BLASTX nr result

ID: Coptis24_contig00006693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006693
         (870 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321119.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-32
emb|CBI39152.3| unnamed protein product [Vitis vinifera]              122   1e-31
ref|XP_002267730.1| PREDICTED: mitochondrial import inner membra...   122   2e-31
ref|XP_003548099.1| PREDICTED: mitochondrial import inner membra...   114   2e-29
ref|NP_001235734.1| uncharacterized protein LOC100527414 precurs...   114   2e-29

>ref|XP_002321119.1| predicted protein [Populus trichocarpa] gi|222861892|gb|EEE99434.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  124 bits (310), Expect(2) = 1e-32
 Identities = 62/81 (76%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
 Frame = -2

Query: 479 ASKSGVAQETIHNTIRRGIKPMTEQEARDILGVTESSSWEEILQKYNTLFERNA-NGSFY 303
           ASKSGVAQET+ NTIRRG K MTEQEAR ILGVTE +SWEEIL+KY+TLFERN+ NGSFY
Sbjct: 32  ASKSGVAQETLQNTIRRGSKVMTEQEARQILGVTEETSWEEILKKYDTLFERNSKNGSFY 91

Query: 302 LQSKIQKAKEYLEAANQGKGQ 240
           +QSK+ +AKE LEA +QGKG+
Sbjct: 92  IQSKVHRAKECLEAVHQGKGE 112



 Score = 43.1 bits (100), Expect(2) = 1e-32
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = -1

Query: 633 MAGRLLGQLIVMGAGILGRAVFKAYRQALS 544
           MAG++L  LIVMG+ ILGRA  +AYRQAL+
Sbjct: 1   MAGKILANLIVMGSAILGRAFIQAYRQALA 30


>emb|CBI39152.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  122 bits (307), Expect(2) = 1e-31
 Identities = 63/81 (77%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
 Frame = -2

Query: 479 ASKSGVAQETIHNTIRRGIKPMTEQEARDILGVTESSSWEEILQKYNTLFERNA-NGSFY 303
           ASKSGVAQETI NT+RRG K M EQEAR ILGVTE S+WEEILQKY+TLFERNA NGSFY
Sbjct: 169 ASKSGVAQETIQNTVRRGSKAMMEQEARQILGVTEQSTWEEILQKYDTLFERNAKNGSFY 228

Query: 302 LQSKIQKAKEYLEAANQGKGQ 240
           LQSK+ +AKE LEA +QG  Q
Sbjct: 229 LQSKVHRAKECLEAVHQGNSQ 249



 Score = 40.4 bits (93), Expect(2) = 1e-31
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = -1

Query: 636 IMAGRLLGQLIVMGAGILGRAVFKAYRQALS 544
           + A ++L  LIVMG+GIL RA+ +AYRQAL+
Sbjct: 137 VQASKILANLIVMGSGILARALVQAYRQALA 167


>ref|XP_002267730.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim16-like [Vitis vinifera]
          Length = 120

 Score =  122 bits (307), Expect(2) = 2e-31
 Identities = 63/81 (77%), Positives = 69/81 (85%), Gaps = 1/81 (1%)
 Frame = -2

Query: 479 ASKSGVAQETIHNTIRRGIKPMTEQEARDILGVTESSSWEEILQKYNTLFERNA-NGSFY 303
           ASKSGVAQETI NT+RRG K M EQEAR ILGVTE S+WEEILQKY+TLFERNA NGSFY
Sbjct: 36  ASKSGVAQETIQNTVRRGSKAMMEQEARQILGVTEQSTWEEILQKYDTLFERNAKNGSFY 95

Query: 302 LQSKIQKAKEYLEAANQGKGQ 240
           LQSK+ +AKE LEA +QG  Q
Sbjct: 96  LQSKVHRAKECLEAVHQGNSQ 116



 Score = 39.7 bits (91), Expect(2) = 2e-31
 Identities = 19/33 (57%), Positives = 25/33 (75%)
 Frame = -1

Query: 642 AIIMAGRLLGQLIVMGAGILGRAVFKAYRQALS 544
           A   A ++L  LIVMG+GIL RA+ +AYRQAL+
Sbjct: 2   ATASASKILANLIVMGSGILARALVQAYRQALA 34


>ref|XP_003548099.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim-16-like [Glycine max]
          Length = 116

 Score =  114 bits (285), Expect(2) = 2e-29
 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
 Frame = -2

Query: 479 ASKSGVAQETIHNTIRRGIKPMTEQEARDILGVTESSSWEEILQKYNTLFERNA-NGSFY 303
           ASK+GVAQETI NTIRR  K MTEQEAR ILGVTE + WEEI++KY+ LFE NA NGSFY
Sbjct: 32  ASKNGVAQETIQNTIRRASKVMTEQEARRILGVTEETPWEEIIKKYDNLFENNAKNGSFY 91

Query: 302 LQSKIQKAKEYLEAANQGKGQ 240
           LQSK+ +AKE LEA  QGK Q
Sbjct: 92  LQSKVHRAKECLEAVQQGKSQ 112



 Score = 42.0 bits (97), Expect(2) = 2e-29
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = -1

Query: 633 MAGRLLGQLIVMGAGILGRAVFKAYRQALS 544
           MA ++L  LIVMG GIL RAV +AYRQAL+
Sbjct: 1   MAAKILANLIVMGGGILARAVVQAYRQALT 30


>ref|NP_001235734.1| uncharacterized protein LOC100527414 precursor [Glycine max]
           gi|255632292|gb|ACU16504.1| unknown [Glycine max]
          Length = 116

 Score =  114 bits (284), Expect(2) = 2e-29
 Identities = 58/81 (71%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
 Frame = -2

Query: 479 ASKSGVAQETIHNTIRRGIKPMTEQEARDILGVTESSSWEEILQKYNTLFERNA-NGSFY 303
           ASK+GVAQETI NT+RR  K MTEQEAR ILGVTE + WEEI++KY+ LFE NA NGSFY
Sbjct: 32  ASKNGVAQETIQNTMRRASKVMTEQEARQILGVTEETPWEEIIKKYDNLFENNAKNGSFY 91

Query: 302 LQSKIQKAKEYLEAANQGKGQ 240
           LQSK+ +AKE LEA  QGK Q
Sbjct: 92  LQSKVHRAKECLEAVQQGKSQ 112



 Score = 42.0 bits (97), Expect(2) = 2e-29
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = -1

Query: 633 MAGRLLGQLIVMGAGILGRAVFKAYRQALS 544
           MA ++L  LIVMG GIL RAV +AYRQAL+
Sbjct: 1   MAAKILANLIVMGGGILARAVVQAYRQALT 30


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