BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006687
         (1322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   640   0.0  
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...   594   e-167
ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-l...   593   e-167
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...   582   e-164
ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-l...   580   e-163

>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
            gi|297744762|emb|CBI38024.3| unnamed protein product
            [Vitis vinifera]
          Length = 477

 Score =  640 bits (1652), Expect = 0.0
 Identities = 312/380 (82%), Positives = 336/380 (88%)
 Frame = -1

Query: 1322 SGRWAPSPAPLSMLFEVESWSSSRDLRGLNQAXXXXXXXXXXXXXXXXXXRKVEPAYSFV 1143
            SGRW PSPAPLS+LFEV+SWSSSRDLR   QA                  RKVEPAYSFV
Sbjct: 97   SGRWIPSPAPLSLLFEVDSWSSSRDLRSGYQASSHRTSFSSSASDNDPPVRKVEPAYSFV 156

Query: 1142 GMHCIFDTCKSSVTVLKFGRMSSDLLAYGASDGTLTVCNVSQPPSIVKELRGHSKDVTDF 963
            GMHCIFD CK+SVTVLKFG  SSDLLAYGA+DGTLTVC VSQPPSI+KELRGHSKDVTDF
Sbjct: 157  GMHCIFDQCKASVTVLKFGNKSSDLLAYGAADGTLTVCTVSQPPSIIKELRGHSKDVTDF 216

Query: 962  DFSSNNQYIASSSMDKTVRVWEISKGHCMRVIYGVSSQLCIRFHPVNNNFLSVGNANREI 783
            DFSSNNQYIASSSMDK+VRVWEISKG C+RVIYG+SSQLCIRFHPVNNNFLS GNANREI
Sbjct: 217  DFSSNNQYIASSSMDKSVRVWEISKGLCIRVIYGISSQLCIRFHPVNNNFLSAGNANREI 276

Query: 782  TVMNFSTGRIINKATFENGITSMDKDHTGQFIFCGDAQGCIYSVTMNSHTGSLSRSHRQR 603
            TV NFSTGR+INKA F++ +T++D DHTGQ IFCGDAQGCIY+V MNS TGSLSRSHR R
Sbjct: 277  TVFNFSTGRVINKAVFDDAVTAVDHDHTGQLIFCGDAQGCIYTVNMNSRTGSLSRSHRNR 336

Query: 602  ISSKRKSPITTVQYRTFSLLARGPVLLACSQDGDLSFFSVALEIKGYLTLRCSLKLAPRV 423
             S+ RKSP+TTVQYR+FSLLARGPVLL C+QDG LSFFSVALEI+GYLT RCSLKL PRV
Sbjct: 337  SSNNRKSPVTTVQYRSFSLLARGPVLLTCTQDGSLSFFSVALEIQGYLTPRCSLKLTPRV 396

Query: 422  HSIRASFCPLLSLEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGE 243
            HSIRASFCPLLSLEKGE+IVAGSEDSNVYFYD TRP+HTCVNKLQGHGSPVIG+AWNHGE
Sbjct: 397  HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPRHTCVNKLQGHGSPVIGVAWNHGE 456

Query: 242  NFLASSDSEGTVIVWKRAKT 183
            N LASSDS+GTVIVWKRAKT
Sbjct: 457  NLLASSDSDGTVIVWKRAKT 476


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
            predicted protein [Populus trichocarpa]
          Length = 508

 Score =  594 bits (1531), Expect = e-167
 Identities = 294/381 (77%), Positives = 319/381 (83%), Gaps = 1/381 (0%)
 Frame = -1

Query: 1322 SGRWAPSPAPLSMLFEVESWSSSRDLRGLNQAXXXXXXXXXXXXXXXXXXRK-VEPAYSF 1146
            SGRW  S  P S LFEV+SW+SSRDLR  N                    R+  EPAYSF
Sbjct: 121  SGRWLQSTTPPSHLFEVDSWTSSRDLRSTNLPSTHRTSFSSTASDNDSLRRRGAEPAYSF 180

Query: 1145 VGMHCIFDTCKSSVTVLKFGRMSSDLLAYGASDGTLTVCNVSQPPSIVKELRGHSKDVTD 966
            VGMHCIFD CK++VTVLKFG MSSDLLAYGASDGTLTVC VS PPS++K+L GHSKDVTD
Sbjct: 181  VGMHCIFDQCKAAVTVLKFGHMSSDLLAYGASDGTLTVCLVSDPPSVIKKLEGHSKDVTD 240

Query: 965  FDFSSNNQYIASSSMDKTVRVWEISKGHCMRVIYGVSSQLCIRFHPVNNNFLSVGNANRE 786
            FDFSSNNQYIAS+SMDKTVRVWE+SKG C+RVIYGVSSQLCIRFHPVNNNFLSVGNANRE
Sbjct: 241  FDFSSNNQYIASASMDKTVRVWELSKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANRE 300

Query: 785  ITVMNFSTGRIINKATFENGITSMDKDHTGQFIFCGDAQGCIYSVTMNSHTGSLSRSHRQ 606
            ITV NFSTGRIINK  F++ +TSMD DHTG  IFCGDAQGC+YS +M+SHTG+LSRSHR 
Sbjct: 301  ITVFNFSTGRIINKLVFDDKVTSMDHDHTGHLIFCGDAQGCVYSTSMDSHTGALSRSHRY 360

Query: 605  RISSKRKSPITTVQYRTFSLLARGPVLLACSQDGDLSFFSVALEIKGYLTLRCSLKLAPR 426
            R S K K P+TTVQYR+FSLLA GPVLL C+QDG LSF+SVALEIKGYLTLRCSLKLAPR
Sbjct: 361  RSSGKSKYPVTTVQYRSFSLLAGGPVLLTCTQDGSLSFYSVALEIKGYLTLRCSLKLAPR 420

Query: 425  VHSIRASFCPLLSLEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHG 246
            VHSIRASFCPLLSLEKGE+IVAGSEDSNVYFYD TRPKHTCVNKLQGH  PV  +AWNHG
Sbjct: 421  VHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVGDVAWNHG 480

Query: 245  ENFLASSDSEGTVIVWKRAKT 183
            EN LA+SD  G VIVWKR KT
Sbjct: 481  ENLLATSDLYGIVIVWKREKT 501


>ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-like [Cucumis sativus]
            gi|449519860|ref|XP_004166952.1| PREDICTED: WD
            repeat-containing protein 13-like [Cucumis sativus]
          Length = 490

 Score =  593 bits (1529), Expect = e-167
 Identities = 290/380 (76%), Positives = 326/380 (85%)
 Frame = -1

Query: 1322 SGRWAPSPAPLSMLFEVESWSSSRDLRGLNQAXXXXXXXXXXXXXXXXXXRKVEPAYSFV 1143
            SGRW P  +PLS+L EVESW+SS+DL    Q+                  R+VE AYSFV
Sbjct: 114  SGRWVPPQSPLSLLHEVESWTSSKDL----QSHRRSSFSSSASDNSQLQTRRVEFAYSFV 169

Query: 1142 GMHCIFDTCKSSVTVLKFGRMSSDLLAYGASDGTLTVCNVSQPPSIVKELRGHSKDVTDF 963
            GMHCIFD CK++V V+KFG MSSDLLAYGASDGTLTVCNVS+P S VK+L GHSKDVTDF
Sbjct: 170  GMHCIFDQCKAAVMVVKFGHMSSDLLAYGASDGTLTVCNVSEPSSSVKQLLGHSKDVTDF 229

Query: 962  DFSSNNQYIASSSMDKTVRVWEISKGHCMRVIYGVSSQLCIRFHPVNNNFLSVGNANREI 783
            DFSSNNQYIASSSMDKTVRVWEISKG C+RVIYGVSSQLCIRFHPVNNNFLSVGNAN+EI
Sbjct: 230  DFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYGVSSQLCIRFHPVNNNFLSVGNANKEI 289

Query: 782  TVMNFSTGRIINKATFENGITSMDKDHTGQFIFCGDAQGCIYSVTMNSHTGSLSRSHRQR 603
            TV NFSTGRI+ K   ++ +TSMD DHTGQ +FCGDA G +YSV+MNSHTG+L+R+HRQ 
Sbjct: 290  TVFNFSTGRIVTKLVLDSEVTSMDHDHTGQLLFCGDANGYVYSVSMNSHTGALTRTHRQW 349

Query: 602  ISSKRKSPITTVQYRTFSLLARGPVLLACSQDGDLSFFSVALEIKGYLTLRCSLKLAPRV 423
             SS+RKSP++TVQYR+FSLLAR PVLL C+QDG+LSFFS+ALE++GYLTLRCSLKLAPR+
Sbjct: 350  CSSRRKSPVSTVQYRSFSLLARSPVLLTCTQDGNLSFFSIALEVQGYLTLRCSLKLAPRI 409

Query: 422  HSIRASFCPLLSLEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHGE 243
            HSIRASFCPLLSLEKGE+IVAGSEDSNVYFYD TRPKHTCVNKLQGH  PVIG+AWNHGE
Sbjct: 410  HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVIGVAWNHGE 469

Query: 242  NFLASSDSEGTVIVWKRAKT 183
            N LASSD  GTVIVWKR+KT
Sbjct: 470  NLLASSDFYGTVIVWKRSKT 489


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
            gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 500

 Score =  582 bits (1499), Expect = e-164
 Identities = 291/386 (75%), Positives = 321/386 (83%), Gaps = 1/386 (0%)
 Frame = -1

Query: 1322 SGRWAPSPAP-LSMLFEVESWSSSRDLRGLNQAXXXXXXXXXXXXXXXXXXRKVEPAYSF 1146
            SGRW   P+P LS +F+ ESWSSSR+L G   +                  R VEPAYSF
Sbjct: 115  SGRWLQCPSPPLSHMFDAESWSSSRNLSGNLASTHRTSFSSSVSDNDRPRRRGVEPAYSF 174

Query: 1145 VGMHCIFDTCKSSVTVLKFGRMSSDLLAYGASDGTLTVCNVSQPPSIVKELRGHSKDVTD 966
            VGMHCIFD CKS+VTVLKFG MSS+LLAYGASDG+LTVC VS+PPS++K+L+GHSKDVTD
Sbjct: 175  VGMHCIFDQCKSAVTVLKFGHMSSNLLAYGASDGSLTVCTVSEPPSVLKQLKGHSKDVTD 234

Query: 965  FDFSSNNQYIASSSMDKTVRVWEISKGHCMRVIYGVSSQLCIRFHPVNNNFLSVGNANRE 786
            FDFSSNNQYIASSSMDKTVRVWE+S+G C+RVIYGVSSQ CIRFHPVNNNFLS GN N+E
Sbjct: 235  FDFSSNNQYIASSSMDKTVRVWELSQGLCIRVIYGVSSQFCIRFHPVNNNFLSAGNENKE 294

Query: 785  ITVMNFSTGRIINKATFENGITSMDKDHTGQFIFCGDAQGCIYSVTMNSHTGSLSRSHRQ 606
            ITV NFSTGRII+KA F+  ITSMD DHTGQ IFCGD QG IY V+M+SHTG LSRSHR 
Sbjct: 295  ITVFNFSTGRIIHKAGFDAKITSMDHDHTGQLIFCGDGQGSIYCVSMDSHTGMLSRSHRH 354

Query: 605  RISSKRKSPITTVQYRTFSLLARGPVLLACSQDGDLSFFSVALEIKGYLTLRCSLKLAPR 426
            R   K KSP+TTVQYR+FSLLA GPVLL C+QDG+LSFFSVALEI+GYLTLRCSLKLAPR
Sbjct: 355  R--GKSKSPVTTVQYRSFSLLAGGPVLLTCTQDGNLSFFSVALEIQGYLTLRCSLKLAPR 412

Query: 425  VHSIRASFCPLLSLEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNHG 246
            VHSIRASFCPLLSLEKGE+IV GSEDSNVYFYD TRP+HTCVNKLQGH  PVIG+AWNHG
Sbjct: 413  VHSIRASFCPLLSLEKGEYIVVGSEDSNVYFYDLTRPRHTCVNKLQGHRFPVIGVAWNHG 472

Query: 245  ENFLASSDSEGTVIVWKRAKTG*YNY 168
            EN LASSD  G VIVWKRAK+    Y
Sbjct: 473  ENLLASSDLYGIVIVWKRAKSSSNKY 498


>ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 553

 Score =  580 bits (1494), Expect = e-163
 Identities = 286/382 (74%), Positives = 320/382 (83%), Gaps = 2/382 (0%)
 Frame = -1

Query: 1322 SGRWAPSPAPLSMLF-EVESWSSSRDLRGLNQAXXXXXXXXXXXXXXXXXXRK-VEPAYS 1149
            SGRW PSP P    + EV+S SS RDL+  N                     + VE AYS
Sbjct: 119  SGRWFPSPTPHGTRWSEVDSLSSGRDLQNANPVYNHRTSFGSSVSDSDRPRHRGVEAAYS 178

Query: 1148 FVGMHCIFDTCKSSVTVLKFGRMSSDLLAYGASDGTLTVCNVSQPPSIVKELRGHSKDVT 969
            FVGMHCIFD CK+SVTVLKFG MSSDLLAYGASDGTLTVC+VS+ PS++K+L GHSKDVT
Sbjct: 179  FVGMHCIFDQCKASVTVLKFGHMSSDLLAYGASDGTLTVCSVSENPSVIKQLNGHSKDVT 238

Query: 968  DFDFSSNNQYIASSSMDKTVRVWEISKGHCMRVIYGVSSQLCIRFHPVNNNFLSVGNANR 789
            DFDF+SNNQYIASSS+DKTVRVWEI+KG C+RVIYGVSSQLCIRFHPVNNNFLSVGNAN+
Sbjct: 239  DFDFTSNNQYIASSSLDKTVRVWEIAKGICIRVIYGVSSQLCIRFHPVNNNFLSVGNANK 298

Query: 788  EITVMNFSTGRIINKATFENGITSMDKDHTGQFIFCGDAQGCIYSVTMNSHTGSLSRSHR 609
            EI V NFSTGR+IN++ F++ +TSMD DHTG  +FCGDAQGCIYSV MNSHTG LSRSHR
Sbjct: 299  EINVFNFSTGRVINRSIFDSEVTSMDHDHTGHLLFCGDAQGCIYSVNMNSHTGVLSRSHR 358

Query: 608  QRISSKRKSPITTVQYRTFSLLARGPVLLACSQDGDLSFFSVALEIKGYLTLRCSLKLAP 429
             R SS+ KS +TTVQYR+FSLLARGPVLL C+QDG+LSFFSVALEIKGYLTLRCSLKLAP
Sbjct: 359  YRSSSRHKSAVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLAP 418

Query: 428  RVHSIRASFCPLLSLEKGEFIVAGSEDSNVYFYDFTRPKHTCVNKLQGHGSPVIGIAWNH 249
            R+H I+ASFCPLLSLEKGEFIVAGSEDSNVYFYD T+PK+TCVNKLQGH  PV+GIAWNH
Sbjct: 419  RIHKIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTKPKNTCVNKLQGHRFPVMGIAWNH 478

Query: 248  GENFLASSDSEGTVIVWKRAKT 183
            GEN LASSD  G VIVWKR ++
Sbjct: 479  GENLLASSDFYGIVIVWKRERS 500