BLASTX nr result

ID: Coptis24_contig00006836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006836
         (2082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28924.3| unnamed protein product [Vitis vinifera]              156   2e-35
ref|XP_002272957.1| PREDICTED: uncharacterized protein LOC100246...   156   2e-35
ref|XP_002319377.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-35
ref|XP_002517981.1| micronuclear linker histone polyprotein, put...   150   1e-33
ref|XP_003526292.1| PREDICTED: uncharacterized protein LOC100814...   122   4e-25

>emb|CBI28924.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  156 bits (395), Expect = 2e-35
 Identities = 116/336 (34%), Positives = 169/336 (50%), Gaps = 21/336 (6%)
 Frame = -2

Query: 1853 HKLRERHIFTLLIKDKDHDXXXXXXXXQKERESAKEMKRKVEELKAKTYSLRTQKMELIN 1674
            HKLR+R IF LL+K+KD          QKERES KE +RK+EELKAK   L++Q MEL +
Sbjct: 4    HKLRDRRIFNLLVKEKDRQRISLQLLLQKERESTKEERRKIEELKAKILYLKSQNMELHS 63

Query: 1673 KVAAMQTISSAIKEEKRELETTVAEKQNEINKLQQMKIDSNKENSQVAALRELLKQKETE 1494
            +V  MQ+  +++++E + LE    EKQ EI  LQ+ + DS KEN +  AL+E+LK++E E
Sbjct: 64   RVMEMQSTIASLRDEHKTLEMAFDEKQTEIKMLQERETDSIKENPEAIALKEILKKREAE 123

Query: 1493 IGQLKHQIEKPTNIWSVSTDDPSNPAVNLTSEAVSDKTGNWKHTELEASFKDEQLEKSYV 1314
            I  LKH +            DPSNP VNLT+     +   W+        K++       
Sbjct: 124  IEDLKHHL------------DPSNPPVNLTAR----ENMGWEDKTKAREGKEQNEHLHEA 167

Query: 1313 HDDGKPSSVKGEGDIKVVTEGTEL-KETHGEQK-HKFENGRDGEA----SRERINAVEKN 1152
              +G    + G GD      G  L KE  GE K  KFEN +DG A      + INA + N
Sbjct: 168  DSNGNGQKLTG-GDGSENGVGVNLQKEMTGEAKFQKFENTQDGVAGGITGEKSINADQGN 226

Query: 1151 TEENHRREKDLG--------DSMSSLFENPQGKEGFIERGENEKINKTEVTAMTVNGGLN 996
              ++ + E D G        ++  ++F++  GK   I+  +N+K+   +   +  NG L 
Sbjct: 227  KNKHSQDELDFGTREEKADPNATEAIFKSEVGKT--IDEDDNKKVMDNKEHGIVRNGHLE 284

Query: 995  SENGGSD------AMTTNG-KMEMKLKRQDKSGSKV 909
                  D       M + G KMEM     + +GS +
Sbjct: 285  KHENSHDGEGQKLGMISKGVKMEMPGSSMNGAGSGI 320


>ref|XP_002272957.1| PREDICTED: uncharacterized protein LOC100246486 [Vitis vinifera]
          Length = 517

 Score =  156 bits (395), Expect = 2e-35
 Identities = 116/336 (34%), Positives = 169/336 (50%), Gaps = 21/336 (6%)
 Frame = -2

Query: 1853 HKLRERHIFTLLIKDKDHDXXXXXXXXQKERESAKEMKRKVEELKAKTYSLRTQKMELIN 1674
            HKLR+R IF LL+K+KD          QKERES KE +RK+EELKAK   L++Q MEL +
Sbjct: 39   HKLRDRRIFNLLVKEKDRQRISLQLLLQKERESTKEERRKIEELKAKILYLKSQNMELHS 98

Query: 1673 KVAAMQTISSAIKEEKRELETTVAEKQNEINKLQQMKIDSNKENSQVAALRELLKQKETE 1494
            +V  MQ+  +++++E + LE    EKQ EI  LQ+ + DS KEN +  AL+E+LK++E E
Sbjct: 99   RVMEMQSTIASLRDEHKTLEMAFDEKQTEIKMLQERETDSIKENPEAIALKEILKKREAE 158

Query: 1493 IGQLKHQIEKPTNIWSVSTDDPSNPAVNLTSEAVSDKTGNWKHTELEASFKDEQLEKSYV 1314
            I  LKH +            DPSNP VNLT+     +   W+        K++       
Sbjct: 159  IEDLKHHL------------DPSNPPVNLTAR----ENMGWEDKTKAREGKEQNEHLHEA 202

Query: 1313 HDDGKPSSVKGEGDIKVVTEGTEL-KETHGEQK-HKFENGRDGEA----SRERINAVEKN 1152
              +G    + G GD      G  L KE  GE K  KFEN +DG A      + INA + N
Sbjct: 203  DSNGNGQKLTG-GDGSENGVGVNLQKEMTGEAKFQKFENTQDGVAGGITGEKSINADQGN 261

Query: 1151 TEENHRREKDLG--------DSMSSLFENPQGKEGFIERGENEKINKTEVTAMTVNGGLN 996
              ++ + E D G        ++  ++F++  GK   I+  +N+K+   +   +  NG L 
Sbjct: 262  KNKHSQDELDFGTREEKADPNATEAIFKSEVGKT--IDEDDNKKVMDNKEHGIVRNGHLE 319

Query: 995  SENGGSD------AMTTNG-KMEMKLKRQDKSGSKV 909
                  D       M + G KMEM     + +GS +
Sbjct: 320  KHENSHDGEGQKLGMISKGVKMEMPGSSMNGAGSGI 355


>ref|XP_002319377.1| predicted protein [Populus trichocarpa] gi|222857753|gb|EEE95300.1|
            predicted protein [Populus trichocarpa]
          Length = 531

 Score =  154 bits (390), Expect = 7e-35
 Identities = 141/502 (28%), Positives = 225/502 (44%), Gaps = 36/502 (7%)
 Frame = -2

Query: 1745 MKRKVEELKAKTYSLRTQKMELINKVAAMQTISSAIKEEKRELETTVAEKQNEINKLQQM 1566
            MKRK EE+KAK YSLR QKMEL  ++  MQ+   ++K+E++ +E+ + EKQ+EI  L++ 
Sbjct: 1    MKRKTEEMKAKIYSLRIQKMELDRRLLEMQSTIGSMKDEQKIMESALEEKQSEIKMLRET 60

Query: 1565 KIDSNKENSQVAALRELLKQKETEIGQLKHQIEKPTNIWSVSTDDPSNPAVNLT------ 1404
               + KE  Q+  LRE LKQKE EI  LKH++E P  IWSVSTDDPS+P+VN T      
Sbjct: 61   NKGAEKETLQMEVLRESLKQKEAEIEDLKHRLEYPAKIWSVSTDDPSSPSVNRTATLNMI 120

Query: 1403 SEAVSDKTGNWKHTELEASFKDEQLEKSYVHDDGKPSSVKGE--GDIKVVTEGTELK--- 1239
            SE   +   + +   L+ S  D     S   + G  +S+  E  GD   V   +E K   
Sbjct: 121  SENKIEAGKSEEEVLLQESANDSNGLNSTKGNGGNTTSINQEQVGDTATVENASESKVAI 180

Query: 1238 -----ETHGEQKHKFENGRDGEA---SRERINAVEKNTEENHRREKDLGDSMSSLFENPQ 1083
                 E   EQ    E  R+G A   + +++N  E + E+      +  ++ ++   N  
Sbjct: 181  PDRTEEPREEQLQMLEGSRNGRAIGITNDQVNKSESSQEKGTSGSGEENNASNATETNVS 240

Query: 1082 --GKEGFIERGENEKINKT-EVTAMTVNGGLNSEN-----GGSDAMTTNGKMEMKLKRQD 927
              G+   I   +NE+ +K  E   +T +G L  EN     G  +      K++M    ++
Sbjct: 241  RIGRVSKITDADNEEKSKDGEEHKVTRDGKLELENVLEAEGHQETFRGGVKLKMMDNSRN 300

Query: 926  KSGSKVRDDSEXXXXXXXXXXXXXXREMATSENGAAKRMGGNIITAIPHQKRRKVIRRDG 747
                K R  S                E+   EN  A++M      +    + R + R +G
Sbjct: 301  TRREKYRHASRVRGKRGEMGTRNRLLEIRNHENNGAEKMRSR--KSPTDDQGRLIDREEG 358

Query: 746  RLHQNDNTFAVDKV--SVEGNTFDHYNVKGLRRADRVDFREKRGVD-SSEVNSEQYKTYX 576
            R   +  T  + K   S +G T +H N       D  D + K G D ++   SE ++T  
Sbjct: 359  RASNDGKTEEIRKAVDSSDGKTMEHQN-----HEDSKDLQNKLGKDGTNHQMSEDHETL- 412

Query: 575  XXXXXXXXXXQGVISGDSSLIQTAKDTRAISANSTQ-QVGN-----SDDLLSKDGQLENK 414
                                ++ A D++ ++  S   Q GN       + L K  Q E++
Sbjct: 413  ------------------ERLRIAHDSKELTNGSLDGQPGNIRSNDRKESLDKGQQHEDR 454

Query: 413  QASQYEEDQKISQVTNADSSTN 348
            Q +   ++ + S + N   ++N
Sbjct: 455  QQASGTQESRNSSIMNNKENSN 476


>ref|XP_002517981.1| micronuclear linker histone polyprotein, putative [Ricinus communis]
            gi|223542963|gb|EEF44499.1| micronuclear linker histone
            polyprotein, putative [Ricinus communis]
          Length = 602

 Score =  150 bits (380), Expect = 1e-33
 Identities = 116/327 (35%), Positives = 167/327 (51%), Gaps = 17/327 (5%)
 Frame = -2

Query: 1853 HKLRERHIFTLLIKDKDHDXXXXXXXXQKERESAKEMKRKVEELKAKTYSLRTQKMELIN 1674
            HKLRER IF LL+K+KD          QKE+E  KEMKRK EE+KAK YSLR QKME   
Sbjct: 37   HKLRERRIFNLLVKEKDSQLISLHLLLQKEKEYNKEMKRKTEEMKAKIYSLRNQKMETER 96

Query: 1673 KVAAMQTISSAIKEEKRELETTVAEKQNEINKLQQMKIDSNKENSQVAALRELLKQKETE 1494
            ++  +Q+   ++K+E + +E+ + EKQNEIN   +  +   KE +Q+ AL E LKQ+E E
Sbjct: 97   RILELQSTIDSLKDEMKIVESALEEKQNEINIHTETSMYPEKE-TQMIALMESLKQREAE 155

Query: 1493 IGQLKHQIEKPTNIWSVSTDDPSNPAVNLTSEAVSDKTGNWKHTELEASFKDEQLEKS-- 1320
            I  LK  +E P  I SVST DPSN      ++ +S+ TGN    +     +D QL KS  
Sbjct: 156  IEDLKSHLENPLKIPSVSTGDPSN------TQLISNVTGNSADGD---KTEDRQLHKSTN 206

Query: 1319 ---YVH-------DDGKPSSVKGEGDIKVVTEGTELKE--THGEQKHKFENGRDGEASRE 1176
               Y++       D+     VKG+   +V    +E K   T     +K       E S E
Sbjct: 207  YSKYLNPTRGNESDNASTRVVKGDNTARVDEARSENKVGITDSLVVNKEGQLEMLENSLE 266

Query: 1175 RI---NAVEKNTEENHRREKDLGDSMSSLFENPQGKEGFIERGENEKINKTEVTAMTVNG 1005
            R+    A  K + EN +  KD G   S+L    + K   +  G    ++  E  + T N 
Sbjct: 267  RLRNKGAPGKESSENGQGNKDEGSQASALGLGEENKFTNVTEG---IVSTAEKVSQTGNA 323

Query: 1004 GLNSENGGSDAMTTNGKMEMKLKRQDK 924
             + S +G       +G++E+K  +Q+K
Sbjct: 324  DMKSVDGKGQKAARDGQLELKNSQQEK 350


>ref|XP_003526292.1| PREDICTED: uncharacterized protein LOC100814540 [Glycine max]
          Length = 499

 Score =  122 bits (306), Expect = 4e-25
 Identities = 95/328 (28%), Positives = 149/328 (45%), Gaps = 18/328 (5%)
 Frame = -2

Query: 1853 HKLRERHIFTLLIKDKDHDXXXXXXXXQKERESAKEMKRKVEELKAKTYSLRTQKMELIN 1674
            HKLRER I TLL+K+KD          QKER+ +KE++ K EE+K K Y+LR+QKMEL  
Sbjct: 39   HKLRERRICTLLVKEKDQQILALQLLLQKERDRSKELRSKNEEMKGKLYTLRSQKMELAR 98

Query: 1673 KVAAMQTISSAIKEEKRELETTVAEKQNEINKLQQMKIDSNKENSQVAALRELLKQKETE 1494
             V  MQ+   ++K+E++ +E+   E+QNE+  +Q+      +    + ALR+ LK KE E
Sbjct: 99   TVGEMQSTLDSLKDEQKLMESAFEEQQNELRSMQEKGKSVAQGGYDIEALRDNLKHKEEE 158

Query: 1493 IGQLKHQIEKPTN------------IWSVSTDDPSNPAVNLTSEAVSDKTGNWKHTELE- 1353
            +  LK ++E P N              +++  D      N    A  +   N   ++ E 
Sbjct: 159  LEDLKRRLETPVNDHPTIFNEIVTANGTIAAQDEIEKDENSGESAKHEGDNNEGASKSEL 218

Query: 1352 ASFKDEQLE---KSYVHDDGKPSSVKGEGDIKVVTEGTELKETHGEQKHKFENGRDGEAS 1182
              FKD ++    +  +  DG   + K   D +VV +G E K    E   + EN  DG   
Sbjct: 219  TKFKDGEVATEMRDGIRTDG-DGATKDMDDAEVV-DGREKKAMREEHAGQVENNTDGGG- 275

Query: 1181 RERINAVEKNTEENHRREKDLGDSMSSLFENPQGKEG--FIERGENEKINKTEVTAMTVN 1008
              R+  +     ++ R  +  G    +  +N   +    F    +N K+ K E+    V 
Sbjct: 276  --RVKQLAGTKRKHSRASRMKGKRWRTTVKNSSMENNGVFENHSDNRKVYKDELKGRRVG 333

Query: 1007 GGLNSENGGSDAMTTNGKMEMKLKRQDK 924
               N EN   +    N   + K K   K
Sbjct: 334  KVSNEENFAREDEGRNNNSQRKEKPHAK 361


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