BLASTX nr result
ID: Coptis24_contig00006693
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00006693 (870 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321119.1| predicted protein [Populus trichocarpa] gi|2... 124 1e-32 emb|CBI39152.3| unnamed protein product [Vitis vinifera] 122 1e-31 ref|XP_002267730.1| PREDICTED: mitochondrial import inner membra... 122 2e-31 ref|XP_003548099.1| PREDICTED: mitochondrial import inner membra... 114 2e-29 ref|NP_001235734.1| uncharacterized protein LOC100527414 precurs... 114 2e-29 >ref|XP_002321119.1| predicted protein [Populus trichocarpa] gi|222861892|gb|EEE99434.1| predicted protein [Populus trichocarpa] Length = 116 Score = 124 bits (310), Expect(2) = 1e-32 Identities = 62/81 (76%), Positives = 72/81 (88%), Gaps = 1/81 (1%) Frame = -2 Query: 479 ASKSGVAQETIHNTIRRGIKPMTEQEARDILGVTESSSWEEILQKYNTLFERNA-NGSFY 303 ASKSGVAQET+ NTIRRG K MTEQEAR ILGVTE +SWEEIL+KY+TLFERN+ NGSFY Sbjct: 32 ASKSGVAQETLQNTIRRGSKVMTEQEARQILGVTEETSWEEILKKYDTLFERNSKNGSFY 91 Query: 302 LQSKIQKAKEYLEAANQGKGQ 240 +QSK+ +AKE LEA +QGKG+ Sbjct: 92 IQSKVHRAKECLEAVHQGKGE 112 Score = 43.1 bits (100), Expect(2) = 1e-32 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = -1 Query: 633 MAGRLLGQLIVMGAGILGRAVFKAYRQALS 544 MAG++L LIVMG+ ILGRA +AYRQAL+ Sbjct: 1 MAGKILANLIVMGSAILGRAFIQAYRQALA 30 >emb|CBI39152.3| unnamed protein product [Vitis vinifera] Length = 253 Score = 122 bits (307), Expect(2) = 1e-31 Identities = 63/81 (77%), Positives = 69/81 (85%), Gaps = 1/81 (1%) Frame = -2 Query: 479 ASKSGVAQETIHNTIRRGIKPMTEQEARDILGVTESSSWEEILQKYNTLFERNA-NGSFY 303 ASKSGVAQETI NT+RRG K M EQEAR ILGVTE S+WEEILQKY+TLFERNA NGSFY Sbjct: 169 ASKSGVAQETIQNTVRRGSKAMMEQEARQILGVTEQSTWEEILQKYDTLFERNAKNGSFY 228 Query: 302 LQSKIQKAKEYLEAANQGKGQ 240 LQSK+ +AKE LEA +QG Q Sbjct: 229 LQSKVHRAKECLEAVHQGNSQ 249 Score = 40.4 bits (93), Expect(2) = 1e-31 Identities = 18/31 (58%), Positives = 25/31 (80%) Frame = -1 Query: 636 IMAGRLLGQLIVMGAGILGRAVFKAYRQALS 544 + A ++L LIVMG+GIL RA+ +AYRQAL+ Sbjct: 137 VQASKILANLIVMGSGILARALVQAYRQALA 167 >ref|XP_002267730.1| PREDICTED: mitochondrial import inner membrane translocase subunit tim16-like [Vitis vinifera] Length = 120 Score = 122 bits (307), Expect(2) = 2e-31 Identities = 63/81 (77%), Positives = 69/81 (85%), Gaps = 1/81 (1%) Frame = -2 Query: 479 ASKSGVAQETIHNTIRRGIKPMTEQEARDILGVTESSSWEEILQKYNTLFERNA-NGSFY 303 ASKSGVAQETI NT+RRG K M EQEAR ILGVTE S+WEEILQKY+TLFERNA NGSFY Sbjct: 36 ASKSGVAQETIQNTVRRGSKAMMEQEARQILGVTEQSTWEEILQKYDTLFERNAKNGSFY 95 Query: 302 LQSKIQKAKEYLEAANQGKGQ 240 LQSK+ +AKE LEA +QG Q Sbjct: 96 LQSKVHRAKECLEAVHQGNSQ 116 Score = 39.7 bits (91), Expect(2) = 2e-31 Identities = 19/33 (57%), Positives = 25/33 (75%) Frame = -1 Query: 642 AIIMAGRLLGQLIVMGAGILGRAVFKAYRQALS 544 A A ++L LIVMG+GIL RA+ +AYRQAL+ Sbjct: 2 ATASASKILANLIVMGSGILARALVQAYRQALA 34 >ref|XP_003548099.1| PREDICTED: mitochondrial import inner membrane translocase subunit tim-16-like [Glycine max] Length = 116 Score = 114 bits (285), Expect(2) = 2e-29 Identities = 59/81 (72%), Positives = 66/81 (81%), Gaps = 1/81 (1%) Frame = -2 Query: 479 ASKSGVAQETIHNTIRRGIKPMTEQEARDILGVTESSSWEEILQKYNTLFERNA-NGSFY 303 ASK+GVAQETI NTIRR K MTEQEAR ILGVTE + WEEI++KY+ LFE NA NGSFY Sbjct: 32 ASKNGVAQETIQNTIRRASKVMTEQEARRILGVTEETPWEEIIKKYDNLFENNAKNGSFY 91 Query: 302 LQSKIQKAKEYLEAANQGKGQ 240 LQSK+ +AKE LEA QGK Q Sbjct: 92 LQSKVHRAKECLEAVQQGKSQ 112 Score = 42.0 bits (97), Expect(2) = 2e-29 Identities = 20/30 (66%), Positives = 24/30 (80%) Frame = -1 Query: 633 MAGRLLGQLIVMGAGILGRAVFKAYRQALS 544 MA ++L LIVMG GIL RAV +AYRQAL+ Sbjct: 1 MAAKILANLIVMGGGILARAVVQAYRQALT 30 >ref|NP_001235734.1| uncharacterized protein LOC100527414 precursor [Glycine max] gi|255632292|gb|ACU16504.1| unknown [Glycine max] Length = 116 Score = 114 bits (284), Expect(2) = 2e-29 Identities = 58/81 (71%), Positives = 66/81 (81%), Gaps = 1/81 (1%) Frame = -2 Query: 479 ASKSGVAQETIHNTIRRGIKPMTEQEARDILGVTESSSWEEILQKYNTLFERNA-NGSFY 303 ASK+GVAQETI NT+RR K MTEQEAR ILGVTE + WEEI++KY+ LFE NA NGSFY Sbjct: 32 ASKNGVAQETIQNTMRRASKVMTEQEARQILGVTEETPWEEIIKKYDNLFENNAKNGSFY 91 Query: 302 LQSKIQKAKEYLEAANQGKGQ 240 LQSK+ +AKE LEA QGK Q Sbjct: 92 LQSKVHRAKECLEAVQQGKSQ 112 Score = 42.0 bits (97), Expect(2) = 2e-29 Identities = 20/30 (66%), Positives = 24/30 (80%) Frame = -1 Query: 633 MAGRLLGQLIVMGAGILGRAVFKAYRQALS 544 MA ++L LIVMG GIL RAV +AYRQAL+ Sbjct: 1 MAAKILANLIVMGGGILARAVVQAYRQALT 30