BLASTX nr result

ID: Coptis24_contig00006905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006905
         (1570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|2...   644   0.0  
ref|XP_004136584.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   607   e-171
ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   607   e-171
ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   603   e-170
ref|XP_002878172.1| hypothetical protein ARALYDRAFT_324272 [Arab...   597   e-168

>ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|222867323|gb|EEF04454.1|
            predicted protein [Populus trichocarpa]
          Length = 445

 Score =  644 bits (1661), Expect = 0.0
 Identities = 307/433 (70%), Positives = 355/433 (81%), Gaps = 3/433 (0%)
 Frame = -3

Query: 1451 TTFSVTDYHAIGDGTTYDTSHIQAAIDACSAAG---GGNVKFPAGKDYLTATIYLKSGVT 1281
            TT SVTD+ AIGDG  YDT  IQ+ I++C         +V FP G  YLTATI+LKS V 
Sbjct: 11   TTLSVTDFGAIGDGIHYDTEAIQSTINSCPTTPPTKACHVNFPPGI-YLTATIHLKSNVV 69

Query: 1280 LEIEKGARILSGPRLVDYPVESKRWYVVLAENXXXXXXXXXXXXXXXGLKFVEKLDEKKN 1101
            L I++GA +L G +L DYP E  RWYVVLAEN               GLKFV++ +E+KN
Sbjct: 70   LNIQEGATLLGGTKLEDYPKEFNRWYVVLAENASDVGITGGGVVDGQGLKFVKRFNERKN 129

Query: 1100 VMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQPAYWCLHIVRCDNTLIDKVSIY 921
            VMVSWNS+GAC GDECRPRLVGF+ C NVKV NV L++PAYWCLHIV+C NT I  VSIY
Sbjct: 130  VMVSWNSTGACLGDECRPRLVGFIGCTNVKVWNVRLSEPAYWCLHIVQCLNTHISDVSIY 189

Query: 920  GDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYTGPLYNLTAKDCWIRTKSSAIK 741
            GDFN+PNNDGIDIEDSNNT+ITRC IDTGDDAICPKTYTGP+YNLTA DCWIRTKSSAIK
Sbjct: 190  GDFNSPNNDGIDIEDSNNTLITRCHIDTGDDAICPKTYTGPIYNLTATDCWIRTKSSAIK 249

Query: 740  LGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDVTFSNINVSTRYYDPSWWGRAE 561
            LGSA+W++FKGLVFDNITIVDSHRGL  Q+RDGGN +D+TFSNIN+STRYYDPSWWGRAE
Sbjct: 250  LGSASWFEFKGLVFDNITIVDSHRGLGLQIRDGGNVSDITFSNINISTRYYDPSWWGRAE 309

Query: 560  PIYVTTCRRHSNSNAGSISNILFVNITSDSENGVFLSGCKGGLLSNLKFINVNFNYRRWT 381
            PIYVTTC RHS+S  GSISN+ F+NIT++SENGVFLSG KGGLLSNL+FIN+N  +RRWT
Sbjct: 310  PIYVTTCPRHSSSKEGSISNLQFINITTNSENGVFLSGSKGGLLSNLRFINMNLTFRRWT 369

Query: 380  HFADGMVDYRPGCRGLVNHSMAGIVMENIEGLEVKNVNMKWSDKQLKGWNNPLDFNPSTV 201
             +  G+VDYRPGC+GLVNHS AGI+ME+IEG EV+NVNM+WSD Q + W+NPLDF PSTV
Sbjct: 370  TYPGGLVDYRPGCQGLVNHSAAGIIMEHIEGFEVENVNMRWSDYQNEPWDNPLDFRPSTV 429

Query: 200  NNISLLSFHSGIY 162
            NNIS L+FHS +Y
Sbjct: 430  NNISFLNFHSALY 442


>ref|XP_004136584.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis sativus]
          Length = 463

 Score =  607 bits (1565), Expect = e-171
 Identities = 289/449 (64%), Positives = 349/449 (77%), Gaps = 1/449 (0%)
 Frame = -3

Query: 1511 FFSIFTSFQSNPATSLNLHSTTFSVTDYHAIGDGTTYDTSHIQAAIDACSAAGGGNVKFP 1332
            F  I  S  + P+  L   ST+FSVTD+ AIGDG  YDT+ IQ+AI++C A     V FP
Sbjct: 12   FLLIIHSHSAIPSIRLLRRSTSFSVTDFGAIGDGLHYDTTAIQSAINSCPAPSRCYVTFP 71

Query: 1331 AGKDYLTATIYLKSGVTLEIEKGARILSGPRLVDYPVESKRWYVVLAENXXXXXXXXXXX 1152
             G  YLTATI+L+SGV L+I+ GA +L+G ++ DYP +S RW+ V+AEN           
Sbjct: 72   PGT-YLTATIWLRSGVVLDIQPGATVLAGTKMEDYPADSSRWFAVVAENASDVGISGGGT 130

Query: 1151 XXXXGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQPAYWC 972
                GLKFVEK D++KNVMVSWN +GACYGDECRP LVGF+    V+V NV+  QPA+WC
Sbjct: 131  VDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNKVRVSNVSFNQPAHWC 190

Query: 971  LHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYTGPLY 792
            LH+VRC+NT+I+ VSIYGDF+TPNNDGIDIEDSNNT+ITRC IDTGDDAICPK+  GP++
Sbjct: 191  LHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSSNGPVF 250

Query: 791  NLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDVTFSN 612
            NLTA +CWIRTKSSAIKLGSA+W++F  ++FDN+TIVDSHRGLAFQLRDGG+A D+TFSN
Sbjct: 251  NLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTIVDSHRGLAFQLRDGGSANDITFSN 310

Query: 611  INVSTRYYDPSWWGRAEPIYVTTCRRHSNSNAGSISNILFVNITSDSENGVFLSGCKGGL 432
            IN++TRYYDPSWWGRAEPIYVTTC R   S  GSISNI F NIT+ SENGVFLSG K G+
Sbjct: 311  INITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNIRFTNITATSENGVFLSGSKSGV 370

Query: 431  LSNLKFINVNFNYRRWTHFADGMVDYRPGCRGLVNHSMAGIVMENIEGLEVKNVNMKWSD 252
            LSNL+F NV   Y+RWT +  G+ DYRPGC+G V H MAG++ME+IEGL ++NV+M W D
Sbjct: 371  LSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVDMHWFD 430

Query: 251  KQ-LKGWNNPLDFNPSTVNNISLLSFHSG 168
                  WNNPLDF PSTVNNIS L+FHSG
Sbjct: 431  TNGSLQWNNPLDFRPSTVNNISFLNFHSG 459


>ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis sativus]
          Length = 463

 Score =  607 bits (1564), Expect = e-171
 Identities = 288/449 (64%), Positives = 349/449 (77%), Gaps = 1/449 (0%)
 Frame = -3

Query: 1511 FFSIFTSFQSNPATSLNLHSTTFSVTDYHAIGDGTTYDTSHIQAAIDACSAAGGGNVKFP 1332
            F  I  S  + P+  L   ST+FSVTD+ AIGDG  YDT+ IQ+AI++C A     V FP
Sbjct: 12   FLLIIHSHSAIPSIRLLRRSTSFSVTDFGAIGDGLHYDTTAIQSAINSCPAPSRCYVTFP 71

Query: 1331 AGKDYLTATIYLKSGVTLEIEKGARILSGPRLVDYPVESKRWYVVLAENXXXXXXXXXXX 1152
             G  YLTATI+L+SGV L+I+ GA +L+G ++ DYP +S RW+ V+AEN           
Sbjct: 72   PGT-YLTATIWLRSGVVLDIQPGATVLAGTKMEDYPADSSRWFAVVAENASDVGISGGGT 130

Query: 1151 XXXXGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQPAYWC 972
                GLKFVEK D++KNVMVSWN +GACYGDECRP LVGF+    V+V NV+  QPA+WC
Sbjct: 131  VDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNKVRVSNVSFNQPAHWC 190

Query: 971  LHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYTGPLY 792
            LH+VRC+NT+I+ VSIYGDF+TPNNDGIDIEDSNNT+ITRC IDTGDDAICPK+  GP++
Sbjct: 191  LHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSSNGPVF 250

Query: 791  NLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDVTFSN 612
            NLTA +CWIRTKSSAIKLGSA+W++F  ++FDN+TIVDSHRGLAFQLRDGG+A D+TFSN
Sbjct: 251  NLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTIVDSHRGLAFQLRDGGSANDITFSN 310

Query: 611  INVSTRYYDPSWWGRAEPIYVTTCRRHSNSNAGSISNILFVNITSDSENGVFLSGCKGGL 432
            IN++TRYYDPSWWGRAEPIYVTTC R   S  GSISNI F+NIT+ SENGVFLSG K G+
Sbjct: 311  INITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNIRFINITATSENGVFLSGSKSGV 370

Query: 431  LSNLKFINVNFNYRRWTHFADGMVDYRPGCRGLVNHSMAGIVMENIEGLEVKNVNMKWSD 252
            LSNL+F NV   Y+RWT +  G+ DYRPGC+G V H MAG++ME+IEGL ++NV+M W D
Sbjct: 371  LSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVDMHWFD 430

Query: 251  KQ-LKGWNNPLDFNPSTVNNISLLSFHSG 168
                  WNNPLDF PSTVNNIS  +FHSG
Sbjct: 431  TNGSLQWNNPLDFRPSTVNNISFFNFHSG 459


>ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Glycine max]
          Length = 466

 Score =  603 bits (1555), Expect = e-170
 Identities = 289/448 (64%), Positives = 346/448 (77%), Gaps = 5/448 (1%)
 Frame = -3

Query: 1490 FQSNP---ATS--LNLHSTTFSVTDYHAIGDGTTYDTSHIQAAIDACSAAGGGNVKFPAG 1326
            F  NP   ATS  LN    T SV D+ A GDG  YDT  IQ+AI++C      +V FPA 
Sbjct: 12   FLLNPSLLATSHPLNPIPVTLSVADFGAAGDGLRYDTEAIQSAINSCPEGDPCHVTFPAP 71

Query: 1325 KDYLTATIYLKSGVTLEIEKGARILSGPRLVDYPVESKRWYVVLAENXXXXXXXXXXXXX 1146
              YLTAT++LKSGV L +E GA IL G RL DYP ES RWYVV+AEN             
Sbjct: 72   GKYLTATVFLKSGVVLNVESGATILGGTRLEDYPEESWRWYVVVAENATDVGIRGGGAVD 131

Query: 1145 XXGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLNVNLTQPAYWCLH 966
                KFV + D +KNVMVSWN +GAC GDECRPRL+GFL+C NV+V N+ L QPAYWCLH
Sbjct: 132  GQAAKFVVREDPRKNVMVSWNQTGACLGDECRPRLIGFLDCNNVQVSNITLNQPAYWCLH 191

Query: 965  IVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAICPKTYTGPLYNL 786
            +VR +N  I  ++IYGDFN PNNDGIDIEDSNNTVITRC IDTGDDAICPK+ TGP+YNL
Sbjct: 192  LVRSNNICIQDIAIYGDFNIPNNDGIDIEDSNNTVITRCHIDTGDDAICPKSSTGPVYNL 251

Query: 785  TAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDGGNATDVTFSNIN 606
            T  DCWIR+KSSAIKLGSA+W+DFK  VFDNI IVDSHRG+ FQ+RDGGN +D+ FSN+N
Sbjct: 252  TVTDCWIRSKSSAIKLGSASWFDFKHFVFDNIAIVDSHRGIGFQIRDGGNVSDIVFSNMN 311

Query: 605  VSTRYYDPSWWGRAEPIYVTTCRRHSNSNAGSISNILFVNITSDSENGVFLSGCKGGLLS 426
            +STRYYD  WWGRAEPIYVT+C R S+S   SISN+LF+NIT++SENG+FLSG K GLL 
Sbjct: 312  ISTRYYDSLWWGRAEPIYVTSCPRDSSSKEASISNVLFINITANSENGIFLSGSKRGLLR 371

Query: 425  NLKFINVNFNYRRWTHFADGMVDYRPGCRGLVNHSMAGIVMENIEGLEVKNVNMKWSDKQ 246
            NL+FI+++  YRR+T++A G++DYRPGC+ LV H  AGI+ME+IEGLEVKNV M+WS+ Q
Sbjct: 372  NLRFIDMDITYRRFTNYAGGLLDYRPGCQELVKHRTAGIMMEHIEGLEVKNVEMRWSNDQ 431

Query: 245  LKGWNNPLDFNPSTVNNISLLSFHSGIY 162
            L+ WNNPL+F PSTVNNIS L+F+SG+Y
Sbjct: 432  LEQWNNPLEFRPSTVNNISFLNFNSGLY 459


>ref|XP_002878172.1| hypothetical protein ARALYDRAFT_324272 [Arabidopsis lyrata subsp.
            lyrata] gi|297324010|gb|EFH54431.1| hypothetical protein
            ARALYDRAFT_324272 [Arabidopsis lyrata subsp. lyrata]
          Length = 589

 Score =  597 bits (1538), Expect = e-168
 Identities = 292/456 (64%), Positives = 350/456 (76%), Gaps = 10/456 (2%)
 Frame = -3

Query: 1514 LFFSIFTSFQSNPATSLNL--HSTTFSVTDYHAIGDGTTYDTSHIQAAIDAC-----SAA 1356
            LFFS+  S      + + L   S   SVTD+ A GDG  YDTS +Q+ IDAC     S++
Sbjct: 9    LFFSLVQSRSYTSYSKIQLPGDSLALSVTDFGATGDGINYDTSAVQSTIDACNRHYTSSS 68

Query: 1355 GGGNVKFPAGKDYLTATIYLKSGVTLEIEKGARILSGPRLVDY-PVE-SKRWYVVLAENX 1182
                V FP+G +YLTA ++L+SGV L++ + A +L GPR+ DY P E S  WYVV+A N 
Sbjct: 69   SICRVTFPSG-NYLTAKLHLRSGVVLDVTENAVLLGGPRIEDYYPAETSSDWYVVVANNA 127

Query: 1181 XXXXXXXXXXXXXXGLKFVEKLDEKKNVMVSWNSSGACYGDECRPRLVGFLNCRNVKVLN 1002
                          G KFV + DEKKNVMVSWN +GAC GDECRPRLVGF++ RNV++ N
Sbjct: 128  TDVGITGGGAIDGQGSKFVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSRNVEIWN 187

Query: 1001 VNLTQPAYWCLHIVRCDNTLIDKVSIYGDFNTPNNDGIDIEDSNNTVITRCIIDTGDDAI 822
            + L +PAYWCLHIVRC+NT +  VSI GDFNTPNNDGIDIEDSNNTVITRC IDTGDDAI
Sbjct: 188  ITLREPAYWCLHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAI 247

Query: 821  CPKTYTGPLYNLTAKDCWIRTKSSAIKLGSATWYDFKGLVFDNITIVDSHRGLAFQLRDG 642
            CPKTYTGPLYNLTA DCWIRTKSSAIKLGSA+W+DFKGLVFDNITI +SHRGL  Q+RDG
Sbjct: 248  CPKTYTGPLYNLTATDCWIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQIRDG 307

Query: 641  GNATDVTFSNINVSTRYYDPSWWGRAEPIYVTTCRRHSNSNAGSISNILFVNITSDSENG 462
            GN +D+TFSNIN+STRYYDPSWWGRAEPIY+TTC R S++  GSISN+LFVNIT +SENG
Sbjct: 308  GNVSDITFSNINISTRYYDPSWWGRAEPIYITTCPRDSSAKEGSISNLLFVNITINSENG 367

Query: 461  VFLSGCKGGLLSNLKFINVNFNYRRWTHFADGMVDYRPGCRGLVNHS-MAGIVMENIEGL 285
            VFLSG   GLLS++KF N+N   RRW++++ G+VDYRPGCRGLVNHS  AGI+ME++ G 
Sbjct: 368  VFLSGSPNGLLSDIKFKNMNLTVRRWSNYSAGLVDYRPGCRGLVNHSATAGIIMEHVNGF 427

Query: 284  EVKNVNMKWSDKQLKGWNNPLDFNPSTVNNISLLSF 177
             ++NV++KWSD    GWN PL+F PSTVNN+SL  F
Sbjct: 428  SIENVDLKWSDDLNSGWNVPLEFRPSTVNNVSLFEF 463


Top