BLASTX nr result

ID: Coptis24_contig00006964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006964
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ11413.1| hypothetical protein OsJ_01274 [Oryza sativa Japo...   107   1e-42
ref|NP_001042722.1| Os01g0275600 [Oryza sativa Japonica Group] g...   107   1e-42
tpg|DAA54152.1| TPA: hypothetical protein ZEAMMB73_671369 [Zea m...   102   5e-42
ref|NP_001136873.1| uncharacterized protein LOC100217027 [Zea ma...   102   5e-42
ref|XP_002310956.1| argonaute protein group [Populus trichocarpa...   107   2e-41

>gb|EAZ11413.1| hypothetical protein OsJ_01274 [Oryza sativa Japonica Group]
          Length = 997

 Score =  107 bits (267), Expect(2) = 1e-42
 Identities = 49/54 (90%), Positives = 52/54 (96%)
 Frame = -1

Query: 725  HNDFYMCAHAGMIGTTRPVHYHVLFDEIGFSADDLQELVHSLSYVYQRSSTAIS 564
            +NDFYMCAHAGMIGTTRP HYH+L DEIGFSADDLQELVHSLSYVYQRS+TAIS
Sbjct: 885  NNDFYMCAHAGMIGTTRPTHYHILHDEIGFSADDLQELVHSLSYVYQRSTTAIS 938



 Score = 92.0 bits (227), Expect(2) = 1e-42
 Identities = 44/57 (77%), Positives = 47/57 (82%)
 Frame = -3

Query: 498  APIFYAHLAAAQVGKFMKFDEMSETSSGHAGVTSAGSVPVPALPRLHENVSSSMYFC 328
            API YAHLAAAQV +F+KFDEMSETSS H G TSAGS PVP LPRLH  V SSM+FC
Sbjct: 941  APICYAHLAAAQVSQFIKFDEMSETSSSHGGHTSAGSAPVPELPRLHNKVRSSMFFC 997


>ref|NP_001042722.1| Os01g0275600 [Oryza sativa Japonica Group]
           gi|75203337|sp|Q9SDG8.1|AGO4A_ORYSJ RecName:
           Full=Protein argonaute 4A; Short=OsAGO4a
           gi|6539559|dbj|BAA88176.1| putative zwille protein
           [Oryza sativa Japonica Group]
           gi|113532253|dbj|BAF04636.1| Os01g0275600 [Oryza sativa
           Japonica Group]
          Length = 904

 Score =  107 bits (267), Expect(2) = 1e-42
 Identities = 49/54 (90%), Positives = 52/54 (96%)
 Frame = -1

Query: 725 HNDFYMCAHAGMIGTTRPVHYHVLFDEIGFSADDLQELVHSLSYVYQRSSTAIS 564
           +NDFYMCAHAGMIGTTRP HYH+L DEIGFSADDLQELVHSLSYVYQRS+TAIS
Sbjct: 792 NNDFYMCAHAGMIGTTRPTHYHILHDEIGFSADDLQELVHSLSYVYQRSTTAIS 845



 Score = 92.0 bits (227), Expect(2) = 1e-42
 Identities = 44/57 (77%), Positives = 47/57 (82%)
 Frame = -3

Query: 498  APIFYAHLAAAQVGKFMKFDEMSETSSGHAGVTSAGSVPVPALPRLHENVSSSMYFC 328
            API YAHLAAAQV +F+KFDEMSETSS H G TSAGS PVP LPRLH  V SSM+FC
Sbjct: 848  APICYAHLAAAQVSQFIKFDEMSETSSSHGGHTSAGSAPVPELPRLHNKVRSSMFFC 904


>tpg|DAA54152.1| TPA: hypothetical protein ZEAMMB73_671369 [Zea mays]
          Length = 471

 Score =  102 bits (255), Expect(2) = 5e-42
 Identities = 47/52 (90%), Positives = 49/52 (94%)
 Frame = -1

Query: 719 DFYMCAHAGMIGTTRPVHYHVLFDEIGFSADDLQELVHSLSYVYQRSSTAIS 564
           DFYMCAHAGMIGTTRP HYH+L DEIGFS DDLQELVHSLSYVYQRS+TAIS
Sbjct: 361 DFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAIS 412



 Score = 94.7 bits (234), Expect(2) = 5e-42
 Identities = 46/57 (80%), Positives = 49/57 (85%)
 Frame = -3

Query: 498 APIFYAHLAAAQVGKFMKFDEMSETSSGHAGVTSAGSVPVPALPRLHENVSSSMYFC 328
           API YAHLAAAQVG+F+KFDEMSETSS H G TSAGSVPV  LPRLHE V SSM+FC
Sbjct: 415 APICYAHLAAAQVGQFIKFDEMSETSSSHGGHTSAGSVPVQELPRLHEKVRSSMFFC 471


>ref|NP_001136873.1| uncharacterized protein LOC100217027 [Zea mays]
           gi|194697434|gb|ACF82801.1| unknown [Zea mays]
          Length = 391

 Score =  102 bits (255), Expect(2) = 5e-42
 Identities = 47/52 (90%), Positives = 49/52 (94%)
 Frame = -1

Query: 719 DFYMCAHAGMIGTTRPVHYHVLFDEIGFSADDLQELVHSLSYVYQRSSTAIS 564
           DFYMCAHAGMIGTTRP HYH+L DEIGFS DDLQELVHSLSYVYQRS+TAIS
Sbjct: 281 DFYMCAHAGMIGTTRPTHYHILHDEIGFSPDDLQELVHSLSYVYQRSTTAIS 332



 Score = 94.7 bits (234), Expect(2) = 5e-42
 Identities = 46/57 (80%), Positives = 49/57 (85%)
 Frame = -3

Query: 498 APIFYAHLAAAQVGKFMKFDEMSETSSGHAGVTSAGSVPVPALPRLHENVSSSMYFC 328
           API YAHLAAAQVG+F+KFDEMSETSS H G TSAGSVPV  LPRLHE V SSM+FC
Sbjct: 335 APICYAHLAAAQVGQFIKFDEMSETSSSHGGHTSAGSVPVQELPRLHEKVRSSMFFC 391


>ref|XP_002310956.1| argonaute protein group [Populus trichocarpa]
           gi|222850776|gb|EEE88323.1| argonaute protein group
           [Populus trichocarpa]
          Length = 923

 Score =  107 bits (266), Expect(2) = 2e-41
 Identities = 49/54 (90%), Positives = 52/54 (96%)
 Frame = -1

Query: 725 HNDFYMCAHAGMIGTTRPVHYHVLFDEIGFSADDLQELVHSLSYVYQRSSTAIS 564
           +NDFYMCAHAGMIGTTRP HYHVL DE+GFSADDLQELVHSLSYVYQRS+TAIS
Sbjct: 811 NNDFYMCAHAGMIGTTRPTHYHVLHDELGFSADDLQELVHSLSYVYQRSTTAIS 864



 Score = 88.6 bits (218), Expect(2) = 2e-41
 Identities = 40/57 (70%), Positives = 49/57 (85%)
 Frame = -3

Query: 498  APIFYAHLAAAQVGKFMKFDEMSETSSGHAGVTSAGSVPVPALPRLHENVSSSMYFC 328
            API YAHLAA+Q+ +F+KFD++S+TSS H GVT  G+VPVP LPRLH NVSSSM+FC
Sbjct: 867  APICYAHLAASQMTQFIKFDDLSDTSSSHGGVTVPGAVPVPELPRLHNNVSSSMFFC 923


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