BLASTX nr result

ID: Coptis24_contig00006816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006816
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151367.1| PREDICTED: uncharacterized protein LOC101223...   167   8e-40
ref|XP_002328279.1| predicted protein [Populus trichocarpa] gi|2...   149   4e-34
ref|XP_002312797.1| predicted protein [Populus trichocarpa] gi|2...   147   8e-34
emb|CAN78386.1| hypothetical protein VITISV_017367 [Vitis vinifera]   143   2e-32
ref|XP_002283053.1| PREDICTED: uncharacterized protein LOC100243...   142   3e-32

>ref|XP_004151367.1| PREDICTED: uncharacterized protein LOC101223147 [Cucumis sativus]
           gi|449467872|ref|XP_004151646.1| PREDICTED:
           uncharacterized protein LOC101213314 [Cucumis sativus]
           gi|449524571|ref|XP_004169295.1| PREDICTED:
           uncharacterized LOC101223147 [Cucumis sativus]
          Length = 159

 Score =  167 bits (424), Expect = 8e-40
 Identities = 78/126 (61%), Positives = 101/126 (80%), Gaps = 1/126 (0%)
 Frame = -2

Query: 388 KSFFPSRPLKDSLPLSQ-NSTTDQXXXXXXXXXXXSVKIQPISSPATSWALRKSKSMSSL 212
           +SF PSRPL D+LPLS  +S +DQ            ++IQPISSPAT+WA+RKSKSMSS 
Sbjct: 12  RSFLPSRPLPDALPLSHTDSPSDQTLRRRLSSLS--LRIQPISSPATAWAIRKSKSMSSF 69

Query: 211 GESAGTSIRKWWDWGWAWILTKKPTFAQDLEMNEEESAMLGSHSKGSWRHVLYKVKSEFR 32
           G+ AG+S+RKWWDWGWAWIL++KP FA+DLEMNEEES +LGS ++GSW+HV +K +SE R
Sbjct: 70  GDLAGSSVRKWWDWGWAWILSRKPIFAKDLEMNEEESKILGSQNRGSWKHVFFKFRSEIR 129

Query: 31  RLVGSN 14
           +L+GS+
Sbjct: 130 KLIGSD 135


>ref|XP_002328279.1| predicted protein [Populus trichocarpa] gi|222837794|gb|EEE76159.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score =  149 bits (375), Expect = 4e-34
 Identities = 75/132 (56%), Positives = 95/132 (71%), Gaps = 2/132 (1%)
 Frame = -2

Query: 403 MSSLKKSFFPSRPLKDSLPLSQ--NSTTDQXXXXXXXXXXXSVKIQPISSPATSWALRKS 230
           MSS+ +SF        +LP+SQ  +S               S+KIQPISSPAT WA ++S
Sbjct: 1   MSSIVQSFQKRNHGAAALPVSQTHDSKDRGAAALRRRISSLSLKIQPISSPATQWAFQRS 60

Query: 229 KSMSSLGESAGTSIRKWWDWGWAWILTKKPTFAQDLEMNEEESAMLGSHSKGSWRHVLYK 50
           KS+S++GE AG+SIRKWW WGW+WIL+KKP FAQDLEMNEEE+ +LG H+KGSWRHV YK
Sbjct: 61  KSVSAMGEYAGSSIRKWWGWGWSWILSKKPPFAQDLEMNEEETRVLGCHNKGSWRHVFYK 120

Query: 49  VKSEFRRLVGSN 14
           V+ E R+LV S+
Sbjct: 121 VRYEVRKLVRSD 132


>ref|XP_002312797.1| predicted protein [Populus trichocarpa] gi|222849205|gb|EEE86752.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  147 bits (372), Expect = 8e-34
 Identities = 74/131 (56%), Positives = 96/131 (73%), Gaps = 2/131 (1%)
 Frame = -2

Query: 403 MSSLKKSFFPSRPLKDSLPLSQ-NSTTDQXXXXXXXXXXXS-VKIQPISSPATSWALRKS 230
           MSS+ +SF   R    +LP+SQ +S+ DQ             +KIQPISSPAT WA ++S
Sbjct: 1   MSSIVQSF-QKRNNSAALPVSQTHSSKDQAVAGLRRRLSSLSLKIQPISSPATQWAFQRS 59

Query: 229 KSMSSLGESAGTSIRKWWDWGWAWILTKKPTFAQDLEMNEEESAMLGSHSKGSWRHVLYK 50
           KS+S++GE AG+S++KWWDWGW+WIL++KP FAQDLEMNEEE+ +LG HSKGSWRHV YK
Sbjct: 60  KSVSAMGEYAGSSVKKWWDWGWSWILSRKPVFAQDLEMNEEETRVLGCHSKGSWRHVFYK 119

Query: 49  VKSEFRRLVGS 17
            +SE  +L  S
Sbjct: 120 FRSEVIKLARS 130


>emb|CAN78386.1| hypothetical protein VITISV_017367 [Vitis vinifera]
          Length = 151

 Score =  143 bits (361), Expect = 2e-32
 Identities = 72/133 (54%), Positives = 92/133 (69%)
 Frame = -2

Query: 403 MSSLKKSFFPSRPLKDSLPLSQNSTTDQXXXXXXXXXXXSVKIQPISSPATSWALRKSKS 224
           MSS+ +SF       + LP+S   + +Q             KIQPI S  +SW   +SKS
Sbjct: 1   MSSIFQSF-----KTNGLPVSHGDSKEQGLRRRLSSFSF--KIQPICSTPSSWRFPRSKS 53

Query: 223 MSSLGESAGTSIRKWWDWGWAWILTKKPTFAQDLEMNEEESAMLGSHSKGSWRHVLYKVK 44
           + S+GE  G+S+RKWWD GWAWIL++KPTFA+DLEMNEEE+ +LG H+KGSWRHV YKV+
Sbjct: 54  LPSMGEFGGSSMRKWWDLGWAWILSRKPTFAKDLEMNEEETVILGCHNKGSWRHVFYKVR 113

Query: 43  SEFRRLVGSNPVG 5
           SE RRLVGS+ VG
Sbjct: 114 SELRRLVGSDRVG 126


>ref|XP_002283053.1| PREDICTED: uncharacterized protein LOC100243457 [Vitis vinifera]
          Length = 151

 Score =  142 bits (359), Expect = 3e-32
 Identities = 72/133 (54%), Positives = 92/133 (69%)
 Frame = -2

Query: 403 MSSLKKSFFPSRPLKDSLPLSQNSTTDQXXXXXXXXXXXSVKIQPISSPATSWALRKSKS 224
           MSS+ +SF       + LP+S   + +Q             KIQPI S  +SW   +SKS
Sbjct: 1   MSSIFQSF-----KANGLPVSHAESKEQGLRRRLSSFSF--KIQPICSTPSSWRFPRSKS 53

Query: 223 MSSLGESAGTSIRKWWDWGWAWILTKKPTFAQDLEMNEEESAMLGSHSKGSWRHVLYKVK 44
           + S+GE  G+S+RKWWD GWAWIL++KPTFA+DLEMNEEE+ +LG H+KGSWRHV YKV+
Sbjct: 54  LPSMGEFGGSSMRKWWDLGWAWILSRKPTFAKDLEMNEEETVILGCHNKGSWRHVFYKVR 113

Query: 43  SEFRRLVGSNPVG 5
           SE RRLVGS+ VG
Sbjct: 114 SELRRLVGSDRVG 126


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