMGW+PFKITYTSDYFQ+L+DLAVELIRRGHAYVDHQ P
Sbjct: 309  DDTNPEAEKREYIDHIEEIVEWMGWKPFKITYTSDYFQDLYDLAVELIRRGHAYVDHQTP 368

Query: 1192 EEVKEYREKKMNSPWRDRPREESLKLFNDMRRGLIEEG 1305
            +E+KEYREKKMNSPWRDRP  ESLKLF++MR+G+IEEG
Sbjct: 369  DEIKEYREKKMNSPWRDRPIAESLKLFDEMRQGMIEEG 406


>ref|NP_173906.2| putative tRNA-glutamine synthetase [Arabidopsis thaliana]
            gi|17065036|gb|AAL32672.1| Unknown protein [Arabidopsis
            thaliana] gi|21387137|gb|AAM47972.1| unknown protein
            [Arabidopsis thaliana] gi|332192489|gb|AEE30610.1|
            putative tRNA-glutamine synthetase [Arabidopsis thaliana]
          Length = 795

 Score =  527 bits (1358), Expect = e-147
 Identities = 262/397 (65%), Positives = 303/397 (76%), Gaps = 3/397 (0%)
 Frame = +1

Query: 124  SLELFLKIGLEEXXXXXXXXXXXXXXXLLSVIHEAGVTEGCSKTIGNLLYTVATKFPANA 303
            S+ELF+ IGL+E               L +VIHEA VT+GC +  GNLLY+VATKFP NA
Sbjct: 11   SIELFISIGLDEKTARNTINNNKVTANLTAVIHEAAVTDGCDRNTGNLLYSVATKFPTNA 70

Query: 304  LVHRRTLLEYIVSLNIKSTAQLEAALLFLGKIGPEEFDVKAFEEACGVGVEVTREEIEQT 483
            LVHR TLL+YIV+  IK+ AQLEAA  F    GPE+F +  FEEACGVG+EV+ E+IE+ 
Sbjct: 71   LVHRPTLLKYIVNSKIKTPAQLEAAFAFFASTGPEDFKLNEFEEACGVGIEVSPEDIEKA 130

Query: 484  VGKVVEEKKSTILESRYRTE-GELFAQVRKILPWADTKTVKEEILRKLYELVGERTAXXX 660
            V  + EE K TILE RYRT  GELF  VRK LPWAD K VK+ I  K+YEL+GE+TA   
Sbjct: 131  VKGIFEENKKTILEQRYRTNVGELFGHVRKSLPWADPKIVKKLIDEKMYELLGEKTAADN 190

Query: 661  XXXXXXXXXXXXXXXXXXXVDV--PTAVPSEEELNPFLIFPKPEENLKVHTEVFFSDRPV 834
                                 V   TA PSEEELNP+ IFP+PE+N  VHTEVFFSD  +
Sbjct: 191  EKPTKKKEKKEKPAKVEEKKAVVETTAEPSEEELNPYTIFPQPEQNFMVHTEVFFSDGSI 250

Query: 835  LRVCNTKEMLDKHLKATGGRVFSRFPPEPNGYLHIGHAKALFVSFGLAKERDGCCYLRFD 1014
            LR  NTKE+LDKHLK TGG+V++RFPPEPNGYLHIGHAKA+FV FGLAKER GCCYLR+D
Sbjct: 251  LRCSNTKEVLDKHLKVTGGKVYTRFPPEPNGYLHIGHAKAMFVDFGLAKERGGCCYLRYD 310

Query: 1015 DTNPEAEKKEYIDHIKEIVQWMGWEPFKITYTSDYFQELHDLAVELIRRGHAYVDHQNPE 1194
            DTNPEAEK+EYI+HI+EIV+WMGWEPFKITYTSDYFQEL+DLAVELIRRGHAYVDHQ  +
Sbjct: 311  DTNPEAEKEEYINHIEEIVKWMGWEPFKITYTSDYFQELYDLAVELIRRGHAYVDHQTAD 370

Query: 1195 EVKEYREKKMNSPWRDRPREESLKLFNDMRRGLIEEG 1305
            E+KEYREKKMNSPWRDRP EESLKLF++MRRG+IEEG
Sbjct: 371  EIKEYREKKMNSPWRDRPIEESLKLFDEMRRGIIEEG 407


Top