BLASTX nr result

ID: Coptis24_contig00006683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006683
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]   502   e-140
ref|XP_002274039.1| PREDICTED: probable calcium-activated outwar...   501   e-139
ref|XP_002515189.1| Calcium-activated outward-rectifying potassi...   496   e-138
ref|XP_002302805.1| outward rectifying potassium channel [Populu...   483   e-134
ref|XP_002320260.1| outward rectifying potassium channel [Populu...   480   e-133

>emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]
          Length = 390

 Score =  502 bits (1293), Expect = e-140
 Identities = 258/360 (71%), Positives = 298/360 (82%), Gaps = 1/360 (0%)
 Frame = -2

Query: 1538 PTPTQDEQLISEEIKDPFLERSSSVPKTLHGHGGPKKTSYLHRSKTAPAMAVMKDLKQNT 1359
            P    +  + +++I+DP     S+       H  P+KT  +HR KTAPA+AVM+D K   
Sbjct: 38   PFNISEPTISNQDIRDPCAPGPSTT------HFLPRKT--IHRCKTAPALAVMRDAKSQ- 88

Query: 1358 PDQVDKPKNESVSVIRQXXXXXXXXXXXXXLIYSFNRDNFSGVETHPVIDALYFCIVTMC 1179
            P Q+ KP ++S S+IRQ             +IYSFNRDNFSG+ETH V+DALYFCIVTMC
Sbjct: 89   PAQLPKPNSDSTSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTMC 148

Query: 1178 TIGYGDIAPLTPGTKLFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTSIQVGGNRRG 999
            TIGYGDIAPLTP TK+FACVFVLVGFGFIDILLSGVVNYVLDLQENMILT IQVGG   G
Sbjct: 149  TIGYGDIAPLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQVGGAPAG 208

Query: 998  -FSAKNYIFDVQKGRMRIRMKVALALGVVVTSIGIGSLVLYFLEDLDWVDAIYLSVMSVT 822
             FSA+NYI DV+KGRMRIR+KV LALGVVV  IG+G++VLYF+E+LDW+DA+YLSVMSVT
Sbjct: 209  GFSARNYIVDVEKGRMRIRLKVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVT 268

Query: 821  TVGYGDRAFKTLVGRLFASVWLLFSTLAVARAFLYLAEARIDKRHRRIMKYVLQREITVQ 642
            TVGYGDRAFKTL GRLFA++WLLFSTLAVARAFLYLAEARIDKRHRRI K+VL REITV+
Sbjct: 269  TVGYGDRAFKTLPGRLFAAIWLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVE 328

Query: 641  DLLAADVNNHGFISKSEYVLYKLKEMGKINDKDIVLICNQFNKLDPNNSGKITLPDLLES 462
            DLLAAD+NN+GFISKSEYV+YKLKEMGKI + D++ ICNQFNKLDPNNSGKITLPDLLE+
Sbjct: 329  DLLAADINNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLLEN 388


>ref|XP_002274039.1| PREDICTED: probable calcium-activated outward-rectifying potassium
            channel 5, chloroplastic [Vitis vinifera]
          Length = 390

 Score =  501 bits (1289), Expect = e-139
 Identities = 257/360 (71%), Positives = 298/360 (82%), Gaps = 1/360 (0%)
 Frame = -2

Query: 1538 PTPTQDEQLISEEIKDPFLERSSSVPKTLHGHGGPKKTSYLHRSKTAPAMAVMKDLKQNT 1359
            P    +  + +++I+DP     S+       H  P+KT  +HR KTAPA+AVM+D K   
Sbjct: 38   PFNISEPTISNQDIRDPCAPGPSTT------HFLPRKT--IHRCKTAPALAVMRDAKSQ- 88

Query: 1358 PDQVDKPKNESVSVIRQXXXXXXXXXXXXXLIYSFNRDNFSGVETHPVIDALYFCIVTMC 1179
            P Q+ KP ++S S+IRQ             +IYSFNRDNFSG+ETH V+DALYFCIVTMC
Sbjct: 89   PAQLPKPNSDSTSIIRQAFFLLFLYLSLGVVIYSFNRDNFSGIETHAVVDALYFCIVTMC 148

Query: 1178 TIGYGDIAPLTPGTKLFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTSIQVGGNRRG 999
            TIGYGDIAPLTP TK+FACVFVLVGFGFIDILLSGVVNYVLDLQENMILT IQVGG   G
Sbjct: 149  TIGYGDIAPLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTGIQVGGAPAG 208

Query: 998  -FSAKNYIFDVQKGRMRIRMKVALALGVVVTSIGIGSLVLYFLEDLDWVDAIYLSVMSVT 822
             FSA+NYI DV+KGRMRIR+KV LALGVVV  IG+G++VLYF+E+LDW+DA+YLSVMSVT
Sbjct: 209  GFSARNYIVDVEKGRMRIRLKVGLALGVVVLCIGMGTMVLYFVENLDWIDAVYLSVMSVT 268

Query: 821  TVGYGDRAFKTLVGRLFASVWLLFSTLAVARAFLYLAEARIDKRHRRIMKYVLQREITVQ 642
            +VGYGDRAFKTL GRLFA++WLLFSTLAVARAFLYLAEARIDKRHRRI K+VL REITV+
Sbjct: 269  SVGYGDRAFKTLPGRLFAAIWLLFSTLAVARAFLYLAEARIDKRHRRITKWVLHREITVE 328

Query: 641  DLLAADVNNHGFISKSEYVLYKLKEMGKINDKDIVLICNQFNKLDPNNSGKITLPDLLES 462
            DLLAAD+NN+GFISKSEYV+YKLKEMGKI + D++ ICNQFNKLDPNNSGKITLPDLLE+
Sbjct: 329  DLLAADINNNGFISKSEYVIYKLKEMGKIAENDVLQICNQFNKLDPNNSGKITLPDLLEN 388


>ref|XP_002515189.1| Calcium-activated outward-rectifying potassium channel, putative
            [Ricinus communis] gi|223545669|gb|EEF47173.1|
            Calcium-activated outward-rectifying potassium channel,
            putative [Ricinus communis]
          Length = 390

 Score =  496 bits (1276), Expect = e-138
 Identities = 259/368 (70%), Positives = 298/368 (80%), Gaps = 4/368 (1%)
 Frame = -2

Query: 1550 ISNTPTPTQDEQLISEEIKD-PFLERSSSVPKTLHGHGGPKKTSYLHRSKTAPAMAVMKD 1374
            +S T +P+    ++  EI++ P        P T       KK   LHRSKTAPAM VM+D
Sbjct: 28   LSFTLSPSLSSPILFSEIQEQPVSTAILGAPSTQR-----KKPGSLHRSKTAPAMVVMRD 82

Query: 1373 LKQNTPDQVDKPKNESVSVIRQXXXXXXXXXXXXXLIYSFNRDNFSGVETHPVIDALYFC 1194
            LK   P Q  KP++ES S+IRQ             +IYSFNRDNFSG+ETHPV+DALYFC
Sbjct: 83   LKP-LPPQDPKPQSESSSIIRQAIFLLFLYLLLGVVIYSFNRDNFSGIETHPVVDALYFC 141

Query: 1193 IVTMCTIGYGDIAPLTPGTKLFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTSIQVG 1014
            IVTMCTIGYGDIAPLTP TK+FACVFVLVGFGFIDILLSGVVNYVLDLQE+MIL  IQ+G
Sbjct: 142  IVTMCTIGYGDIAPLTPATKVFACVFVLVGFGFIDILLSGVVNYVLDLQESMILAGIQMG 201

Query: 1013 GNR---RGFSAKNYIFDVQKGRMRIRMKVALALGVVVTSIGIGSLVLYFLEDLDWVDAIY 843
             NR    GFSA+NYI DV+KGRMRIR+KV LALGVVV  IGIG+LVLY+LEDLD +D+IY
Sbjct: 202  NNRTAHEGFSARNYIVDVEKGRMRIRLKVGLALGVVVLCIGIGTLVLYYLEDLDCIDSIY 261

Query: 842  LSVMSVTTVGYGDRAFKTLVGRLFASVWLLFSTLAVARAFLYLAEARIDKRHRRIMKYVL 663
            L+VMSVTTVGYGDR FKTL GRLFA++WLL S+LAVARAFLYLAEARIDKRHRRI K+VL
Sbjct: 262  LAVMSVTTVGYGDRVFKTLPGRLFAAIWLLVSSLAVARAFLYLAEARIDKRHRRITKWVL 321

Query: 662  QREITVQDLLAADVNNHGFISKSEYVLYKLKEMGKINDKDIVLICNQFNKLDPNNSGKIT 483
             R+ITV+DL+AAD+NN+GFISKSEYV+YKLKEMGKI +KDI+ ICNQF+KLDPNN GKIT
Sbjct: 322  HRDITVEDLIAADINNNGFISKSEYVIYKLKEMGKIGEKDILQICNQFSKLDPNNLGKIT 381

Query: 482  LPDLLESR 459
            LPDLLE+R
Sbjct: 382  LPDLLENR 389


>ref|XP_002302805.1| outward rectifying potassium channel [Populus trichocarpa]
            gi|222844531|gb|EEE82078.1| outward rectifying potassium
            channel [Populus trichocarpa]
          Length = 379

 Score =  483 bits (1243), Expect = e-134
 Identities = 254/371 (68%), Positives = 297/371 (80%), Gaps = 2/371 (0%)
 Frame = -2

Query: 1565 EAQAFISNTPTPTQDEQLISEEIKDPFLERSSSVPKTLHGHGGPKKTSYLHRSKTAPAMA 1386
            E Q FI  T T +    L+  EI+D   E ++  P     +   KK   LHRSKTAPAM 
Sbjct: 14   EPQPFI--TLTQSLSTPLLFHEIQD---EPTTPSPPPGPSNTRFKKPGTLHRSKTAPAMV 68

Query: 1385 VMKDLKQNTPDQVDKPKNESVSVIRQXXXXXXXXXXXXXLIYSFNRDNFSGVETHPVIDA 1206
            VM++ +   P Q+ KP++ES S+IRQ             +IYSFN D+FSG ETHPV+DA
Sbjct: 69   VMREFQPTKP-QIPKPQSESNSIIRQAIFLLSLYLLLGVVIYSFNTDHFSGTETHPVVDA 127

Query: 1205 LYFCIVTMCTIGYGDIAPLTPGTKLFACVFVLVGFGFIDILLSGVVNYVLDLQENMILTS 1026
            LYFCIVTMCTIGYGDIAPLTP TK+FACVFVLVGFGFIDILLSG+VNYVLDLQE+MILT 
Sbjct: 128  LYFCIVTMCTIGYGDIAPLTPVTKVFACVFVLVGFGFIDILLSGLVNYVLDLQESMILTG 187

Query: 1025 IQVGGNRR--GFSAKNYIFDVQKGRMRIRMKVALALGVVVTSIGIGSLVLYFLEDLDWVD 852
            I++  NR   GFSA +YI DV+KGRMRIR+KV LALGVV+  IGIG+LVLYFLEDLDW+D
Sbjct: 188  IEMSKNRNREGFSAADYIIDVKKGRMRIRLKVGLALGVVILCIGIGTLVLYFLEDLDWID 247

Query: 851  AIYLSVMSVTTVGYGDRAFKTLVGRLFASVWLLFSTLAVARAFLYLAEARIDKRHRRIMK 672
            ++YL+VMSVTTVGYGDRAFK+L GRLFA++WLL STLAVARAFLYLAEARIDKRHRRI  
Sbjct: 248  SVYLAVMSVTTVGYGDRAFKSLPGRLFAAIWLLVSTLAVARAFLYLAEARIDKRHRRISN 307

Query: 671  YVLQREITVQDLLAADVNNHGFISKSEYVLYKLKEMGKINDKDIVLICNQFNKLDPNNSG 492
            +VL R+ITV+DLLAAD+NN+GFISKSEYV+YKLKEMGKI +KD++ ICNQF+KLDPNN G
Sbjct: 308  WVLHRDITVEDLLAADMNNNGFISKSEYVIYKLKEMGKIGEKDVLQICNQFSKLDPNNLG 367

Query: 491  KITLPDLLESR 459
            KITLPDLL  R
Sbjct: 368  KITLPDLLGHR 378


>ref|XP_002320260.1| outward rectifying potassium channel [Populus trichocarpa]
            gi|222861033|gb|EEE98575.1| outward rectifying potassium
            channel [Populus trichocarpa]
          Length = 318

 Score =  480 bits (1235), Expect = e-133
 Identities = 241/319 (75%), Positives = 276/319 (86%), Gaps = 2/319 (0%)
 Frame = -2

Query: 1418 LHRSKTAPAMAVMKDLKQNTPDQVDKPKNESVSVIRQXXXXXXXXXXXXXLIYSFNRDNF 1239
            LHR KTAPAM VM++ +   P Q+ KP+ +S S+IRQ             +IYSFN D+F
Sbjct: 1    LHRCKTAPAMVVMREFQPTKP-QIPKPQPDSTSIIRQATFLLSMYLLLGVIIYSFNTDHF 59

Query: 1238 SGVETHPVIDALYFCIVTMCTIGYGDIAPLTPGTKLFACVFVLVGFGFIDILLSGVVNYV 1059
            SG+ETHPV+DALYFCIVTMCTIGYGDI PLTP TK+FACVFVLVGFGFIDILLSG+VNYV
Sbjct: 60   SGIETHPVVDALYFCIVTMCTIGYGDITPLTPVTKVFACVFVLVGFGFIDILLSGLVNYV 119

Query: 1058 LDLQENMILTSIQVGGNRR--GFSAKNYIFDVQKGRMRIRMKVALALGVVVTSIGIGSLV 885
            LDLQE+MILT I++G NR   GFSA +YIFDV+KGRMRIR+KV LALGVVV  IGIG+LV
Sbjct: 120  LDLQESMILTGIEMGKNRNHEGFSATDYIFDVKKGRMRIRLKVGLALGVVVLCIGIGTLV 179

Query: 884  LYFLEDLDWVDAIYLSVMSVTTVGYGDRAFKTLVGRLFASVWLLFSTLAVARAFLYLAEA 705
            LYFLEDLDW+D++YL+VMSVTTVGYGDRAFKTL GRLFA++WLL STLAVARAFLYLAEA
Sbjct: 180  LYFLEDLDWIDSVYLAVMSVTTVGYGDRAFKTLPGRLFAAIWLLVSTLAVARAFLYLAEA 239

Query: 704  RIDKRHRRIMKYVLQREITVQDLLAADVNNHGFISKSEYVLYKLKEMGKINDKDIVLICN 525
            RIDKRHRRI  +VL R+ITV+DLLAAD+NN+GFISKSEYV+YKLKEMGKI +KDI+ ICN
Sbjct: 240  RIDKRHRRITNWVLHRDITVEDLLAADMNNNGFISKSEYVIYKLKEMGKIGEKDILQICN 299

Query: 524  QFNKLDPNNSGKITLPDLL 468
            QF+KLDPNN GKITLPDLL
Sbjct: 300  QFSKLDPNNLGKITLPDLL 318


Top