BLASTX nr result

ID: Coptis24_contig00006839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006839
         (1556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35167.3| unnamed protein product [Vitis vinifera]              368   e-109
ref|XP_002521958.1| conserved hypothetical protein [Ricinus comm...   356   e-107
ref|XP_002319095.1| predicted protein [Populus trichocarpa] gi|2...   358   e-105
ref|XP_002461891.1| hypothetical protein SORBIDRAFT_02g009910 [S...   356   e-103
ref|NP_001145279.1| uncharacterized protein LOC100278574 [Zea ma...   355   e-102

>emb|CBI35167.3| unnamed protein product [Vitis vinifera]
          Length = 317

 Score =  368 bits (944), Expect(2) = e-109
 Identities = 184/268 (68%), Positives = 201/268 (75%), Gaps = 2/268 (0%)
 Frame = -1

Query: 1298 SDAWRNFHNLHSTGKFFKERRYLLKEFPELLHANEDSKVLEVGCGNGSTVLPILRGNPSI 1119
            S AW  FH  HSTG+FFKERRYLLKEFPELL  +E S VLEVGCGNGST LPILRG  +I
Sbjct: 48   SQAWNQFHIRHSTGRFFKERRYLLKEFPELLSCDEYSFVLEVGCGNGSTALPILRGRDNI 107

Query: 1118 IVYACDCSSEALERAKEVIATFDKVSIKQRFHPFLCDLSQGGFPNWLIYYGEAS--LNKP 945
            I+YACDCS+EALERA E+I   +  S+  RFHPF CD S  GFP WL         L K 
Sbjct: 108  IIYACDCSNEALERANEMIHASNVGSVTDRFHPFCCDFSINGFPKWLACDSCQGNFLQKQ 167

Query: 944  IDSIAGSSVHTEKELDDLSFFKKGKCCIGGMDFVTMIFTLSAVPFQSMATAIVECLSVLK 765
             D I+      E  L+DLS   + KCCIGG+DFVT+IF LSAVP   M TAI EC SVLK
Sbjct: 168  HDQISDVKEKKETNLNDLSSLGESKCCIGGVDFVTLIFMLSAVPLHRMPTAIRECFSVLK 227

Query: 764  PGGLLLFRDYGLYDMTMLRFEPNKRVGFREYMRSDGTRSYFFSLDTVRELFLGAGCIELE 585
            PGGLLLFRDYGLYDMTMLRFEP KRVGFREYMRSDGTRSYFF +DTVR+LF G+G  ELE
Sbjct: 228  PGGLLLFRDYGLYDMTMLRFEPEKRVGFREYMRSDGTRSYFFCMDTVRDLFTGSGFTELE 287

Query: 584  LEYCCVNSVNRLKGKTMRRVWVHGKFQK 501
            LEYCCV S NR  GK+M RVWVHGKFQK
Sbjct: 288  LEYCCVKSTNRRNGKSMHRVWVHGKFQK 315



 Score = 55.8 bits (133), Expect(2) = e-109
 Identities = 22/38 (57%), Positives = 31/38 (81%)
 Frame = -2

Query: 1513 MGEESVYFSKDFEWQHLKNEIENNPSFAHHFLPFEPSS 1400
            MG+E+ YFSKDFEW+ LK E+E+NPS ++HF  F+ +S
Sbjct: 1    MGKEAEYFSKDFEWEKLKEEVESNPSLSYHFQTFDSNS 38


>ref|XP_002521958.1| conserved hypothetical protein [Ricinus communis]
            gi|223538762|gb|EEF40362.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 332

 Score =  356 bits (914), Expect(2) = e-107
 Identities = 177/271 (65%), Positives = 211/271 (77%), Gaps = 3/271 (1%)
 Frame = -1

Query: 1298 SDAWRNFHNLHSTGKFFKERRYLLKEFPELLHANEDSKVLEVGCGNGSTVLPILRGNPSI 1119
            S+AW+ FH  HSTG+FFKERRYLLKEFPEL+   + SKVLEVGCGNGS+V+PILRGN  I
Sbjct: 53   SNAWQRFHVRHSTGRFFKERRYLLKEFPELVSCRDFSKVLEVGCGNGSSVIPILRGNKRI 112

Query: 1118 IVYACDCSSEALERAKEVIATFDKVSIKQRFHPFLCDLSQGGFPNWLIYYGEASLNKPID 939
             VYACDCS+E L+RA+E++   + VS++ RF  F  D +  GFP WL+      +     
Sbjct: 113  FVYACDCSNETLDRAQEIVNASNIVSVQGRFKTFYSDFAFTGFPKWLLCDSCRLILPHKQ 172

Query: 938  SIAGSSVHTEKELDDLS---FFKKGKCCIGGMDFVTMIFTLSAVPFQSMATAIVECLSVL 768
                SS   E+ + D++     ++  CCIGG+DFVT+IFTLSAV  + M TAI+ECLSVL
Sbjct: 173  EECLSSDVKERSIIDVNGSGSLEESGCCIGGVDFVTLIFTLSAVSLKMMPTAILECLSVL 232

Query: 767  KPGGLLLFRDYGLYDMTMLRFEPNKRVGFREYMRSDGTRSYFFSLDTVRELFLGAGCIEL 588
            KPGGLLLFRDYGLYDMTMLRFE NKRVGFREYMR+DGTRSYFFSLDTVR+LF+GAG IEL
Sbjct: 233  KPGGLLLFRDYGLYDMTMLRFEANKRVGFREYMRADGTRSYFFSLDTVRDLFVGAGFIEL 292

Query: 587  ELEYCCVNSVNRLKGKTMRRVWVHGKFQKAI 495
            ELEYCCV SVNR KGK+MRRVW+HGKFQK +
Sbjct: 293  ELEYCCVKSVNRRKGKSMRRVWIHGKFQKPV 323



 Score = 62.0 bits (149), Expect(2) = e-107
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -2

Query: 1507 EESVYFSKDFEWQHLKNEIENNPSFAHHFLPFEPSS 1400
            EE+ YFSKDFEW+ LK EIENNPSF++HFLPF  SS
Sbjct: 8    EEANYFSKDFEWETLKQEIENNPSFSYHFLPFVSSS 43


>ref|XP_002319095.1| predicted protein [Populus trichocarpa] gi|222857471|gb|EEE95018.1|
            predicted protein [Populus trichocarpa]
          Length = 326

 Score =  358 bits (919), Expect(2) = e-105
 Identities = 177/268 (66%), Positives = 205/268 (76%), Gaps = 2/268 (0%)
 Frame = -1

Query: 1298 SDAWRNFHNLHSTGKFFKERRYLLKEFPELLHANEDSKVLEVGCGNGSTVLPILRGNPSI 1119
            S AW+ FH  HS+GKFFKERRYLLKEFPEL+   E SKVLEVGCGNGS+ +PILRGN  I
Sbjct: 57   SKAWKRFHLRHSSGKFFKERRYLLKEFPELVSCKEFSKVLEVGCGNGSSAIPILRGNKDI 116

Query: 1118 IVYACDCSSEALERAKEVIATFDKVSIKQRFHPFLCDLSQGGFPNWLIYYGEASLNKPID 939
            IVYACDCSSE LERAKE++ + +  +++ RFHPF CD +  GFP WL+            
Sbjct: 117  IVYACDCSSETLERAKEIVHSTNIFAVQNRFHPFFCDFAFTGFPKWLVCDSCVESFSLKQ 176

Query: 938  SIAGSSVHTEKELDDLSFF--KKGKCCIGGMDFVTMIFTLSAVPFQSMATAIVECLSVLK 765
                S V      D    +  ++  CCIGG+DFV++IFTLSAVP + M++AI+EC SVLK
Sbjct: 177  QEYSSDVKEGGVADKSGSYLSRECGCCIGGVDFVSLIFTLSAVPQKKMSSAIMECFSVLK 236

Query: 764  PGGLLLFRDYGLYDMTMLRFEPNKRVGFREYMRSDGTRSYFFSLDTVRELFLGAGCIELE 585
            PGGLLLFRDYGLYDMTMLRFE  KRVGFREYMRSDGTRSYFF LDTVR+LF+G G IELE
Sbjct: 237  PGGLLLFRDYGLYDMTMLRFEQEKRVGFREYMRSDGTRSYFFCLDTVRDLFVGVGFIELE 296

Query: 584  LEYCCVNSVNRLKGKTMRRVWVHGKFQK 501
            LEYCCV SVNR KGK+M+RVWVHGKFQK
Sbjct: 297  LEYCCVKSVNRRKGKSMQRVWVHGKFQK 324



 Score = 51.6 bits (122), Expect(2) = e-105
 Identities = 21/37 (56%), Positives = 28/37 (75%)
 Frame = -2

Query: 1522 EKKMGEESVYFSKDFEWQHLKNEIENNPSFAHHFLPF 1412
            E +   E+ YFSKDFEW+ L+ EIE+NPS+ +H LPF
Sbjct: 4    EAEAEAEAEYFSKDFEWETLRQEIEDNPSYQYHLLPF 40


>ref|XP_002461891.1| hypothetical protein SORBIDRAFT_02g009910 [Sorghum bicolor]
            gi|241925268|gb|EER98412.1| hypothetical protein
            SORBIDRAFT_02g009910 [Sorghum bicolor]
          Length = 331

 Score =  356 bits (913), Expect(2) = e-103
 Identities = 174/267 (65%), Positives = 207/267 (77%), Gaps = 1/267 (0%)
 Frame = -1

Query: 1298 SDAWRNFHNLHSTGKFFKERRYLLKEFPELLHANEDSKVLEVGCGNGSTVLPILRGNPSI 1119
            S+AWR+FH  H++GKFFKERRYLLKEFPEL  + + +KVLEVGCGNGST + ILR +  I
Sbjct: 63   SEAWRSFHRRHASGKFFKERRYLLKEFPELCSSKDHAKVLEVGCGNGSTAVSILRSSERI 122

Query: 1118 IVYACDCSSEALERAKEVIATFDKVSIKQRFHPFLCDLSQGGFPNWLIYYG-EASLNKPI 942
             V+ACDCS + LERA E+I+    + IK RFHPFL D+S+  FP+WL     + SL K  
Sbjct: 123  TVFACDCSKDTLERANEIISNTKGIDIKDRFHPFLMDVSKETFPDWLFCKACQCSLGKDA 182

Query: 941  DSIAGSSVHTEKELDDLSFFKKGKCCIGGMDFVTMIFTLSAVPFQSMATAIVECLSVLKP 762
              +   S H  ++   + F ++ +CC GGMDF+TMIFTLSA+PF  M T I +C+SVLKP
Sbjct: 183  ALLLDPSHHGIRKEHPV-FLRENQCCAGGMDFITMIFTLSAIPFDIMPTTIEQCVSVLKP 241

Query: 761  GGLLLFRDYGLYDMTMLRFEPNKRVGFREYMRSDGTRSYFFSLDTVRELFLGAGCIELEL 582
            GGLLLFRDYGLYDMTMLRF P++RVGFREYMRSDGT SYFFSLDTVRELF  AG +ELEL
Sbjct: 242  GGLLLFRDYGLYDMTMLRFLPHQRVGFREYMRSDGTFSYFFSLDTVRELFHAAGLVELEL 301

Query: 581  EYCCVNSVNRLKGKTMRRVWVHGKFQK 501
            EYCCV SVNR KGKTM+RVWVHGKFQK
Sbjct: 302  EYCCVKSVNRKKGKTMQRVWVHGKFQK 328



 Score = 46.2 bits (108), Expect(2) = e-103
 Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
 Frame = -2

Query: 1504 ESVYFSKDFEWQHLKNEIENNPSFAHHFLPF-EPSSS 1397
            E+ Y S DFEW+ LK E+E+ P+F++H  PF EP++S
Sbjct: 18   EAEYHSHDFEWEELKEEVESGPAFSYHLSPFPEPAAS 54


>ref|NP_001145279.1| uncharacterized protein LOC100278574 [Zea mays]
            gi|195654037|gb|ACG46486.1| hypothetical protein [Zea
            mays]
          Length = 329

 Score =  355 bits (912), Expect(2) = e-102
 Identities = 175/267 (65%), Positives = 205/267 (76%), Gaps = 1/267 (0%)
 Frame = -1

Query: 1298 SDAWRNFHNLHSTGKFFKERRYLLKEFPELLHANEDSKVLEVGCGNGSTVLPILRGNPSI 1119
            S+AWR+FH  H++GKFFKERRYLLKEFPEL  + + +KVLEVGCGNGST + ILR +  I
Sbjct: 62   SEAWRSFHRRHASGKFFKERRYLLKEFPELCSSQDHAKVLEVGCGNGSTAVSILRSSERI 121

Query: 1118 IVYACDCSSEALERAKEVIATFDKVSIKQRFHPFLCDLSQGGFPNWLIYYG-EASLNKPI 942
             V+ACDCS + LE+A E+I+    ++IK RFHPFL D+S+  FP+WL     + SL K  
Sbjct: 122  TVFACDCSKDTLEKANEIISNTKGINIKDRFHPFLMDVSKETFPDWLFCKACQTSLGKAA 181

Query: 941  DSIAGSSVHTEKELDDLSFFKKGKCCIGGMDFVTMIFTLSAVPFQSMATAIVECLSVLKP 762
             S+   S H  +E     F    +CC GGMDF+TMIFTLSA+PF  M T I +C+SVLKP
Sbjct: 182  ASLLDPSHHGIREHP--VFLGDNRCCAGGMDFITMIFTLSAIPFDIMPTTIEQCVSVLKP 239

Query: 761  GGLLLFRDYGLYDMTMLRFEPNKRVGFREYMRSDGTRSYFFSLDTVRELFLGAGCIELEL 582
            GGLLLFRDYGLYDMTMLRF P++RVGFREYMRSDGT SYFFSLDTVRELF  AG +ELEL
Sbjct: 240  GGLLLFRDYGLYDMTMLRFLPHQRVGFREYMRSDGTFSYFFSLDTVRELFHAAGLVELEL 299

Query: 581  EYCCVNSVNRLKGKTMRRVWVHGKFQK 501
            EYCCV SVNR  GKTMRRVWVHGKFQK
Sbjct: 300  EYCCVKSVNRKNGKTMRRVWVHGKFQK 326



 Score = 45.4 bits (106), Expect(2) = e-102
 Identities = 18/38 (47%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
 Frame = -2

Query: 1507 EESVYFSKDFEWQHLKNEIENNPSFAHHFLPF-EPSSS 1397
            +E+ Y S+DFEW+ LK E+E+ P F++H  PF +P++S
Sbjct: 16   DEAEYHSRDFEWEDLKEEVESGPVFSYHLSPFLDPAAS 53


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