BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006872
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276418.2| PREDICTED: PHD finger protein ALFIN-LIKE 5 i...   357   3e-96
ref|XP_002514076.1| DNA binding protein, putative [Ricinus commu...   354   2e-95
ref|XP_003633111.1| PREDICTED: PHD finger protein ALFIN-LIKE 5-l...   354   2e-95
ref|NP_001237921.1| PHD1 [Glycine max] gi|115394660|gb|ABI97246....   354   2e-95
ref|XP_002280895.1| PREDICTED: PHD finger protein ALFIN-LIKE 5 [...   353   3e-95

>ref|XP_002276418.2| PREDICTED: PHD finger protein ALFIN-LIKE 5 isoform 2 [Vitis
           vinifera]
          Length = 252

 Score =  357 bits (916), Expect = 3e-96
 Identities = 176/253 (69%), Positives = 193/253 (76%)
 Frame = +3

Query: 21  MEGGAQYNARTVEEVFRDFKGRRVALIKALTTDSVDFFNQCDPEKDNLCLYGNPNEQWAV 200
           M+GGA YN RTVEEVFRDFKGRR  +IKALTTD  +F+ QCDPEK+NLCLYG PNE W V
Sbjct: 1   MDGGANYNPRTVEEVFRDFKGRRAGMIKALTTDVDEFYQQCDPEKENLCLYGFPNELWEV 60

Query: 201 DLXXXXXXXXXXXXXLGINFARNGMPEKDWLSLVAVHSDAWLIAVAFYFGARFGFDKNER 380
           +L             LGINFAR+GM EKDWLSLVAVHSDAWL+AVAFYFGARFGFDK +R
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 381 KRLFNMINELPTIFEAVSGTEKKQVKKDKTSVVNQSSSKGKTNSKARGTESLGKQSKPKQ 560
           KRLFNMIN+LPTIFE V+GT KKQV K+K+SV N SS+K K+NSK RG+ES GK SK  Q
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQV-KEKSSVSNHSSNKSKSNSKVRGSESQGKYSKTPQ 179

Query: 561 PVXXXXXXXXXXXXXXXXALCGACGENYGKDEFWICCDQCELWFHGKCVKITQARAEHIK 740
                              LCGACGENY  DEFWICCD CE WFHGKCVKIT ARAEHIK
Sbjct: 180 K-DEDEGLEEEEEDEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 238

Query: 741 QYKCPSCSNKRAR 779
           QYKCPSCSNKR+R
Sbjct: 239 QYKCPSCSNKRSR 251


>ref|XP_002514076.1| DNA binding protein, putative [Ricinus communis]
           gi|223546532|gb|EEF48030.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 251

 Score =  354 bits (909), Expect = 2e-95
 Identities = 176/253 (69%), Positives = 193/253 (76%)
 Frame = +3

Query: 21  MEGGAQYNARTVEEVFRDFKGRRVALIKALTTDSVDFFNQCDPEKDNLCLYGNPNEQWAV 200
           M+GG QYN RTVEEVFRDFKGRR  +IKALTTD  +F+ QCDPEK+NLCLYG PNEQW V
Sbjct: 1   MDGGVQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNEQWEV 60

Query: 201 DLXXXXXXXXXXXXXLGINFARNGMPEKDWLSLVAVHSDAWLIAVAFYFGARFGFDKNER 380
           +L             LGINFAR+GM EKDWLSLVAVHSDAWL+AVAFYFGARFGFDK +R
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 381 KRLFNMINELPTIFEAVSGTEKKQVKKDKTSVVNQSSSKGKTNSKARGTESLGKQSKPKQ 560
           KRLF MIN+LPTIFE V+GT KKQ  K+K+SV N SS+K K++SK RG+ES GK SK  Q
Sbjct: 121 KRLFTMINDLPTIFEVVTGTAKKQA-KEKSSVSNHSSNKSKSSSKGRGSES-GKYSK-AQ 177

Query: 561 PVXXXXXXXXXXXXXXXXALCGACGENYGKDEFWICCDQCELWFHGKCVKITQARAEHIK 740
           P                  LCGACGENY  DEFWICCD CE WFHGKCVKIT ARAEHIK
Sbjct: 178 PKDEDEGLDEEDEEEHGDTLCGACGENYAADEFWICCDICEKWFHGKCVKITPARAEHIK 237

Query: 741 QYKCPSCSNKRAR 779
           QYKCPSCSNKRAR
Sbjct: 238 QYKCPSCSNKRAR 250


>ref|XP_003633111.1| PREDICTED: PHD finger protein ALFIN-LIKE 5-like [Vitis vinifera]
           gi|297738599|emb|CBI27844.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  354 bits (909), Expect = 2e-95
 Identities = 175/253 (69%), Positives = 191/253 (75%)
 Frame = +3

Query: 21  MEGGAQYNARTVEEVFRDFKGRRVALIKALTTDSVDFFNQCDPEKDNLCLYGNPNEQWAV 200
           M+GG QYN RTVEEVFRDFKGRR  +IKALTTD  +F+ QCDPEK+NLCLYG PNE W V
Sbjct: 1   MDGGPQYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPNELWEV 60

Query: 201 DLXXXXXXXXXXXXXLGINFARNGMPEKDWLSLVAVHSDAWLIAVAFYFGARFGFDKNER 380
           +L             LGINFAR+GM EKDWLSLVAVHSDAWL+AVAFYFGARFGFDK +R
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 381 KRLFNMINELPTIFEAVSGTEKKQVKKDKTSVVNQSSSKGKTNSKARGTESLGKQSKPKQ 560
           KRLFNMIN+LPTIFE V+G  KKQV K+K+SV N SS+K K+NSK RG+ES  K  K  Q
Sbjct: 121 KRLFNMINDLPTIFEVVTGAAKKQV-KEKSSVSNHSSNKSKSNSKVRGSES-AKYLKGGQ 178

Query: 561 PVXXXXXXXXXXXXXXXXALCGACGENYGKDEFWICCDQCELWFHGKCVKITQARAEHIK 740
           P                  LCGACGENY  DEFWICCD CE WFHGKCVKIT ARAEHIK
Sbjct: 179 PKDEEEGLDEVDEEEHGDTLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 238

Query: 741 QYKCPSCSNKRAR 779
           QYKCPSCSNKRAR
Sbjct: 239 QYKCPSCSNKRAR 251


>ref|NP_001237921.1| PHD1 [Glycine max] gi|115394660|gb|ABI97246.1| PHD1 [Glycine max]
          Length = 253

 Score =  354 bits (908), Expect = 2e-95
 Identities = 175/248 (70%), Positives = 190/248 (76%), Gaps = 1/248 (0%)
 Frame = +3

Query: 39  YNARTVEEVFRDFKGRRVALIKALTTDSVDFFNQCDPEKDNLCLYGNPNEQWAVDLXXXX 218
           YN RTVEEVFRDFKGRR  LIKALTTD  DF+NQCDPEK+NLCLYG P+EQW V+L    
Sbjct: 6   YNPRTVEEVFRDFKGRRAGLIKALTTDVEDFYNQCDPEKENLCLYGFPSEQWEVNLPAEE 65

Query: 219 XXXXXXXXXLGINFARNGMPEKDWLSLVAVHSDAWLIAVAFYFGARFGFDKNERKRLFNM 398
                    LGINFAR+GM EKDWLSLVAVHSDAWL+A+AFYFGARFGFDK +RKRLFNM
Sbjct: 66  VPPELPEPVLGINFARDGMQEKDWLSLVAVHSDAWLLAIAFYFGARFGFDKADRKRLFNM 125

Query: 399 INELPTIFEAVSGTEKKQVKKDKTSVVNQSSSKGKTNSKA-RGTESLGKQSKPKQPVXXX 575
           INELPTIFE V+G  KKQV K+K+SV N S SK K++SKA R  ES  +QSKP QP    
Sbjct: 126 INELPTIFEVVTGAAKKQV-KEKSSVSNHSGSKSKSSSKAQRAPESQSRQSKPLQPKDED 184

Query: 576 XXXXXXXXXXXXXALCGACGENYGKDEFWICCDQCELWFHGKCVKITQARAEHIKQYKCP 755
                         LCGACGE+YG DEFWICCD CE WFHGKCVKIT ARAEHIKQYKCP
Sbjct: 185 EELDDQDDDEHGETLCGACGEHYGTDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCP 244

Query: 756 SCSNKRAR 779
           SCSNKRAR
Sbjct: 245 SCSNKRAR 252


>ref|XP_002280895.1| PREDICTED: PHD finger protein ALFIN-LIKE 5 [Vitis vinifera]
           gi|296081695|emb|CBI20700.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score =  353 bits (907), Expect = 3e-95
 Identities = 176/254 (69%), Positives = 194/254 (76%), Gaps = 1/254 (0%)
 Frame = +3

Query: 21  MEGGAQYNARTVEEVFRDFKGRRVALIKALTTDSVDFFNQCDPEKDNLCLYGNPNEQWAV 200
           M+GG  YN RTVEEVFRDFKGRR  +IKALTTD  +F+ QCDP+K+NLCLYG P+EQW V
Sbjct: 1   MDGGPPYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPDKENLCLYGFPSEQWEV 60

Query: 201 DLXXXXXXXXXXXXXLGINFARNGMPEKDWLSLVAVHSDAWLIAVAFYFGARFGFDKNER 380
           +L             LGINFAR+GM EKDWLSLVAVHSDAWL+AVAFYFGARFGFDK +R
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 381 KRLFNMINELPTIFEAVSGTEKKQVKKDKTSVVNQSSSKGKTNSKARGTESLGKQSKPKQ 560
           KRLFNMIN+LPTIFE V+GT KKQV K+K+SV N SS+K K+NSK RG+ES GK SKP Q
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQV-KEKSSVSNHSSNKSKSNSK-RGSESQGKYSKPLQ 178

Query: 561 PV-XXXXXXXXXXXXXXXXALCGACGENYGKDEFWICCDQCELWFHGKCVKITQARAEHI 737
                               LCGACGENY  DEFWICCD CE WFHGKCVKIT ARAEHI
Sbjct: 179 AKDEDEEGLEEEEEEEHGETLCGACGENYASDEFWICCDVCEKWFHGKCVKITPARAEHI 238

Query: 738 KQYKCPSCSNKRAR 779
           KQYKCPSCSNKRAR
Sbjct: 239 KQYKCPSCSNKRAR 252