BLASTX nr result

ID: Coptis24_contig00006854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006854
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634479.1| PREDICTED: 14-3-3 protein [Vitis vinifera]        102   5e-40
emb|CBI19195.3| unnamed protein product [Vitis vinifera]              102   5e-40
ref|XP_002307363.1| predicted protein [Populus trichocarpa] gi|1...   100   2e-39
gb|ACO40495.1| 14-3-3 protein [Vitis vinifera]                        100   3e-39
ref|XP_002301071.1| predicted protein [Populus trichocarpa] gi|1...   100   7e-39

>ref|XP_003634479.1| PREDICTED: 14-3-3 protein [Vitis vinifera]
          Length = 260

 Score =  102 bits (254), Expect(2) = 5e-40
 Identities = 53/56 (94%), Positives = 53/56 (94%), Gaps = 1/56 (1%)
 Frame = +2

Query: 197 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD-ADEIKEAPKGGDEQ 361
           AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD ADEIKEAPK  DEQ
Sbjct: 204 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKRDDEQ 259



 Score = 88.2 bits (217), Expect(2) = 5e-40
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 3   LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 128
           LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA
Sbjct: 169 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 210


>emb|CBI19195.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  102 bits (254), Expect(2) = 5e-40
 Identities = 53/56 (94%), Positives = 53/56 (94%), Gaps = 1/56 (1%)
 Frame = +2

Query: 197 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD-ADEIKEAPKGGDEQ 361
           AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD ADEIKEAPK  DEQ
Sbjct: 103 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKRDDEQ 158



 Score = 88.2 bits (217), Expect(2) = 5e-40
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 3   LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 128
           LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA
Sbjct: 68  LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 109


>ref|XP_002307363.1| predicted protein [Populus trichocarpa] gi|118483504|gb|ABK93650.1|
           unknown [Populus trichocarpa]
           gi|222856812|gb|EEE94359.1| predicted protein [Populus
           trichocarpa]
          Length = 260

 Score =  100 bits (249), Expect(2) = 2e-39
 Identities = 54/57 (94%), Positives = 54/57 (94%), Gaps = 2/57 (3%)
 Frame = +2

Query: 197 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD-ADEIKE-APKGGDEQ 361
           AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD ADEIKE APK GDEQ
Sbjct: 204 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDAADEIKEAAPKTGDEQ 260



 Score = 88.2 bits (217), Expect(2) = 2e-39
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 3   LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 128
           LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA
Sbjct: 169 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 210


>gb|ACO40495.1| 14-3-3 protein [Vitis vinifera]
          Length = 260

 Score = 99.8 bits (247), Expect(2) = 3e-39
 Identities = 52/56 (92%), Positives = 52/56 (92%), Gaps = 1/56 (1%)
 Frame = +2

Query: 197 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD-ADEIKEAPKGGDEQ 361
           AFDEAIAELDTLGEESYKDSTLIMQLLRDN TLWTSDMQDD ADEIKEAPK  DEQ
Sbjct: 204 AFDEAIAELDTLGEESYKDSTLIMQLLRDNHTLWTSDMQDDGADEIKEAPKRDDEQ 259



 Score = 88.2 bits (217), Expect(2) = 3e-39
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +3

Query: 3   LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 128
           LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA
Sbjct: 169 LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 210


>ref|XP_002301071.1| predicted protein [Populus trichocarpa] gi|118482439|gb|ABK93142.1|
           unknown [Populus trichocarpa]
           gi|222842797|gb|EEE80344.1| predicted protein [Populus
           trichocarpa]
          Length = 261

 Score =  100 bits (249), Expect(2) = 7e-39
 Identities = 54/57 (94%), Positives = 54/57 (94%), Gaps = 2/57 (3%)
 Frame = +2

Query: 197 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD-ADEIKE-APKGGDEQ 361
           AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD ADEIKE APK GDEQ
Sbjct: 204 AFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKPGDEQ 260



 Score = 86.3 bits (212), Expect(2) = 7e-39
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 3   LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIA 128
           LAPTHPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAIA
Sbjct: 169 LAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIA 210


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