BLASTX nr result

ID: Coptis24_contig00006714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006714
         (1774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276262.1| PREDICTED: magnesium-chelatase subunit chlI,...   615   e-174
ref|XP_003543008.1| PREDICTED: magnesium-chelatase subunit chlI,...   599   e-169
ref|XP_003546019.1| PREDICTED: magnesium-chelatase subunit chlI,...   598   e-168
ref|XP_002316838.1| predicted protein [Populus trichocarpa] gi|2...   598   e-168
gb|ABK95697.1| unknown [Populus trichocarpa]                          597   e-168

>ref|XP_002276262.1| PREDICTED: magnesium-chelatase subunit chlI, chloroplastic-like
            [Vitis vinifera]
          Length = 426

 Score =  615 bits (1587), Expect = e-174
 Identities = 323/386 (83%), Positives = 338/386 (87%), Gaps = 2/386 (0%)
 Frame = -2

Query: 1506 GKKFYGGIGILPSKKGRSHFHVA--NVATEATPTEKAQRVAAKGNQRPVYPFAAIVGQDE 1333
            GKK YGG+G+   KKGRS FHVA  NVATE  P EKAQ++AA+ +QRPVYPFAAIVGQDE
Sbjct: 42   GKKLYGGVGV-QLKKGRSQFHVAVSNVATEINPAEKAQKLAAEESQRPVYPFAAIVGQDE 100

Query: 1332 MKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVVYGDPFNSDPEDPESMG 1153
            MKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEI+VV GDPFNSDPEDPESMG
Sbjct: 101  MKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIRVVSGDPFNSDPEDPESMG 160

Query: 1152 MEVRESILRGEELPVATTKITMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKAN 973
            MEVRESIL+GE L +  TKI MVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKAN
Sbjct: 161  MEVRESILKGELLSIVMTKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKAN 220

Query: 972  RGILYXXXXXXXXXXXXXXXXDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQ 793
            RGILY                DSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQ
Sbjct: 221  RGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQ 280

Query: 792  LLDRFGMHAQVGTVRDAELRVKIVEERARFDQNPKEFRTTYEEEQQKLQDQIDSARSALS 613
            LLDRFGMHAQVGTVRDAELRVKIVEERARFD+NPKEFR +Y+ EQ+KLQ QI SARS LS
Sbjct: 281  LLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRDSYKAEQEKLQQQISSARSDLS 340

Query: 612  SVQIDRELRVKISKVCAELNVDGLRGDIVTNRXXXXXXXXKGRDTVSAEDIATVIPNCLR 433
            SVQID +LRVKISKVCAELNVDGLRGDIVTNR        KGRD V+AEDIATVIPNCLR
Sbjct: 341  SVQIDHDLRVKISKVCAELNVDGLRGDIVTNRAAKALAALKGRDNVTAEDIATVIPNCLR 400

Query: 432  HRLRKDPLESIDSGLLVIEKFYEVFS 355
            HRLRKDPLESIDSGLLVIEKFYEVFS
Sbjct: 401  HRLRKDPLESIDSGLLVIEKFYEVFS 426


>ref|XP_003543008.1| PREDICTED: magnesium-chelatase subunit chlI, chloroplastic-like
            [Glycine max] gi|3334150|sp|P93162.1|CHLI_SOYBN RecName:
            Full=Magnesium-chelatase subunit ChlI, chloroplastic;
            Short=Mg-chelatase subunit I-1; AltName:
            Full=Mg-protoporphyrin IX chelatase subunit ChlI; Flags:
            Precursor gi|1732469|dbj|BAA08291.1| Mg chelatase subunit
            (46 kD) [Glycine max]
          Length = 421

 Score =  599 bits (1544), Expect = e-169
 Identities = 312/384 (81%), Positives = 331/384 (86%)
 Frame = -2

Query: 1506 GKKFYGGIGILPSKKGRSHFHVANVATEATPTEKAQRVAAKGNQRPVYPFAAIVGQDEMK 1327
            G+KFYGGIGI    KGR+   V NVATE    E+AQ +A+K +QRPVYPF+AIVGQDEMK
Sbjct: 39   GRKFYGGIGI-HGIKGRAQLSVTNVATEVNSVEQAQSIASKESQRPVYPFSAIVGQDEMK 97

Query: 1326 LCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVVYGDPFNSDPEDPESMGME 1147
            LCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVV GDP+NSDP+DPE MG+E
Sbjct: 98   LCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVVAGDPYNSDPQDPEFMGVE 157

Query: 1146 VRESILRGEELPVATTKITMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRG 967
            VRE +L+GEEL V  TKI MVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRG
Sbjct: 158  VRERVLQGEELSVVLTKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRG 217

Query: 966  ILYXXXXXXXXXXXXXXXXDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLL 787
            ILY                DSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLL
Sbjct: 218  ILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLL 277

Query: 786  DRFGMHAQVGTVRDAELRVKIVEERARFDQNPKEFRTTYEEEQQKLQDQIDSARSALSSV 607
            DRFGMHAQVGTVRDAELRVKIVEER RFD+NPKEFR +Y+ EQ+KLQ QI SARS LSSV
Sbjct: 278  DRFGMHAQVGTVRDAELRVKIVEERGRFDKNPKEFRDSYKAEQEKLQQQITSARSVLSSV 337

Query: 606  QIDRELRVKISKVCAELNVDGLRGDIVTNRXXXXXXXXKGRDTVSAEDIATVIPNCLRHR 427
            QID++L+VKISKVCAELNVDGLRGDIVTNR        KGRD VSAEDIATVIPNCLRHR
Sbjct: 338  QIDQDLKVKISKVCAELNVDGLRGDIVTNRAAKALAALKGRDNVSAEDIATVIPNCLRHR 397

Query: 426  LRKDPLESIDSGLLVIEKFYEVFS 355
            LRKDPLESIDSGLLV EKFYEVFS
Sbjct: 398  LRKDPLESIDSGLLVTEKFYEVFS 421


>ref|XP_003546019.1| PREDICTED: magnesium-chelatase subunit chlI, chloroplastic-like
            [Glycine max]
          Length = 421

 Score =  598 bits (1542), Expect = e-168
 Identities = 313/384 (81%), Positives = 331/384 (86%)
 Frame = -2

Query: 1506 GKKFYGGIGILPSKKGRSHFHVANVATEATPTEKAQRVAAKGNQRPVYPFAAIVGQDEMK 1327
            G+KFYGGIGI    KGRS   VANVATE    E+AQ +A+K +QRPVYPF+AIVGQDEMK
Sbjct: 39   GRKFYGGIGI-HGIKGRSQLSVANVATEVNSVEQAQSIASKESQRPVYPFSAIVGQDEMK 97

Query: 1326 LCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVVYGDPFNSDPEDPESMGME 1147
            LCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVV GDP+NSDP+DPE MG+E
Sbjct: 98   LCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVVAGDPYNSDPQDPEFMGVE 157

Query: 1146 VRESILRGEELPVATTKITMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRG 967
            VRE +L+GEEL V  TKI MVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRG
Sbjct: 158  VRERVLQGEELSVVLTKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRG 217

Query: 966  ILYXXXXXXXXXXXXXXXXDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLL 787
            ILY                DSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLL
Sbjct: 218  ILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLL 277

Query: 786  DRFGMHAQVGTVRDAELRVKIVEERARFDQNPKEFRTTYEEEQQKLQDQIDSARSALSSV 607
            DRFGMHAQVGTVRDAELRVKIVEER RFD+NPKEFR +Y+ EQ+KLQ QI SARS LSSV
Sbjct: 278  DRFGMHAQVGTVRDAELRVKIVEERGRFDKNPKEFRDSYKAEQEKLQQQITSARSVLSSV 337

Query: 606  QIDRELRVKISKVCAELNVDGLRGDIVTNRXXXXXXXXKGRDTVSAEDIATVIPNCLRHR 427
            QID++L+VKISKVCAELNVDGLRGDIVTNR        K RD VSAEDIATVIPNCLRHR
Sbjct: 338  QIDQDLKVKISKVCAELNVDGLRGDIVTNRAAKALAALKERDKVSAEDIATVIPNCLRHR 397

Query: 426  LRKDPLESIDSGLLVIEKFYEVFS 355
            LRKDPLESIDSGLLV EKFYEVFS
Sbjct: 398  LRKDPLESIDSGLLVTEKFYEVFS 421


>ref|XP_002316838.1| predicted protein [Populus trichocarpa] gi|222859903|gb|EEE97450.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  598 bits (1541), Expect = e-168
 Identities = 313/386 (81%), Positives = 336/386 (87%), Gaps = 2/386 (0%)
 Frame = -2

Query: 1506 GKKFYGGIGILPSKKGRSHFHVAN--VATEATPTEKAQRVAAKGNQRPVYPFAAIVGQDE 1333
            G++ YGGIG++  KKGR  FHVA   VAT+    E+AQ++A+K NQRPVYPFAAIVGQDE
Sbjct: 36   GRESYGGIGLV-GKKGRPQFHVAVACVATDIGSVEEAQKLASKENQRPVYPFAAIVGQDE 94

Query: 1332 MKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVVYGDPFNSDPEDPESMG 1153
            MKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVV GDP+NSDPEDPESMG
Sbjct: 95   MKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVVAGDPYNSDPEDPESMG 154

Query: 1152 MEVRESILRGEELPVATTKITMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKAN 973
            +EVRES+++GE L V  TKI MVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKAN
Sbjct: 155  IEVRESVVKGENLTVVMTKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKAN 214

Query: 972  RGILYXXXXXXXXXXXXXXXXDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQ 793
            RGILY                DSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQ
Sbjct: 215  RGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQ 274

Query: 792  LLDRFGMHAQVGTVRDAELRVKIVEERARFDQNPKEFRTTYEEEQQKLQDQIDSARSALS 613
            LLDRFGMHAQVGTVRDAELRVKIVEERARFD+NPKEFR +Y+ EQ+KL+ QI SAR+ LS
Sbjct: 275  LLDRFGMHAQVGTVRDAELRVKIVEERARFDKNPKEFRHSYKAEQEKLRQQIASARACLS 334

Query: 612  SVQIDRELRVKISKVCAELNVDGLRGDIVTNRXXXXXXXXKGRDTVSAEDIATVIPNCLR 433
            SVQID +L+VKISKVCAELNVDGLRGDIVTNR        KGRD V+AEDIATVIPNCLR
Sbjct: 335  SVQIDHDLKVKISKVCAELNVDGLRGDIVTNRAAKSLAALKGRDQVTAEDIATVIPNCLR 394

Query: 432  HRLRKDPLESIDSGLLVIEKFYEVFS 355
            HRLRKDPLESIDSGLLVIEKFYEVFS
Sbjct: 395  HRLRKDPLESIDSGLLVIEKFYEVFS 420


>gb|ABK95697.1| unknown [Populus trichocarpa]
          Length = 417

 Score =  597 bits (1540), Expect = e-168
 Identities = 310/386 (80%), Positives = 337/386 (87%), Gaps = 2/386 (0%)
 Frame = -2

Query: 1506 GKKFYGGIGILPSKKGRSHFHVA--NVATEATPTEKAQRVAAKGNQRPVYPFAAIVGQDE 1333
            G+K+YGGIG++  KKGR  FHVA  +VAT+    ++AQ+ AAK +QRPVYPFAAIVGQDE
Sbjct: 33   GRKYYGGIGLV-GKKGRPQFHVAVASVATDIGSVQEAQKAAAKESQRPVYPFAAIVGQDE 91

Query: 1332 MKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPEIKVVYGDPFNSDPEDPESMG 1153
            MKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRS+VDLLPEIKVV GDP+NSDPEDPESMG
Sbjct: 92   MKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSMVDLLPEIKVVAGDPYNSDPEDPESMG 151

Query: 1152 MEVRESILRGEELPVATTKITMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKAN 973
            +EVRES+++GE+L V  TKI MVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKAN
Sbjct: 152  IEVRESVVKGEDLTVVLTKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKAN 211

Query: 972  RGILYXXXXXXXXXXXXXXXXDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQ 793
            RGILY                DSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQ
Sbjct: 212  RGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQ 271

Query: 792  LLDRFGMHAQVGTVRDAELRVKIVEERARFDQNPKEFRTTYEEEQQKLQDQIDSARSALS 613
            LLDRFGMHAQVGTVRDAELRVKIVEERA+FD+NPKEFR +Y+ EQ+KLQ QI SARS LS
Sbjct: 272  LLDRFGMHAQVGTVRDAELRVKIVEERAQFDKNPKEFRESYKSEQEKLQQQISSARSFLS 331

Query: 612  SVQIDRELRVKISKVCAELNVDGLRGDIVTNRXXXXXXXXKGRDTVSAEDIATVIPNCLR 433
            SV+ID +L+VKISKVC+ELNVDGLRGDIVTNR        KGRD V+AEDIATVIPNCLR
Sbjct: 332  SVKIDHDLKVKISKVCSELNVDGLRGDIVTNRAAKALAALKGRDQVTAEDIATVIPNCLR 391

Query: 432  HRLRKDPLESIDSGLLVIEKFYEVFS 355
            HRLRKDPLESIDSGLLV EKFYEVFS
Sbjct: 392  HRLRKDPLESIDSGLLVSEKFYEVFS 417