BLASTX nr result

ID: Coptis24_contig00006735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006735
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245...   140   1e-31
ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|22354271...   137   1e-30
ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|2...   136   3e-30
ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|1...   132   5e-29
ref|NP_001241398.1| uncharacterized protein LOC100813012 precurs...   125   6e-27

>ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245241 [Vitis vinifera]
           gi|298205266|emb|CBI17325.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  140 bits (354), Expect = 1e-31
 Identities = 75/116 (64%), Positives = 88/116 (75%)
 Frame = -2

Query: 608 EQKMELFVTTLTKLFHSLQEAYKGQIVGVLLLNEKPDVELGSKLNVKITSQPSIRLLGEV 429
           +Q +EL +TTL+K+F SLQ AYKGQIVGV+     P       LNV  TSQPS R L E 
Sbjct: 266 QQGVELLLTTLSKMFGSLQVAYKGQIVGVISFTGTPPSS-EKMLNVMFTSQPSARWLAET 324

Query: 428 NNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYSNVKLD 261
            +S D+T I ++ LVR+TLAWITGIIL+ STL+GIYFLLNMPLTRDTLLYSNVKLD
Sbjct: 325 EDSPDLTAIMKIALVRKTLAWITGIILVASTLLGIYFLLNMPLTRDTLLYSNVKLD 380


>ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|223542711|gb|EEF44248.1| PMP,
           putative [Ricinus communis]
          Length = 369

 Score =  137 bits (345), Expect = 1e-30
 Identities = 75/118 (63%), Positives = 90/118 (76%), Gaps = 2/118 (1%)
 Frame = -2

Query: 608 EQKMELFVTTLTKLFHSLQEAYKGQIVGVLLLNEKPDVELGSKLNVKITSQPSIRLLGEV 429
           +Q +EL V TL+K+  S Q AYKGQIVGV++ NE+  +E    LNV  TS PS R L E 
Sbjct: 253 QQGLELLVATLSKMVDSFQVAYKGQIVGVIISNERSTLESEKLLNVMFTSWPSARWLAEA 312

Query: 428 --NNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYSNVKLD 261
             +N+TD T I EV LVR+TLAW+TG+ILL+STL+GIY LLNMPLTRDTLLYSNVKLD
Sbjct: 313 EGSNATD-TAIMEVALVRKTLAWLTGLILLISTLIGIYLLLNMPLTRDTLLYSNVKLD 369


>ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|222845069|gb|EEE82616.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  136 bits (343), Expect = 3e-30
 Identities = 71/116 (61%), Positives = 90/116 (77%)
 Frame = -2

Query: 608 EQKMELFVTTLTKLFHSLQEAYKGQIVGVLLLNEKPDVELGSKLNVKITSQPSIRLLGEV 429
           ++ +EL +TTL+K+F SLQ AYKGQI GV+  N  P  E  + L+V +TSQPS R L E 
Sbjct: 258 QKGLELLLTTLSKMFDSLQTAYKGQIAGVIFFNTAPASESETVLDVMLTSQPSARWLEET 317

Query: 428 NNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYSNVKLD 261
              ++ T IAEV LVR TLAWITGI+L+++TL+GIY+LLNMP+TRDTLLYSNVKLD
Sbjct: 318 KTPSNGT-IAEVALVRMTLAWITGIVLIIATLLGIYYLLNMPITRDTLLYSNVKLD 372


>ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|118488094|gb|ABK95867.1|
           unknown [Populus trichocarpa]
           gi|222842142|gb|EEE79689.1| predicted protein [Populus
           trichocarpa]
          Length = 372

 Score =  132 bits (332), Expect = 5e-29
 Identities = 70/116 (60%), Positives = 87/116 (75%)
 Frame = -2

Query: 608 EQKMELFVTTLTKLFHSLQEAYKGQIVGVLLLNEKPDVELGSKLNVKITSQPSIRLLGEV 429
           ++ +EL +T L+K+F SLQ AYKGQIVG +L N  P  E  + LNV +TS+PS R L E 
Sbjct: 258 QKGLELLITMLSKMFDSLQAAYKGQIVGAILFNTAPAPESKTLLNVMLTSRPSARWLEET 317

Query: 428 NNSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYSNVKLD 261
              T I  IA V LVR TLAWITGI+L+++TL+GIYFL +MPLT+DTLLYSNVKLD
Sbjct: 318 KEPT-IEAIAVVALVRITLAWITGIVLIIATLLGIYFLFSMPLTKDTLLYSNVKLD 372


>ref|NP_001241398.1| uncharacterized protein LOC100813012 precursor [Glycine max]
           gi|255635960|gb|ACU18326.1| unknown [Glycine max]
          Length = 369

 Score =  125 bits (314), Expect = 6e-27
 Identities = 73/116 (62%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
 Frame = -2

Query: 599 MELFVTTLTKLFHSLQEAYKGQIVGVLLLNEKPDVELGSKLNVKITSQ-PSIRLLGEVN- 426
           +EL   TLTK+F SLQEAYKGQIVG++  +     E G K +V  T   P  R L E N 
Sbjct: 258 VELLYATLTKIFSSLQEAYKGQIVGIIYCHVATTQESGKKFDVIFTPHHPYARWLAETNA 317

Query: 425 -NSTDITKIAEVLLVRRTLAWITGIILLLSTLMGIYFLLNMPLTRDTLLYSNVKLD 261
            N+T    + EV+LVRRTLAWITGIILL+STLMGI +LLNMPLTRDTLLYSNVKLD
Sbjct: 318 VNAT----LPEVVLVRRTLAWITGIILLVSTLMGICYLLNMPLTRDTLLYSNVKLD 369


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