BLASTX nr result

ID: Coptis24_contig00007040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007040
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ23220.1| DELLA protein [Pyrus x bretschneideri]                 106   2e-21
gb|AFJ23219.1| DELLA protein [Pyrus betulifolia]                      106   2e-21
sp|Q9ST48.1|DWRF8_MAIZE RecName: Full=DELLA protein DWARF8; Shor...   105   3e-21
tpg|DAA50919.1| TPA: dwarf plant8, partial [Zea mays]                 105   3e-21
tpg|DAA50918.1| TPA: dwarf plant8 [Zea mays]                          105   3e-21

>gb|AFJ23220.1| DELLA protein [Pyrus x bretschneideri]
          Length = 634

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/105 (59%), Positives = 74/105 (70%), Gaps = 4/105 (3%)
 Frame = +2

Query: 164 EHNSSSSVVTEMGGS-GKNKMFEEQQ---DAGFDELLAVLGYKVRSSDMAEVASKLEQLE 331
           +H   S   T  GG  GK KM+E++    D G DELLAVLGYKVRSSDMAEVA KLEQLE
Sbjct: 17  QHPDPSMASTSAGGGFGKAKMWEDESHRIDGGMDELLAVLGYKVRSSDMAEVAQKLEQLE 76

Query: 332 MAMSVSNSNNTSFEEDGLLSQLSSQTVHYNPSDLSSWLQSMLTEI 466
             M  +       +EDG LSQL+S TVHYNP+DLS+WL+SM++EI
Sbjct: 77  EFMGCA-------QEDG-LSQLASDTVHYNPADLSTWLESMISEI 113


>gb|AFJ23219.1| DELLA protein [Pyrus betulifolia]
          Length = 634

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/105 (59%), Positives = 74/105 (70%), Gaps = 4/105 (3%)
 Frame = +2

Query: 164 EHNSSSSVVTEMGGS-GKNKMFEEQQ---DAGFDELLAVLGYKVRSSDMAEVASKLEQLE 331
           +H   S   T  GG  GK KM+E++    D G DELLAVLGYKVRSSDMAEVA KLEQLE
Sbjct: 17  QHPDPSMASTSAGGGFGKAKMWEDESHRIDGGMDELLAVLGYKVRSSDMAEVAQKLEQLE 76

Query: 332 MAMSVSNSNNTSFEEDGLLSQLSSQTVHYNPSDLSSWLQSMLTEI 466
             M  +       +EDG LSQL+S TVHYNP+DLS+WL+SM++EI
Sbjct: 77  EFMGCA-------QEDG-LSQLASDTVHYNPADLSTWLESMISEI 113


>sp|Q9ST48.1|DWRF8_MAIZE RecName: Full=DELLA protein DWARF8; Short=Protein dwarf-8
           gi|5640155|emb|CAB51557.1| gibberellin response
           modulator [Zea mays] gi|219884989|gb|ACL52869.1| unknown
           [Zea mays] gi|414872363|tpg|DAA50920.1| TPA: dwarf
           plant8 [Zea mays]
          Length = 630

 Score =  105 bits (263), Expect = 3e-21
 Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 7/111 (6%)
 Frame = +2

Query: 155 MKREHNSSSSVVTEMGGSGKNKMFE------EQQDAGFDELLAVLGYKVRSSDMAEVASK 316
           MKRE+  +     +MG S K+KM        EQ++   DELLA LGYKVRSSDMA+VA K
Sbjct: 1   MKREYQDAGGSGGDMGSS-KDKMMAAAAGAGEQEEEDVDELLAALGYKVRSSDMADVAQK 59

Query: 317 LEQLEMAMSVSNSNNT-SFEEDGLLSQLSSQTVHYNPSDLSSWLQSMLTEI 466
           LEQLEMAM +       +  +DG +S L++ TVHYNPSDLSSW++SML+E+
Sbjct: 60  LEQLEMAMGMGGVGGAGATADDGFVSHLATDTVHYNPSDLSSWVESMLSEL 110


>tpg|DAA50919.1| TPA: dwarf plant8, partial [Zea mays]
          Length = 232

 Score =  105 bits (263), Expect = 3e-21
 Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 7/111 (6%)
 Frame = +2

Query: 155 MKREHNSSSSVVTEMGGSGKNKMFE------EQQDAGFDELLAVLGYKVRSSDMAEVASK 316
           MKRE+  +     +MG S K+KM        EQ++   DELLA LGYKVRSSDMA+VA K
Sbjct: 1   MKREYQDAGGSGGDMGSS-KDKMMAAAAGAGEQEEEDVDELLAALGYKVRSSDMADVAQK 59

Query: 317 LEQLEMAMSVSNSNNT-SFEEDGLLSQLSSQTVHYNPSDLSSWLQSMLTEI 466
           LEQLEMAM +       +  +DG +S L++ TVHYNPSDLSSW++SML+E+
Sbjct: 60  LEQLEMAMGMGGVGGAGATADDGFVSHLATDTVHYNPSDLSSWVESMLSEL 110


>tpg|DAA50918.1| TPA: dwarf plant8 [Zea mays]
          Length = 584

 Score =  105 bits (263), Expect = 3e-21
 Identities = 59/111 (53%), Positives = 76/111 (68%), Gaps = 7/111 (6%)
 Frame = +2

Query: 155 MKREHNSSSSVVTEMGGSGKNKMFE------EQQDAGFDELLAVLGYKVRSSDMAEVASK 316
           MKRE+  +     +MG S K+KM        EQ++   DELLA LGYKVRSSDMA+VA K
Sbjct: 1   MKREYQDAGGSGGDMGSS-KDKMMAAAAGAGEQEEEDVDELLAALGYKVRSSDMADVAQK 59

Query: 317 LEQLEMAMSVSNSNNT-SFEEDGLLSQLSSQTVHYNPSDLSSWLQSMLTEI 466
           LEQLEMAM +       +  +DG +S L++ TVHYNPSDLSSW++SML+E+
Sbjct: 60  LEQLEMAMGMGGVGGAGATADDGFVSHLATDTVHYNPSDLSSWVESMLSEL 110


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