BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006913
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284493.1| PREDICTED: chlorophyll a-b binding protein 1...   494   e-137
ref|XP_003634999.1| PREDICTED: chlorophyll a-b binding protein 1...   491   e-137
ref|XP_002274150.2| PREDICTED: chlorophyll a-b binding protein 1...   490   e-136
gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding ...   490   e-136
ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 1...   489   e-136

>ref|XP_002284493.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
           [Vitis vinifera]
          Length = 266

 Score =  494 bits (1273), Expect = e-137
 Identities = 235/255 (92%), Positives = 246/255 (96%)
 Frame = -2

Query: 962 VLRPSQFLGQVRSANANSLRNVVAMGTGKFSMSNDLWYGPDRVKYLGPFSAQTPSYLNGE 783
           VLRP+ FLGQ R AN+N LR+VV MGTGK++M N+LWYGPDRVKYLGPFSAQTPSYL GE
Sbjct: 12  VLRPTPFLGQTRGANSNPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGE 71

Query: 782 FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWF 603
           FPGDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGALGCITPEVLEKW++VDFKEP+WF
Sbjct: 72  FPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWF 131

Query: 602 KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLEGVGDGNNLYPG 423
           KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GVGDGNNLYPG
Sbjct: 132 KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPG 191

Query: 422 GTYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDSPV 243
           G YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PV
Sbjct: 192 GQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPV 251

Query: 242 ANNAWVYATKFVPGS 198
           ANNAWVYATKFVPGS
Sbjct: 252 ANNAWVYATKFVPGS 266


>ref|XP_003634999.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
           [Vitis vinifera]
          Length = 269

 Score =  491 bits (1265), Expect = e-137
 Identities = 234/254 (92%), Positives = 243/254 (95%)
 Frame = -2

Query: 959 LRPSQFLGQVRSANANSLRNVVAMGTGKFSMSNDLWYGPDRVKYLGPFSAQTPSYLNGEF 780
           LRP+QFLGQ R +NAN LR VV MGTGKF+M N+LWYGPDRVKYLGPFSAQTPSYL GEF
Sbjct: 16  LRPTQFLGQTRGSNANQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEF 75

Query: 779 PGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFK 600
           PGDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGA GCITPEVLEKWVKVDFKEPVWFK
Sbjct: 76  PGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFK 135

Query: 599 AGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLEGVGDGNNLYPGG 420
           AGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEG+RINGL GVG+GN+LYPGG
Sbjct: 136 AGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGG 195

Query: 419 TYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDSPVA 240
            YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVA
Sbjct: 196 PYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVA 255

Query: 239 NNAWVYATKFVPGS 198
           NNAW YATKFVPGS
Sbjct: 256 NNAWAYATKFVPGS 269


>ref|XP_002274150.2| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
           [Vitis vinifera] gi|147801944|emb|CAN77327.1|
           hypothetical protein VITISV_001096 [Vitis vinifera]
          Length = 269

 Score =  490 bits (1262), Expect = e-136
 Identities = 233/254 (91%), Positives = 243/254 (95%)
 Frame = -2

Query: 959 LRPSQFLGQVRSANANSLRNVVAMGTGKFSMSNDLWYGPDRVKYLGPFSAQTPSYLNGEF 780
           LRP+QF+GQ R +NAN LR VV MGTGKF+M N+LWYGPDRVKYLGPFSAQTPSYL GEF
Sbjct: 16  LRPTQFVGQTRGSNANQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEF 75

Query: 779 PGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFK 600
           PGDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGA GCITPEVLEKWVKVDFKEPVWFK
Sbjct: 76  PGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFK 135

Query: 599 AGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLEGVGDGNNLYPGG 420
           AGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEG+RINGL GVG+GN+LYPGG
Sbjct: 136 AGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGG 195

Query: 419 TYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDSPVA 240
            YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVA
Sbjct: 196 PYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVA 255

Query: 239 NNAWVYATKFVPGS 198
           NNAW YATKFVPGS
Sbjct: 256 NNAWAYATKFVPGS 269


>gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding protein [Vigna radiata]
          Length = 269

 Score =  490 bits (1261), Expect = e-136
 Identities = 232/255 (90%), Positives = 247/255 (96%)
 Frame = -2

Query: 962 VLRPSQFLGQVRSANANSLRNVVAMGTGKFSMSNDLWYGPDRVKYLGPFSAQTPSYLNGE 783
           VL+P+ FLGQ +++N N LR+VV+MG+GK+SMSN+LWYGPDRVKYLGPFSAQTPSYL GE
Sbjct: 15  VLKPTPFLGQGKASNGNPLRDVVSMGSGKYSMSNELWYGPDRVKYLGPFSAQTPSYLKGE 74

Query: 782 FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWF 603
           FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW++VDFKEPVWF
Sbjct: 75  FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWF 134

Query: 602 KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLEGVGDGNNLYPG 423
           KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL+GVG+GNNLYPG
Sbjct: 135 KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPG 194

Query: 422 GTYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDSPV 243
           G YFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PV
Sbjct: 195 GQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPV 254

Query: 242 ANNAWVYATKFVPGS 198
           ANNAWVYATKF PGS
Sbjct: 255 ANNAWVYATKFAPGS 269


>ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
           [Cucumis sativus] gi|449532805|ref|XP_004173369.1|
           PREDICTED: chlorophyll a-b binding protein 13,
           chloroplastic-like [Cucumis sativus]
          Length = 264

 Score =  489 bits (1259), Expect = e-136
 Identities = 233/255 (91%), Positives = 246/255 (96%)
 Frame = -2

Query: 962 VLRPSQFLGQVRSANANSLRNVVAMGTGKFSMSNDLWYGPDRVKYLGPFSAQTPSYLNGE 783
           +LR + FLGQ R++  N LR+VVAMGTGK++MSNDLWYGPDRVKYLGPFSAQTPSYLNGE
Sbjct: 10  LLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGE 69

Query: 782 FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWF 603
           FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW+KVDFKEPVWF
Sbjct: 70  FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWF 129

Query: 602 KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLEGVGDGNNLYPG 423
           KAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL+GVG+GN+LYPG
Sbjct: 130 KAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPG 189

Query: 422 GTYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDSPV 243
           G YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD PV
Sbjct: 190 GQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPV 249

Query: 242 ANNAWVYATKFVPGS 198
           ANNAWVYATKF PGS
Sbjct: 250 ANNAWVYATKFAPGS 264