BLASTX nr result
ID: Coptis24_contig00007027
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007027
(2107 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245... 460 e-127
ref|XP_002312802.1| bromodomain protein [Populus trichocarpa] gi... 427 e-117
ref|XP_002520929.1| bromodomain-containing protein [Ricinus comm... 412 e-112
ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244... 389 e-105
emb|CAN74748.1| hypothetical protein VITISV_012026 [Vitis vinifera] 389 e-105
>ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245230 [Vitis vinifera]
Length = 750
Score = 460 bits (1183), Expect = e-127
Identities = 294/603 (48%), Positives = 366/603 (60%), Gaps = 40/603 (6%)
Frame = -2
Query: 1887 GTEMESSSTTAMPDTNLLVFILDTLQKKDTYGVFSEPVDSKELPDYHDIVEHPMDFRTVR 1708
GTE++ T +PD LLVF+LD LQKKD+YGVFSEPVD KELPDYH+++EHPMDF TVR
Sbjct: 165 GTELDGGPATPLPDKKLLVFVLDRLQKKDSYGVFSEPVDPKELPDYHEVIEHPMDFGTVR 224
Query: 1707 EKLETGAYVKLEQFEKDVFLICSNAMRYNALDTIYFRQARSIEELAKKNFENVRQDSDDN 1528
+ L GAY LEQFEKDVFLICSNAM+YNA DTIYF+QARSI+ELAKKNFEN+RQDSDDN
Sbjct: 225 KNLAGGAYASLEQFEKDVFLICSNAMQYNAPDTIYFKQARSIQELAKKNFENLRQDSDDN 284
Query: 1527 ELQQTIVKRGRPPTTNPKKRLGRPPIVRTGSDLSSGATLADAGEN----NIDLRRGSY-- 1366
E + +RGRPPT N KK LGRP + R GS+ SS ATLA GEN N DLR+G+
Sbjct: 285 EPEPK--RRGRPPTKNIKKPLGRPSLERPGSEFSSDATLATGGENTMWSNHDLRKGALIS 342
Query: 1365 EKSGPSETSGRIDHRSCSNDSFT-WSSEHTSGGNDEFPASVVKGISVKFGKKLFVLDESR 1189
+KSGP+++ GR H + +D T WS++ +DEF S++KGIS+K KK FVLDE+R
Sbjct: 343 DKSGPADSFGRSLHGTRYSDGNTGWSADQKLERHDEFTGSILKGISLKHAKKPFVLDENR 402
Query: 1188 RNTYKQSH--LSGRSFPSVLATFRGEKKQLMAVGLHMEHGFARSLARFAASLGPVAWKIA 1015
RNTYKQS GR PSVL TF GEKKQLM VGL+ E+G+ARSLARFA++LGPVAWKIA
Sbjct: 403 RNTYKQSSSIAVGRE-PSVLTTFDGEKKQLMPVGLNAEYGYARSLARFASNLGPVAWKIA 461
Query: 1014 SKKIERALPTGVKFGPGWVGENESPLSESLLTIHTPAHLFSEQPFSVSKISSSATVRSIP 835
+KKIE++LP GVKFGPGWVGEN+ + P LF +S + + S+
Sbjct: 462 AKKIEKSLPPGVKFGPGWVGEND---------VIPPKPLFVPSSTPLSSLPGDSIPCSM- 511
Query: 834 DVKVDKVS---------ERQVPSNNSASDVYLNRISSPSTAASSLV--GNLSSELTTESV 688
D + DK S ER V S +A + + S AAS L+ N +S ++ S
Sbjct: 512 DSQEDKPSQKTGGIGLPERNVLSARAALANHPGKSLLTSAAASPLINTANKASGPSSGST 571
Query: 687 EAT-RPKLESRDCLLSSNADGTMLNPPFQIHQGP-VLNPSVNSFQ-----NLASQMDKVV 529
EA+ +S +L+S+A PPFQIHQGP L+P +N F N+ +QM K +
Sbjct: 572 EASIGLNAQSGFSILNSSAGAVRPRPPFQIHQGPTALHPGMNGFNGAYGFNIPTQMGKPM 631
Query: 528 RPLMPVGSVTSAATVHSELHDAFTKTKNGIVQSISMNEIEAGNMKSPENLKATNSEISFV 349
P G A ++ DA ++T N + + K E TNS +
Sbjct: 632 GAARPTGFNLQA----PQMLDAISRTTPNFGHPGMGNNLTPEDPKFLEKSTTTNSSSPLL 687
Query: 348 V-PNGEG--------FQQLSCQDYSQHQKLDSVPPDLNVRLQSP----VXXXXXXXSDLA 208
P GE Q S Q+ DSVPPDLNVR QSP DLA
Sbjct: 688 PHPGGEAAAAPRVGPHPQPSWPGLPPQQRQDSVPPDLNVRFQSPGSPSSSKVDSTQPDLA 747
Query: 207 LQL 199
LQL
Sbjct: 748 LQL 750
>ref|XP_002312802.1| bromodomain protein [Populus trichocarpa] gi|222849210|gb|EEE86757.1|
bromodomain protein [Populus trichocarpa]
Length = 758
Score = 427 bits (1098), Expect = e-117
Identities = 269/606 (44%), Positives = 359/606 (59%), Gaps = 47/606 (7%)
Frame = -2
Query: 1875 ESSSTTAMPDTNLLVFILDTLQKKDTYGVFSEPVDSKELPDYHDIVEHPMDFRTVREKLE 1696
+S +T +PD LL+ ILD LQKKDTYGVFSEPVD ELPDY +++EHPMDF TVR+KL
Sbjct: 173 DSGPSTPLPDKKLLLSILDRLQKKDTYGVFSEPVDLDELPDYLEVIEHPMDFGTVRKKLT 232
Query: 1695 TGAYVKLEQFEKDVFLICSNAMRYNALDTIYFRQARSIEELAKKNFENVRQDSDDNELQQ 1516
GAY LE FE++VFLIC+NAM+YNA DTIYFRQARSI+ELAKKNFEN+RQDSDDNE +
Sbjct: 233 NGAYGSLELFEEEVFLICTNAMQYNAPDTIYFRQARSIQELAKKNFENLRQDSDDNEAEP 292
Query: 1515 TIVKRGRPPTTNPKKRLGRPPIVRTGSDLSSGATLADAGENNIDLRRGSYEKSGPSETSG 1336
+V+RGRPP+ N KK GRP + GS+ +G TLA GEN S EKSG +++SG
Sbjct: 293 KVVRRGRPPSENFKKSPGRPSLDLAGSEFPTGRTLATGGENR------SSEKSGFADSSG 346
Query: 1335 RIDHRSCSNDSFTWSSEHTSGGNDEFPASVVKGISVKFGKKLFVLDESRRNTYKQSHLS- 1159
+ N+++ S+++ NDE S++KG K KK LDE+RRNTYKQ H S
Sbjct: 347 QF--HGSRNEAYL-STDNRFERNDETAGSILKG---KHIKKHLALDENRRNTYKQFHPSA 400
Query: 1158 GRSFPSVLATFRGEKKQLMAVGLHMEHGFARSLARFAASLGPVAWKIASKKIERALPTGV 979
G PSVL TF E+KQL+AVGL EHG+ARS+ARFAA++GP +W IA K+IE++L GV
Sbjct: 401 GGRVPSVLTTFDAERKQLVAVGLLTEHGYARSIARFAANIGPFSWTIAVKRIEKSLAPGV 460
Query: 978 KFGPGWVGENESPLSESLLTIHTPAHLF------SEQPFSVSKISSSATVRSIPDVKVDK 817
KFGPGWVGEN+ P ++L + P+ L ++PFSV + S++ K K
Sbjct: 461 KFGPGWVGENDIPPQKALFSSPMPSQLAPPPSLPPQKPFSVLESSAATATACGVKSKQGK 520
Query: 816 VS---------ERQVPSNNSASDVYLNRISSPSTAASSLVGNLSSELTTESVEATRPKLE 664
+S E+QVPS S+ + + + ++ +S+ SE TE E+ PKL
Sbjct: 521 LSAKPEKDIFPEKQVPSTR-LSEAHFSSVPPSTSMTTSVSAVNKSEPFTERAESV-PKLN 578
Query: 663 SRDC--LLSSNADGTMLNPPFQIHQGPVLNPSVNSFQ-----NLASQMDKVVRPLMPVGS 505
S +L+S+ P Q+HQ P ++P F NLA+QM K++ P G
Sbjct: 579 SHSAFNVLNSSTGVMRQTAPSQLHQNPAIHPGTIGFNATYGFNLAAQMGKLIGVARPAG- 637
Query: 504 VTSAATVHSELHDAFTKTKNGIVQSISMNEIEAGNMKSPENLKATNSEISFVVPN--GEG 331
S++ D ++T + +V+S + N I + MK PEN +++ +IS +PN E
Sbjct: 638 ---LGIQSSQMADKVSRTNSNLVRSANANSINSEKMKFPEN--SSSIKISGALPNSGNEA 692
Query: 330 FQQLSCQDYSQ------------------HQKLDSVPPDLNVRLQSP----VXXXXXXXS 217
+ D Q HQK D+VPPDLNVR QSP
Sbjct: 693 VEAPRSVDQEQPTWQGLYPNPRPDSGSSSHQKSDAVPPDLNVRYQSPGSPSSGCIDPAQP 752
Query: 216 DLALQL 199
DLALQL
Sbjct: 753 DLALQL 758
>ref|XP_002520929.1| bromodomain-containing protein [Ricinus communis]
gi|223539895|gb|EEF41474.1| bromodomain-containing
protein [Ricinus communis]
Length = 767
Score = 412 bits (1059), Expect = e-112
Identities = 276/611 (45%), Positives = 357/611 (58%), Gaps = 47/611 (7%)
Frame = -2
Query: 1890 SGTEMESSSTTAMPDTNLLVFILDTLQKKDTYGVFSEPVDSKELPDYHDIVEHPMDFRTV 1711
+ T + +T +PD LL+FIL+ LQKKDTYGVFSEPVD ELPDYH+++EHPMDF TV
Sbjct: 176 TNTVQDLGPSTPLPDEKLLLFILERLQKKDTYGVFSEPVDPDELPDYHEVIEHPMDFGTV 235
Query: 1710 REKLETGAYVKLEQFEKDVFLICSNAMRYNALDTIYFRQARSIEELAKKNFENVRQDSDD 1531
R+KL G Y LEQFEKDVFLICSNAM+YNA DTIYFRQARSI+ELAKKNFEN+RQDSDD
Sbjct: 236 RKKLAGGVYANLEQFEKDVFLICSNAMQYNAPDTIYFRQARSIQELAKKNFENLRQDSDD 295
Query: 1530 N--ELQQTIVKRGRPPTTNPKKRLGRPPIVRTGSDLS-SGATLADAGENNI----DLRRG 1372
N E + T+V+RGRPPT N KK +GRP + R GS+ S ATLA GE+ I D R+G
Sbjct: 296 NEPEPEPTVVRRGRPPTKNLKKPVGRPSLDRAGSEYSLDAATLATGGESTIWSNNDHRKG 355
Query: 1371 SY--EKSGPSETSGRI-DHRSCSNDSFTWSSEHTSGGNDEFPASVVKGISVKFGKKLFVL 1201
+KSG +++ GR RS +N W +++ N+E SV+KG S+K+GK+ F L
Sbjct: 356 PLVSDKSGFTDSLGRSHGPRSDAN----WLTDNKFERNEEATGSVLKGNSIKYGKRQFGL 411
Query: 1200 DESRRNTYKQSHLSGRSFPSVLATFRGEKKQLMAVGLHMEHGFARSLARFAASLGPVAWK 1021
DE+RRNTYKQ LS PSVL TF E+KQLMAVGL EHG+ARSLARFAA++G VAWK
Sbjct: 412 DENRRNTYKQ--LSAGREPSVLITFDSERKQLMAVGLLSEHGYARSLARFAANVGAVAWK 469
Query: 1020 IASKKIERALPTGVKFGPGWVGENE-SPLSESLLTIHTPAHLFSEQPFSVSKISSSATVR 844
IAS +IER+LP G+KFGPGWV EN+ SP +L+ P QP S+ ++++AT
Sbjct: 470 IASTRIERSLPPGIKFGPGWVSENDISPQRAFVLSSPPPGLPLLLQPLSL-PVNTAATT- 527
Query: 843 SIPDVKVDKVSERQVPSNNS-------ASDVYLNRISSPSTAAS-SLVGNLSSELTTESV 688
+ + + Q P NN AS+ +++ SPS ++S S V E E
Sbjct: 528 ---SIAESRENLSQKPENNMIEDEKQLASEGHISNALSPSASSSTSPVAAGKPESCAERG 584
Query: 687 EATRPKLESRDCLLSSNADGTML--NPPFQIHQGPVLNPSVNSFQ-----NLASQMDKVV 529
EA +L S N +M+ NPP QI+ ++ +N F +L ++M K+V
Sbjct: 585 EAVE-RLNSHGGATLLNCSASMIRPNPPLQINS---VHRGMNRFNGTYGFDLPAEMGKLV 640
Query: 528 RPLMPVGSVTSAATVHSELHDAFTKTKNGIVQSISMNEIEAGNMKSPENLKATNSEISFV 349
MP G + ++ D K+ V + N + + K E+ + N +
Sbjct: 641 GTSMPAGFNFQS----PQMIDKILKSNTNFVHPATANSLNSEGPKLSEHSSSINPTGALP 696
Query: 348 VPNG---------------EGFQQLSCQD--YSQHQKLDSVPPDLNVRLQSP----VXXX 232
P +G L D S QK DSVPPDLNVR QSP
Sbjct: 697 NPGNDMEVPRYELEPRPSWQGSLHLPKSDAGLSPQQKSDSVPPDLNVRFQSPGSPSSNRV 756
Query: 231 XXXXSDLALQL 199
DLALQL
Sbjct: 757 DSAQPDLALQL 767
>ref|XP_002272566.2| PREDICTED: uncharacterized protein LOC100244510 [Vitis vinifera]
Length = 691
Score = 389 bits (1000), Expect = e-105
Identities = 254/600 (42%), Positives = 335/600 (55%), Gaps = 33/600 (5%)
Frame = -2
Query: 1899 DTASGTEMESSSTTAMPDTNLLVFILDTLQKKDTYGVFSEPVDSKELPDYHDIVEHPMDF 1720
DT G+ +ES TT +PD LLVFILD LQKKDT+GVF EPVD +ELPDYHDI+EHPMDF
Sbjct: 153 DTPQGSRLESGPTTPLPDKKLLVFILDRLQKKDTHGVFLEPVDPEELPDYHDIIEHPMDF 212
Query: 1719 RTVREKLETGAYVKLEQFEKDVFLICSNAMRYNALDTIYFRQARSIEELAKKNFENVRQD 1540
TVR+KL+ G Y LEQFE D+FLICSNAM+YNA DT+YFRQAR+I+ELAK++F N+RQ+
Sbjct: 213 GTVRKKLDGGLYSNLEQFESDIFLICSNAMQYNAPDTVYFRQARTIQELAKRDFANLRQE 272
Query: 1539 SDDNELQQTIVKRGRPPTTNPKKRLGRPPIVRTGSDLSSGATLADAGENNI-----DLRR 1375
DD E Q IV+RGRPPT + KK LG P+ + SS ATLA G+N+I +LR+
Sbjct: 273 GDDGEPQPKIVRRGRPPTKHLKKSLGSSPLEHVAPETSSEATLATGGDNSISSNSYNLRK 332
Query: 1374 GSYE-KSGPSETSGRIDHRSCSNDSF-TWSSEHTSGGNDEFPASVVKGISVKFGKKLFVL 1201
G K P++ S + + S ++D++ +W SE N+EFPAS++KG+S K GKK F L
Sbjct: 333 GPTPCKFRPADISVKAQYGSRNSDNYSSWLSE----WNNEFPASILKGVSTKHGKKPFEL 388
Query: 1200 DESRRNTYKQSHLSGRSFPSVLATFRGEKKQLMAVGLHMEHGFARSLARFAASLGPVAWK 1021
DE+RR+TYK L+ PSVL T GE KQLM+VGLH +HG+ARSLARFAA LG WK
Sbjct: 389 DENRRDTYKHP-LASNHEPSVLTTLHGELKQLMSVGLHSDHGYARSLARFAADLGQDVWK 447
Query: 1020 IASKKIERALPTGVKFGPGWVGENESPLSESLLTIHTPAHLFSEQPFSVSKISSSATVRS 841
IA+KKI LP GV+FGPGWVGENE+ +++P
Sbjct: 448 IAAKKIANVLPVGVEFGPGWVGENEA---------------LAQRP-------------- 478
Query: 840 IPDVKVDKVSERQVPSNNSASDVYLNRISSPSTAASSL-VGNLSS-ELTTESVEATRPKL 667
+ E Q SNNS + P+T+ SSL V N SS ES EA R
Sbjct: 479 ------SLLCENQKSSNNSTPP---HPQPPPTTSGSSLFVANRSSLPCKEESGEAVRG-- 527
Query: 666 ESRDCLLSSNADGTMLNPPFQIHQGPVLNPSVNSFQ-----NLASQMDKV---------- 532
L+S + T P +IHQ ++P +N F N +SQM
Sbjct: 528 ------LNSQIELTSRPAPPEIHQTLGIHPGLNGFSGGFGFNPSSQMGMARLAMLAGNSS 581
Query: 531 --VRPLMPVGSVTSAATVHSELHDAFTKTKNGIVQSISMNEIEAGNMKSPENLKATNSEI 358
P +G V++++++ A + +S N + N+ +P +L ++
Sbjct: 582 TESMPSQKLGMVSNSSSIPIHPMQANYFASDRPESPVSSNTPRSRNLAAPGSLMKVHTPP 641
Query: 357 SFVVPNGEGFQQLSCQDYSQHQKLDSVPPDLNVRLQSP-------VXXXXXXXSDLALQL 199
++ +Q L +PPDLNVR Q+P DLALQL
Sbjct: 642 EVLIGGKASWQGLP----------QRIPPDLNVRFQAPGSPSSSTTPIASSQQPDLALQL 691
>emb|CAN74748.1| hypothetical protein VITISV_012026 [Vitis vinifera]
Length = 688
Score = 389 bits (999), Expect = e-105
Identities = 254/600 (42%), Positives = 334/600 (55%), Gaps = 33/600 (5%)
Frame = -2
Query: 1899 DTASGTEMESSSTTAMPDTNLLVFILDTLQKKDTYGVFSEPVDSKELPDYHDIVEHPMDF 1720
DT G+ +ES TT +PD LLVFILD LQKKDT+GVF EPVD +ELPDYHDI+EHPMDF
Sbjct: 150 DTPQGSRLESGPTTPLPDKKLLVFILDRLQKKDTHGVFLEPVDPEELPDYHDIIEHPMDF 209
Query: 1719 RTVREKLETGAYVKLEQFEKDVFLICSNAMRYNALDTIYFRQARSIEELAKKNFENVRQD 1540
TVR+KL+ G Y LEQFE D+FLICSNAM+YNA DT+YFRQAR+I+ELAK++F N+RQ+
Sbjct: 210 GTVRKKLDGGLYSNLEQFESDIFLICSNAMQYNAPDTVYFRQARTIQELAKRDFANLRQE 269
Query: 1539 SDDNELQQTIVKRGRPPTTNPKKRLGRPPIVRTGSDLSSGATLADAGENNI-----DLRR 1375
DD E Q IV+RGRPPT + KK LG P+ + SS ATLA G+N+I +LR+
Sbjct: 270 GDDGEPQPKIVRRGRPPTKHLKKSLGSSPLEHVAPETSSEATLATGGDNSISSNSYNLRK 329
Query: 1374 GSYE-KSGPSETSGRIDHRSCSNDSF-TWSSEHTSGGNDEFPASVVKGISVKFGKKLFVL 1201
G K P++ S + + S ++D++ +W SE N+EFPAS++KG+S K GKK F L
Sbjct: 330 GPTPCKFRPADISVKAQYGSRNSDNYSSWLSE----WNNEFPASILKGVSTKHGKKPFEL 385
Query: 1200 DESRRNTYKQSHLSGRSFPSVLATFRGEKKQLMAVGLHMEHGFARSLARFAASLGPVAWK 1021
DE+RR+TYK L+ PSVL T GE KQLM+VGLH +HG+ARSLARFAA LG WK
Sbjct: 386 DENRRDTYKHP-LASNHEPSVLTTLHGELKQLMSVGLHSDHGYARSLARFAADLGQDVWK 444
Query: 1020 IASKKIERALPTGVKFGPGWVGENESPLSESLLTIHTPAHLFSEQPFSVSKISSSATVRS 841
IA+KKI LP GV+FGPGWVGENE+ +++P
Sbjct: 445 IAAKKIANVLPVGVEFGPGWVGENEA---------------LAQRP-------------- 475
Query: 840 IPDVKVDKVSERQVPSNNSASDVYLNRISSPSTAASSL-VGNLSS-ELTTESVEATRPKL 667
+ E Q SNNS + P+T+ SSL V N SS ES EA R
Sbjct: 476 ------SLLCENQKSSNNSTPP---HPQPPPTTSGSSLFVANRSSLPCKEESGEAVRG-- 524
Query: 666 ESRDCLLSSNADGTMLNPPFQIHQGPVLNPSVNSFQ-----NLASQMDKV---------- 532
L+S + T P +IHQ ++P +N F N +SQM
Sbjct: 525 ------LNSQIELTSRPAPPEIHQTLGIHPGLNGFSGGFGFNPSSQMGMARLAMLAGNSS 578
Query: 531 --VRPLMPVGSVTSAATVHSELHDAFTKTKNGIVQSISMNEIEAGNMKSPENLKATNSEI 358
P +G V++++++ A + +S N + N+ P +L ++
Sbjct: 579 TESXPSQKLGMVSNSSSIPIHPMQANYFASDRPESPVSSNTPRSRNLAEPGSLMKVHTPP 638
Query: 357 SFVVPNGEGFQQLSCQDYSQHQKLDSVPPDLNVRLQSP-------VXXXXXXXSDLALQL 199
++ +Q L +PPDLNVR Q+P DLALQL
Sbjct: 639 EVLIGGKASWQGLP----------QRIPPDLNVRFQAPGSPSSSTTPIASSQQPDLALQL 688