BLASTX nr result

ID: Coptis24_contig00006968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006968
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger d...    88   6e-16
gb|AAD02556.1| PGPD14 [Petunia x hybrida]                              86   4e-15
ref|XP_002326381.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_004166307.1| PREDICTED: RING finger and CHY zinc finger d...    85   7e-15
ref|XP_004145767.1| PREDICTED: RING finger and CHY zinc finger d...    85   7e-15

>ref|XP_002268193.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1 isoform 2 [Vitis vinifera]
           gi|225441159|ref|XP_002268149.1| PREDICTED: RING finger
           and CHY zinc finger domain-containing protein 1 isoform
           1 [Vitis vinifera] gi|297739980|emb|CBI30162.3| unnamed
           protein product [Vitis vinifera]
          Length = 289

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = +2

Query: 89  YERDENLIKEPRSENFGCAHYKRKCKIRAPCCDEIFDCRHCHNEAKNSMEV 241
           +E DE+L+ E  S  FGC+HY+R+CKIRAPCCDEIFDCRHCHNEAKN++EV
Sbjct: 14  HEEDESLM-EMGSGRFGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKNALEV 63


>gb|AAD02556.1| PGPD14 [Petunia x hybrida]
          Length = 285

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 36/56 (64%), Positives = 46/56 (82%)
 Frame = +2

Query: 74  EICLSYERDENLIKEPRSENFGCAHYKRKCKIRAPCCDEIFDCRHCHNEAKNSMEV 241
           +I  S   DE+ I +  S N+GC+HY+R+CKIRAPCCDEIFDCRHCHN++KNS+EV
Sbjct: 5   QISHSLSNDES-ITDMGSGNYGCSHYRRRCKIRAPCCDEIFDCRHCHNDSKNSLEV 59


>ref|XP_002326381.1| predicted protein [Populus trichocarpa] gi|222833574|gb|EEE72051.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 33/37 (89%), Positives = 36/37 (97%)
 Frame = +2

Query: 131 NFGCAHYKRKCKIRAPCCDEIFDCRHCHNEAKNSMEV 241
           NFGC HY+R+CKIRAPCCDEIFDCRHCHNE+KNSMEV
Sbjct: 18  NFGCTHYRRRCKIRAPCCDEIFDCRHCHNESKNSMEV 54


>ref|XP_004166307.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1-like [Cucumis sativus]
          Length = 303

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = +2

Query: 125 SENFGCAHYKRKCKIRAPCCDEIFDCRHCHNEAKNSMEV 241
           S NFGC HY+R+CKIRAPCCDEIFDCRHCHNEAKNS+E+
Sbjct: 36  SGNFGCLHYRRRCKIRAPCCDEIFDCRHCHNEAKNSLEL 74


>ref|XP_004145767.1| PREDICTED: RING finger and CHY zinc finger domain-containing
           protein 1-like [Cucumis sativus]
          Length = 303

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = +2

Query: 125 SENFGCAHYKRKCKIRAPCCDEIFDCRHCHNEAKNSMEV 241
           S NFGC HY+R+CKIRAPCCDEIFDCRHCHNEAKNS+E+
Sbjct: 36  SGNFGCLHYRRRCKIRAPCCDEIFDCRHCHNEAKNSLEL 74


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