BLASTX nr result

ID: Coptis24_contig00006808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006808
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516621.1| PREDICTED: uncharacterized protein LOC100810...   154   7e-36
ref|XP_003538786.1| PREDICTED: uncharacterized protein LOC100795...   149   2e-34
emb|CAN70108.1| hypothetical protein VITISV_002044 [Vitis vinifera]   149   2e-34
ref|XP_002525284.1| conserved hypothetical protein [Ricinus comm...   145   3e-33
ref|XP_003611559.1| Profilin [Medicago truncatula] gi|355512894|...   144   6e-33

>ref|XP_003516621.1| PREDICTED: uncharacterized protein LOC100810145 [Glycine max]
          Length = 491

 Score =  154 bits (389), Expect = 7e-36
 Identities = 81/156 (51%), Positives = 103/156 (66%), Gaps = 9/156 (5%)
 Frame = -1

Query: 443 SLWVFCLIASFLTAVSA-VDEFSMHVGQNTTLKLSTG--------SRSGAMVVCKRIHIH 291
           S W   L+  + +AV    DE S+ + QN+TL+LS G        S+ GA VV +R+HIH
Sbjct: 11  SAWFLRLLCLWASAVLVFADERSLCLTQNSTLQLSRGLPVGNSPASKPGATVVVERVHIH 70

Query: 290 GLSRPHNLNKFAHSVKVKVRVVDQSPRVRMPNAEVCFHRNVSLGICTCPQSQWEKFIQGS 111
           GLSR  NL KFAHS KVKV  +  +  VR+PN EVCFHRNVSL    CP  QWEK  +GS
Sbjct: 71  GLSRFRNLGKFAHSFKVKVLPLPTNSNVRLPNIEVCFHRNVSLVAGMCPHGQWEKVTKGS 130

Query: 110 WVHSMSPYDNKLLDIRLPGPSVDNLEVLIEEEFLLY 3
           W  SMSP+D+K+LDIR  G +++N EV +EEEF +Y
Sbjct: 131 WARSMSPFDHKILDIRTTGSTLENFEVSVEEEFFVY 166


>ref|XP_003538786.1| PREDICTED: uncharacterized protein LOC100795492 [Glycine max]
          Length = 491

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/156 (49%), Positives = 102/156 (65%), Gaps = 9/156 (5%)
 Frame = -1

Query: 443 SLWVFCLIASFLTAVSA-VDEFSMHVGQNTTLKLSTG--------SRSGAMVVCKRIHIH 291
           S W+  L+  + +AV    DE S+ + QN TL+LS G        S+ GA V+ +R+HIH
Sbjct: 11  SAWILRLLCLWASAVLVFADEHSLCLTQNATLQLSRGLPVGNSPGSKPGATVIVERVHIH 70

Query: 290 GLSRPHNLNKFAHSVKVKVRVVDQSPRVRMPNAEVCFHRNVSLGICTCPQSQWEKFIQGS 111
           GLSR  NL KFAHS+KVKV  +  +  VR+PN EVCFHRNVSL    C   QWEK  +GS
Sbjct: 71  GLSRFRNLGKFAHSIKVKVLPLPTNSNVRLPNIEVCFHRNVSLVAGMCRHGQWEKVTKGS 130

Query: 110 WVHSMSPYDNKLLDIRLPGPSVDNLEVLIEEEFLLY 3
           W  SMS +D+K+LD+R  G +++N EV +EEEF +Y
Sbjct: 131 WARSMSLFDHKILDVRTAGSTLENFEVSVEEEFFVY 166


>emb|CAN70108.1| hypothetical protein VITISV_002044 [Vitis vinifera]
          Length = 607

 Score =  149 bits (377), Expect = 2e-34
 Identities = 81/162 (50%), Positives = 105/162 (64%), Gaps = 13/162 (8%)
 Frame = -1

Query: 449 GFSLWVFCLIASFLT-----AVSAVDEFSMHVGQNTTLKLST--------GSRSGAMVVC 309
           G    +FC++  FLT     +++  +E ++ VGQ+T L++S         GSR G  V+C
Sbjct: 8   GICFLMFCIV--FLTFPIFPSIAFANEHALVVGQSTILQVSPWLAVENSPGSRPGTAVLC 65

Query: 308 KRIHIHGLSRPHNLNKFAHSVKVKVRVVDQSPRVRMPNAEVCFHRNVSLGICTCPQSQWE 129
           +R+ I GLSR  NL KF+HSVKVKV V + S   R+PN EVCFHRN SLGI  CPQ QWE
Sbjct: 66  ERVQIRGLSRIKNLRKFSHSVKVKVSVTNSS--ARLPNVEVCFHRNESLGIGMCPQGQWE 123

Query: 128 KFIQGSWVHSMSPYDNKLLDIRLPGPSVDNLEVLIEEEFLLY 3
           K  +G WV SMSP+D K+LDIR+   S   L++ IEEEF LY
Sbjct: 124 KLTKGPWVRSMSPFDQKVLDIRMAPSSFXTLDLSIEEEFFLY 165


>ref|XP_002525284.1| conserved hypothetical protein [Ricinus communis]
           gi|223535442|gb|EEF37112.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 539

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/156 (45%), Positives = 105/156 (67%), Gaps = 8/156 (5%)
 Frame = -1

Query: 446 FSLWVFCLIASFLTAVSAVDEFSMHVGQNTTLKLST--------GSRSGAMVVCKRIHIH 291
           F + +  L  SF  ++ +  E S+ VG+++ L+LS         G++ G++V+C+R++IH
Sbjct: 13  FIIQILLLTFSFFCSIVSAQERSLVVGESSKLQLSPSLQVFKSPGTKPGSLVLCERVYIH 72

Query: 290 GLSRPHNLNKFAHSVKVKVRVVDQSPRVRMPNAEVCFHRNVSLGICTCPQSQWEKFIQGS 111
           GLSR  NL KF+H++KV +     S  +R PN EVCFHRN SL    CPQ +WEK  +G 
Sbjct: 73  GLSRLKNLQKFSHTLKVTIS--HSSSSLRRPNVEVCFHRNASLATGMCPQGKWEKVDKGP 130

Query: 110 WVHSMSPYDNKLLDIRLPGPSVDNLEVLIEEEFLLY 3
           WV +MSP+D+K+LD+R+ G S++NLE+ IEEEF LY
Sbjct: 131 WVRAMSPFDHKILDVRMAGSSLENLELSIEEEFYLY 166


>ref|XP_003611559.1| Profilin [Medicago truncatula] gi|355512894|gb|AES94517.1| Profilin
           [Medicago truncatula]
          Length = 485

 Score =  144 bits (364), Expect = 6e-33
 Identities = 75/141 (53%), Positives = 96/141 (68%), Gaps = 8/141 (5%)
 Frame = -1

Query: 401 VSAVDEFSMHVGQNTTLKLSTG--------SRSGAMVVCKRIHIHGLSRPHNLNKFAHSV 246
           V A ++ S+ + +NTTL LS G        S+ G  ++ +R+HIHGLSR  NL KFAHSV
Sbjct: 25  VLANEQRSLFIVENTTLPLSRGLPVRNSPGSKPGVTLIVERVHIHGLSRFRNLVKFAHSV 84

Query: 245 KVKVRVVDQSPRVRMPNAEVCFHRNVSLGICTCPQSQWEKFIQGSWVHSMSPYDNKLLDI 66
           KVKV   + +  VR+PN EVCFHRN SL    CPQ QWEK ++GSWV +MSP+D+KLLDI
Sbjct: 85  KVKVFPANSN--VRVPNIEVCFHRNASLATGMCPQGQWEKAVKGSWVRTMSPFDHKLLDI 142

Query: 65  RLPGPSVDNLEVLIEEEFLLY 3
           R  G +++N EV  EEEF  Y
Sbjct: 143 RTAGSTLENFEVSAEEEFFAY 163


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