BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007005
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274576.1| PREDICTED: protein Red isoform 1 [Vitis vini...   114   6e-40
ref|XP_002274638.2| PREDICTED: protein Red isoform 3 [Vitis vini...   114   6e-40
ref|XP_002516205.1| red protein, putative [Ricinus communis] gi|...   113   4e-39
gb|ABK25317.1| unknown [Picea sitchensis]                             108   7e-38
ref|NP_001105988.1| putative splicing factor [Zea mays] gi|13403...   103   1e-36

>ref|XP_002274576.1| PREDICTED: protein Red isoform 1 [Vitis vinifera]
           gi|297738505|emb|CBI27750.3| unnamed protein product
           [Vitis vinifera]
          Length = 566

 Score =  114 bits (286), Expect(2) = 6e-40
 Identities = 55/66 (83%), Positives = 61/66 (92%)
 Frame = -1

Query: 495 KISIENKKYLGGDVEHTHLVKGLDFALLHKVRSEIDKKPDVGDEADGKLRVSKEDQALTF 316
           KISIE+ KYLGGDVEHTHLVKGLD+ALLHKVRSEI+KKP+VGD+ADGK RVS EDQ L+F
Sbjct: 69  KISIEHSKYLGGDVEHTHLVKGLDYALLHKVRSEIEKKPEVGDDADGKSRVSNEDQPLSF 128

Query: 315 RTETAK 298
           RT TAK
Sbjct: 129 RTATAK 134



 Score = 76.3 bits (186), Expect(2) = 6e-40
 Identities = 35/40 (87%), Positives = 36/40 (90%)
 Frame = -3

Query: 616 YRDRAKERREDQNPDHEPTELGSFHAVAPPGNVGLRLADA 497
           YRDRAKERREDQNPD+EPTELGSFHAVAPPG V LR  DA
Sbjct: 28  YRDRAKERREDQNPDYEPTELGSFHAVAPPGTVDLRSTDA 67


>ref|XP_002274638.2| PREDICTED: protein Red isoform 3 [Vitis vinifera]
          Length = 536

 Score =  114 bits (286), Expect(2) = 6e-40
 Identities = 55/66 (83%), Positives = 61/66 (92%)
 Frame = -1

Query: 495 KISIENKKYLGGDVEHTHLVKGLDFALLHKVRSEIDKKPDVGDEADGKLRVSKEDQALTF 316
           KISIE+ KYLGGDVEHTHLVKGLD+ALLHKVRSEI+KKP+VGD+ADGK RVS EDQ L+F
Sbjct: 69  KISIEHSKYLGGDVEHTHLVKGLDYALLHKVRSEIEKKPEVGDDADGKSRVSNEDQPLSF 128

Query: 315 RTETAK 298
           RT TAK
Sbjct: 129 RTATAK 134



 Score = 76.3 bits (186), Expect(2) = 6e-40
 Identities = 35/40 (87%), Positives = 36/40 (90%)
 Frame = -3

Query: 616 YRDRAKERREDQNPDHEPTELGSFHAVAPPGNVGLRLADA 497
           YRDRAKERREDQNPD+EPTELGSFHAVAPPG V LR  DA
Sbjct: 28  YRDRAKERREDQNPDYEPTELGSFHAVAPPGTVDLRSTDA 67


>ref|XP_002516205.1| red protein, putative [Ricinus communis]
           gi|223544691|gb|EEF46207.1| red protein, putative
           [Ricinus communis]
          Length = 567

 Score =  113 bits (282), Expect(2) = 4e-39
 Identities = 64/111 (57%), Positives = 76/111 (68%), Gaps = 8/111 (7%)
 Frame = -1

Query: 495 KISIENKKYLGGDVEHTHLVKGLDFALLHKVRSEIDKKPDVGDEADGKLRVSKEDQALTF 316
           KISIE  KYLGGDVEHTHLVKGLD+ALL+KVRSEIDKKPD GD+ADGK R SKEDQ L+F
Sbjct: 69  KISIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIDKKPDAGDDADGKSRKSKEDQQLSF 128

Query: 315 RTETAK-VESAISQVQEVG-------TGVLEFSKNVNQGFNRLVLPILQKS 187
           RT TAK V  +I + Q +         G + F  N+  G+   +   L +S
Sbjct: 129 RTATAKSVYQSIVKPQAIMKTNEMFLPGRMSFIFNMEGGYTHDIPTTLHRS 179



 Score = 75.1 bits (183), Expect(2) = 4e-39
 Identities = 35/40 (87%), Positives = 36/40 (90%)
 Frame = -3

Query: 616 YRDRAKERREDQNPDHEPTELGSFHAVAPPGNVGLRLADA 497
           YRDRAKERREDQNPD+EPTELGSFHAVAPPG V  R ADA
Sbjct: 28  YRDRAKERREDQNPDYEPTELGSFHAVAPPGAVDTRSADA 67


>gb|ABK25317.1| unknown [Picea sitchensis]
          Length = 660

 Score =  108 bits (271), Expect(2) = 7e-38
 Identities = 53/67 (79%), Positives = 59/67 (88%)
 Frame = -1

Query: 495 KISIENKKYLGGDVEHTHLVKGLDFALLHKVRSEIDKKPDVGDEADGKLRVSKEDQALTF 316
           +ISIEN KYLGGDVEHTHLVKGLD+ALLHKVRSEIDKKP+  D ADGK RV KEDQ ++F
Sbjct: 149 RISIENSKYLGGDVEHTHLVKGLDYALLHKVRSEIDKKPENEDIADGKSRVQKEDQPVSF 208

Query: 315 RTETAKV 295
           RT TAK+
Sbjct: 209 RTATAKL 215



 Score = 75.1 bits (183), Expect(2) = 7e-38
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = -3

Query: 616 YRDRAKERREDQNPDHEPTELGSFHAVAPPGNVGLRLADA 497
           YRDRAKERREDQNPD+EPT++GS HAVAPPG V LR+ADA
Sbjct: 108 YRDRAKERREDQNPDYEPTDMGSLHAVAPPGTVDLRIADA 147


>ref|NP_001105988.1| putative splicing factor [Zea mays] gi|134035227|gb|ABO47657.1|
           putative splicing factor [Zea mays]
           gi|134035229|gb|ABO47658.1| putative splicing factor
           [Zea mays]
          Length = 565

 Score =  103 bits (258), Expect(2) = 1e-36
 Identities = 57/111 (51%), Positives = 72/111 (64%), Gaps = 8/111 (7%)
 Frame = -1

Query: 495 KISIENKKYLGGDVEHTHLVKGLDFALLHKVRSEIDKKPDVGDEADGKLRVSKEDQALTF 316
           KISIE  KYLGGD+EHTHLVKGLD+ALLHKVRSEI+KKP+  D  D K R +KEDQA++F
Sbjct: 68  KISIEKSKYLGGDLEHTHLVKGLDYALLHKVRSEIEKKPEAEDGKDTKSRAAKEDQAVSF 127

Query: 315 RTETA--------KVESAISQVQEVGTGVLEFSKNVNQGFNRLVLPILQKS 187
           RT TA        K +S I + +    G + F  N+ +G    +   L +S
Sbjct: 128 RTATAKSVYQWIIKPQSIIKENELFLPGRMSFIYNMEEGVTNDIPTTLHRS 178



 Score = 76.3 bits (186), Expect(2) = 1e-36
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = -3

Query: 616 YRDRAKERREDQNPDHEPTELGSFHAVAPPGNVGLRLADA 497
           YRDRAKERREDQNPD+EPTELGSFHAVAPPGN  LRLADA
Sbjct: 28  YRDRAKERREDQNPDYEPTELGSFHAVAPPGN-DLRLADA 66