BLASTX nr result
ID: Coptis24_contig00006814
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00006814
(1304 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [... 353 5e-95
emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera] 353 5e-95
ref|XP_002327898.1| predicted protein [Populus trichocarpa] gi|2... 331 3e-88
emb|CBI21907.3| unnamed protein product [Vitis vinifera] 315 2e-83
ref|XP_002517845.1| nucleic acid binding protein, putative [Rici... 314 3e-83
>ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [Vitis vinifera]
Length = 450
Score = 353 bits (906), Expect = 5e-95
Identities = 196/324 (60%), Positives = 239/324 (73%), Gaps = 4/324 (1%)
Frame = -1
Query: 1304 QSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNISNTMNTG 1125
QSDWKAH+KTCGTREY+CDCGTLFSRRDSFITHRAFCDALAEETARVTAASNI+N G
Sbjct: 141 QSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNINN----G 196
Query: 1124 NMNYHLIGTSHGASMVQHFSSIFKPISSNNETIDQTRPGLSLWMDQGSRVGNPISNNLQE 945
+NYH +GTS SM QHFSSIFKPISSN+E DQTR GLSLWM QGS+ + NLQE
Sbjct: 197 TINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQTRRGLSLWMGQGSQGHETMGTNLQE 256
Query: 944 LHQMASGNSV-TVYSDPFAACSNPQQSDHHQLNWMYGNKLSSTNAGE--LTSTSLPIGHN 774
+HQ+ S S +VY+DP +CSNP S +QL+W++G+K SS N + +STSLP+ N
Sbjct: 257 IHQLRSSMSPGSVYADPLVSCSNPPPSS-YQLSWVFGSKQSSNNTEDQLTSSTSLPLS-N 314
Query: 773 IKEVPSPHLVSAPSLFSTHLQPHQQTTSANMSATALLQKAAQIGATSTDPSFLGSSIGMK 594
+KE +VS PSL+S+ H QT NMSATALLQKAAQ+GATS DP FLG S G+K
Sbjct: 315 VKEAAGSQIVSVPSLYSSQHHSH-QTPLGNMSATALLQKAAQMGATSADP-FLG-SFGLK 371
Query: 593 SNNNYVQDGNKYNNALFSLNATSDNIRTDQENSIGDFASWNQLQTHPAKRSRIQKDDTEG 414
+++ VQDGNK+ L++ N N D EN D +++NQLQ +PAKR Q DD+ G
Sbjct: 372 CDSSLVQDGNKF-CGLYTANQLPTN---DMENP-KDLSTFNQLQMYPAKRRNTQNDDSTG 426
Query: 413 EQTRDFLGVGVRTMC-STSMDGWM 345
QTRDFLGVGV+T+C +S++GWM
Sbjct: 427 GQTRDFLGVGVQTICHPSSINGWM 450
>emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera]
Length = 403
Score = 353 bits (906), Expect = 5e-95
Identities = 196/324 (60%), Positives = 239/324 (73%), Gaps = 4/324 (1%)
Frame = -1
Query: 1304 QSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNISNTMNTG 1125
QSDWKAH+KTCGTREY+CDCGTLFSRRDSFITHRAFCDALAEETARVTAASNI+N G
Sbjct: 94 QSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNINN----G 149
Query: 1124 NMNYHLIGTSHGASMVQHFSSIFKPISSNNETIDQTRPGLSLWMDQGSRVGNPISNNLQE 945
+NYH +GTS SM QHFSSIFKPISSN+E DQTR GLSLWM QGS+ + NLQE
Sbjct: 150 TINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQTRRGLSLWMGQGSQGHETMGTNLQE 209
Query: 944 LHQMASGNSV-TVYSDPFAACSNPQQSDHHQLNWMYGNKLSSTNAGE--LTSTSLPIGHN 774
+HQ+ S S +VY+DP +CSNP S +QL+W++G+K SS N + +STSLP+ N
Sbjct: 210 IHQLRSSMSPGSVYADPLVSCSNPPPSS-YQLSWVFGSKQSSNNTEDQLTSSTSLPLS-N 267
Query: 773 IKEVPSPHLVSAPSLFSTHLQPHQQTTSANMSATALLQKAAQIGATSTDPSFLGSSIGMK 594
+KE +VS PSL+S+ H QT NMSATALLQKAAQ+GATS DP FLG S G+K
Sbjct: 268 VKEAAGSQIVSVPSLYSSQHHSH-QTPLGNMSATALLQKAAQMGATSADP-FLG-SFGLK 324
Query: 593 SNNNYVQDGNKYNNALFSLNATSDNIRTDQENSIGDFASWNQLQTHPAKRSRIQKDDTEG 414
+++ VQDGNK+ L++ N N D EN D +++NQLQ +PAKR Q DD+ G
Sbjct: 325 CDSSLVQDGNKF-CGLYTANQLPTN---DMENP-KDLSTFNQLQMYPAKRRNTQNDDSTG 379
Query: 413 EQTRDFLGVGVRTMC-STSMDGWM 345
QTRDFLGVGV+T+C +S++GWM
Sbjct: 380 GQTRDFLGVGVQTICHPSSINGWM 403
>ref|XP_002327898.1| predicted protein [Populus trichocarpa] gi|222837307|gb|EEE75686.1|
predicted protein [Populus trichocarpa]
Length = 479
Score = 331 bits (848), Expect = 3e-88
Identities = 195/332 (58%), Positives = 239/332 (71%), Gaps = 12/332 (3%)
Frame = -1
Query: 1304 QSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNISNTMNTG 1125
QSDWKAHSKTCGTREY+CDCGTLFSRRDSFITHRAFCDALAEETARV A S+I+N + G
Sbjct: 154 QSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEETARVNAVSSINN-LTAG 212
Query: 1124 NMNYHLIGTSHGASMVQHFSSIFKPISSNNETIDQTRP-GLSLWMDQG-SRVGNPI-SNN 954
++NYHL+G G +M QHFSSIFKPISSN+ QTR G+SLWM+QG +V + NN
Sbjct: 213 SINYHLMGNPLGPNMAQHFSSIFKPISSNDH---QTRQGGVSLWMNQGVPQVSEALMGNN 269
Query: 953 LQELHQMASGNSV-TVYSDPFA-ACSNPQQSDHHQLNW-MYGNKLSSTNA-GELTSTSLP 786
+QE+HQ+ S NS ++ D A +CS+ SDH+Q NW ++GNK+SS NA ELTST +
Sbjct: 270 IQEIHQLRSANSSGAMFGDLLAVSCSHAPPSDHYQFNWPVFGNKISSNNAHEELTSTLVL 329
Query: 785 IGHNIKE-VPSPHLVSAPSLFSTHLQPHQQTTSANMSATALLQKAAQIGATSTDPSFLGS 609
N+KE + L S PSL+ST Q QTTSANMSATALLQKAAQIGATSTDPSFLG
Sbjct: 330 PLTNVKEAAAASQLASVPSLYSTQQQQSHQTTSANMSATALLQKAAQIGATSTDPSFLG- 388
Query: 608 SIGMKSNNNYVQDGNKYNNALFSLNATSDNIRTDQENSIGD-FASWNQLQTHPAKRSRIQ 432
S +KSN VQDGNK+ L+ + S N +D ENS D +S NQLQ +P ++ Q
Sbjct: 389 SFALKSNAKKVQDGNKF-CGLYGSSPVSTNPASDVENSGSDQISSLNQLQMYPKRQKIFQ 447
Query: 431 --KDDTEGEQTRDFLGVGVRTMC-STSMDGWM 345
+D G QTRDFLGVGV+ +C +S++GW+
Sbjct: 448 SDQDSPAGGQTRDFLGVGVQAICHPSSINGWI 479
>emb|CBI21907.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 315 bits (806), Expect = 2e-83
Identities = 181/321 (56%), Positives = 218/321 (67%), Gaps = 1/321 (0%)
Frame = -1
Query: 1304 QSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNISNTMNTG 1125
QSDWKAH+KTCGTREY+CDCGTLFSRRDSFITHRAFCDALAEETARVTAASNI+N G
Sbjct: 145 QSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNINN----G 200
Query: 1124 NMNYHLIGTSHGASMVQHFSSIFKPISSNNETIDQTRPGLSLWMDQGSRVGNPISNNLQE 945
+NYH +GTS SM QHFSSIFKPISSN+E DQTR GLSLWM QGS+ + NLQE
Sbjct: 201 TINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQTRRGLSLWMGQGSQGHETMGTNLQE 260
Query: 944 LHQMASGNSVTVYSDPFAACSNPQQSDHHQLNWMYGNKLSSTNAGELTSTSLPIGHNIKE 765
+HQ+ S S G+ ++T +STSLP+ N+KE
Sbjct: 261 IHQLRSSMSP-------------------------GSSSNNTEDQLTSSTSLPLS-NVKE 294
Query: 764 VPSPHLVSAPSLFSTHLQPHQQTTSANMSATALLQKAAQIGATSTDPSFLGSSIGMKSNN 585
+VS PSL+S+ H QT NMSATALLQKAAQ+GATS DP FLG S G+K ++
Sbjct: 295 AAGSQIVSVPSLYSSQHHSH-QTPLGNMSATALLQKAAQMGATSADP-FLG-SFGLKCDS 351
Query: 584 NYVQDGNKYNNALFSLNATSDNIRTDQENSIGDFASWNQLQTHPAKRSRIQKDDTEGEQT 405
+ VQDGNK+ L++ N N D EN D +++NQLQ +PAKR Q DD+ G QT
Sbjct: 352 SLVQDGNKF-CGLYTANQLPTN---DMENP-KDLSTFNQLQMYPAKRRNTQNDDSTGGQT 406
Query: 404 RDFLGVGVRTMC-STSMDGWM 345
RDFLGVGV+T+C +S++GWM
Sbjct: 407 RDFLGVGVQTICHPSSINGWM 427
>ref|XP_002517845.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223542827|gb|EEF44363.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 437
Score = 314 bits (805), Expect = 3e-83
Identities = 194/350 (55%), Positives = 237/350 (67%), Gaps = 30/350 (8%)
Frame = -1
Query: 1304 QSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNISNTMNT- 1128
QSDWKAHSKTCGTREY+CDCGTLFSRRDSFITHRAFCDALAEETARV AASNI+ T
Sbjct: 94 QSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEETARVNAASNINGLAATA 153
Query: 1127 GNMNYHLIGTSHGASMVQHFSSIFKPISSNNE-TIDQTRPGLSLWMDQGSRVGNPISNNL 951
N NYHL+G G +M QHFSSIFKPI SNN+ T+DQTR GLSLWM Q PI+ +
Sbjct: 154 NNFNYHLMGAPIGPNMAQHFSSIFKPIPSNNDHTMDQTRRGLSLWMSQSH---EPIAQEI 210
Query: 950 QELHQMASGNSVTVYSDPFAACSNPQQSDHHQLNW-MYGNKLSSTNA---GELTST--SL 789
+L M S ++ + +CSN +D+H L+W ++G+KLSSTNA ELTST SL
Sbjct: 211 HQLGSMGSSGAIFHHDPLNNSCSNSSPTDYH-LSWPIFGSKLSSTNAHHHEELTSTTSSL 269
Query: 788 PIGHNIKEVPSP-HLVSAPSLFSTHLQPHQQTTSANMSATALLQKAAQIGATSTDPSFLG 612
P+ +N+KE + LVS PSL+ST QP+Q SANMSATALLQKAAQIGATSTDP+FLG
Sbjct: 270 PL-NNVKEAAAAVQLVSVPSLYSTQQQPNQTAPSANMSATALLQKAAQIGATSTDPTFLG 328
Query: 611 SSIGMKS--NNNYVQD--GNKYNNALFSLNATSDN-IRTDQENSIGDFASWNQLQTH--- 456
S G+KS NN+ VQD NK+ ++ N T N I +D + D + NQLQ +
Sbjct: 329 -SFGLKSSTNNSQVQDQGSNKFCGLIYGSNPTITNIIASDHVENNNDISRLNQLQMYMPS 387
Query: 455 --PAKRSRIQKDDTE---------GEQTRDFLGVGV-RTMC-STSMDGWM 345
AKR ++ D + G QTRDFLGVGV + +C TS++GW+
Sbjct: 388 GPVAKRQKLHSHDHDQDTSAAAAVGGQTRDFLGVGVQQAICHPTSINGWI 437