BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006827
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]    92   6e-17
ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_003626608.1| Pentatricopeptide repeat-containing protein ...    84   2e-14
ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple...    84   2e-14
emb|CBI38715.3| unnamed protein product [Vitis vinifera]               82   6e-14

>emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
          Length = 422

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/79 (56%), Positives = 57/79 (72%)
 Frame = +2

Query: 2   MEEACFVLEEMLRHGEVPHTETWVTIVQRICCEGESMEMERILQNVLKIEITRDAKIVDL 181
           +EEAC VL EMLRHGE  HTETWV I+ RIC   + + ME I    LK+EIT + ++V+ 
Sbjct: 344 LEEACEVLXEMLRHGEAXHTETWVAIIPRICEVDKLVRMENIFDEXLKLEITPNTRLVEA 403

Query: 182 GQGLEEFLIRKVQAKSWKA 238
           G GLEE++IRKV+ KS KA
Sbjct: 404 GIGLEEYVIRKVRDKSRKA 422


>ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|222861674|gb|EEE99216.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/78 (51%), Positives = 56/78 (71%)
 Frame = +2

Query: 2   MEEACFVLEEMLRHGEVPHTETWVTIVQRICCEGESMEMERILQNVLKIEITRDAKIVDL 181
           +EEAC V+EE+L+HGE PHTETWV +V RIC   +   +  IL  V K+E+  D +IV+ 
Sbjct: 397 IEEACGVVEELLKHGEAPHTETWVMMVSRICEVDDLQRIGEILDKVKKVELKGDTRIVEA 456

Query: 182 GQGLEEFLIRKVQAKSWK 235
           G GLEE+LI++ Q K+W+
Sbjct: 457 GIGLEEYLIKRTQQKAWR 474


>ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240852|gb|ABD32710.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355501623|gb|AES82826.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 451

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/76 (51%), Positives = 56/76 (73%)
 Frame = +2

Query: 2   MEEACFVLEEMLRHGEVPHTETWVTIVQRICCEGESMEMERILQNVLKIEITRDAKIVDL 181
           +EEAC VL + L H E PH +TW+ IV +IC   + ++++ +L+ VLKIEI  D +IVD 
Sbjct: 373 IEEACGVLTKSLEHREAPHKDTWMIIVPQICEVDDGVKIDGVLEEVLKIEIKGDTRIVDA 432

Query: 182 GQGLEEFLIRKVQAKS 229
           G GLE++LIRK++AKS
Sbjct: 433 GIGLEDYLIRKIRAKS 448


>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
           vinifera]
          Length = 1105

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/68 (55%), Positives = 49/68 (72%)
 Frame = +2

Query: 2   MEEACFVLEEMLRHGEVPHTETWVTIVQRICCEGESMEMERILQNVLKIEITRDAKIVDL 181
           +EEAC VL EMLRHGE PHTETWV I+ RIC   + + ME I    LK+EIT + ++V+ 
Sbjct: 301 LEEACEVLREMLRHGEAPHTETWVAIIPRICEVDKLVRMENIFDEALKLEITPNTRLVEA 360

Query: 182 GQGLEEFL 205
           G GLEE++
Sbjct: 361 GIGLEEYM 368


>emb|CBI38715.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/66 (57%), Positives = 47/66 (71%)
 Frame = +2

Query: 2   MEEACFVLEEMLRHGEVPHTETWVTIVQRICCEGESMEMERILQNVLKIEITRDAKIVDL 181
           +EEAC VL EMLRHGE PHTETWV I+ RIC   + + ME I    LK+EIT + ++V+ 
Sbjct: 317 LEEACEVLREMLRHGEAPHTETWVAIIPRICEVDKLVRMENIFDEALKLEITPNTRLVEA 376

Query: 182 GQGLEE 199
           G GLEE
Sbjct: 377 GIGLEE 382