BLASTX nr result

ID: Coptis24_contig00006668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006668
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635503.1| PREDICTED: nuclear transcription factor Y su...   231   2e-58
emb|CAM35799.1| leafy cotyledon1-like protein [Theobroma cacao]       229   5e-58
gb|ADC33213.1| leafy cotyledon 1-B [Arachis hypogaea]                 227   3e-57
gb|ADC33212.1| leafy cotyledon 1-A [Arachis hypogaea]                 223   6e-56
gb|ADD82425.2| leafy cotyledon1-like protein [Dimocarpus longan]...   221   1e-55

>ref|XP_003635503.1| PREDICTED: nuclear transcription factor Y subunit B-6-like [Vitis
           vinifera] gi|296083539|emb|CBI23532.3| unnamed protein
           product [Vitis vinifera]
          Length = 211

 Score =  231 bits (588), Expect = 2e-58
 Identities = 112/174 (64%), Positives = 135/174 (77%)
 Frame = -1

Query: 821 SANNNDENSTCTVREQDRFLPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITS 642
           S N+  E++ CTVREQDRF+PIANVIRIMR+ILP HAKISDDAKETIQECVSEYISFIT 
Sbjct: 35  SNNSAMEDTECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITG 94

Query: 641 EANERCQCEQRKTITAEDVLWAMGKLGFDEYIAPLTLFLHRYREFEGDRGSIRGDPLAKR 462
           EANERCQ EQRKTITAEDVLWAM KLGFD+Y+ PLT++LHRYRE EGDR +IR +P+ KR
Sbjct: 95  EANERCQREQRKTITAEDVLWAMSKLGFDDYMEPLTMYLHRYRELEGDRATIRSEPVVKR 154

Query: 461 TMEMAPLVAAAYGPPFHVAPHQGILTPPMANGFVKDGVNMNSAHQPSMACFDPY 300
            +E   L  AA+ P FH+  HQG        G++K+  N  ++ Q ++A  +PY
Sbjct: 155 NVEFGGLSVAAFAPAFHMGHHQGFFGAAAMGGYLKEAPNAGTS-QAAVASLEPY 207


>emb|CAM35799.1| leafy cotyledon1-like protein [Theobroma cacao]
          Length = 213

 Score =  229 bits (585), Expect = 5e-58
 Identities = 114/174 (65%), Positives = 137/174 (78%), Gaps = 1/174 (0%)
 Frame = -1

Query: 815 NNNDENSTCTVREQDRFLPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITSEA 636
           ++N +++ CTVREQDRF+PIANVIRIMR+ILP HAKISDDAKETIQECVSEYISFIT EA
Sbjct: 38  HSNSDDNECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEA 97

Query: 635 NERCQCEQRKTITAEDVLWAMGKLGFDEYIAPLTLFLHRYREFEGDRGSIRGDPLAKRTM 456
           NERCQ EQRKT TAEDVLWAM KLGFD+YI PLT++LHRYRE EG+RGSIRG+PL KR +
Sbjct: 98  NERCQREQRKTTTAEDVLWAMSKLGFDDYIEPLTVYLHRYRELEGERGSIRGEPLGKRAV 157

Query: 455 EMAPLVAAAYGPPFHVAPHQGILTPPMA-NGFVKDGVNMNSAHQPSMACFDPYG 297
           +   L  AA+ P FH+  H G      A  G++KD  N  S+ Q ++A  +P+G
Sbjct: 158 DYGALSVAAFAPAFHMGHHHGFFGGGGAMGGYLKDASNAGSS-QAAVANGEPFG 210


>gb|ADC33213.1| leafy cotyledon 1-B [Arachis hypogaea]
          Length = 225

 Score =  227 bits (578), Expect = 3e-57
 Identities = 118/183 (64%), Positives = 140/183 (76%), Gaps = 10/183 (5%)
 Frame = -1

Query: 821 SANNNDENSTCTVREQDRFLPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITS 642
           S NN+ +++ CTVREQDRF+PIANVIRIMR+ILP HAKISDDAKETIQECVSEYISFIT 
Sbjct: 39  SNNNHTDDNECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITG 98

Query: 641 EANERCQCEQRKTITAEDVLWAMGKLGFDEYIAPLTLFLHRYREFEGDRGSIRGDPLAKR 462
           EANERCQ EQRKTITAEDVLWAM KLGFD+YI PLT++LHRYRE EGDR S+RG+PL KR
Sbjct: 99  EANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRGEPLGKR 158

Query: 461 TMEMAPL---VAAAYGPPFHVAPHQGILTP------PMANGFVKDGVNMNSAHQ-PSMAC 312
           T++   L    A+ + PPFH+  H     P      PM N +++D  N  S+ Q PS+A 
Sbjct: 159 TVDYGTLGVAAASTFVPPFHIGHHHHHPHPSSYYGTPMGN-YIRDAPNAGSSLQPPSLAH 217

Query: 311 FDP 303
            +P
Sbjct: 218 AEP 220


>gb|ADC33212.1| leafy cotyledon 1-A [Arachis hypogaea]
          Length = 226

 Score =  223 bits (567), Expect = 6e-56
 Identities = 115/181 (63%), Positives = 137/181 (75%), Gaps = 10/181 (5%)
 Frame = -1

Query: 815 NNNDENSTCTVREQDRFLPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITSEA 636
           N + +++ CTVREQDRF+PIANVIRIMR+ILP HAKISDDAKETIQECVSEYISFIT EA
Sbjct: 42  NTHTDDNECTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQECVSEYISFITGEA 101

Query: 635 NERCQCEQRKTITAEDVLWAMGKLGFDEYIAPLTLFLHRYREFEGDRGSIRGDPLAKRTM 456
           NERCQ EQRKTITAEDVLWAM KLGFD+YI PLT++LHRYRE EGDR S+RG+PL KRT+
Sbjct: 102 NERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTMYLHRYRELEGDRTSMRGEPLGKRTV 161

Query: 455 EMAPL---VAAAYGPPFHVAPH------QGILTPPMANGFVKDGVNMNSAHQ-PSMACFD 306
           +   L     +A+ P FH+  H       G    PM N +++D  N  S+ Q PS+A  +
Sbjct: 162 DYGTLGVAATSAFVPQFHIGHHHHHPRPSGYYGTPMGN-YIRDASNAGSSLQPPSLAYAE 220

Query: 305 P 303
           P
Sbjct: 221 P 221


>gb|ADD82425.2| leafy cotyledon1-like protein [Dimocarpus longan]
           gi|301323235|gb|ADK70389.1| leafy cotyledon1-like
           protein [Dimocarpus longan]
          Length = 222

 Score =  221 bits (564), Expect = 1e-55
 Identities = 117/175 (66%), Positives = 135/175 (77%), Gaps = 6/175 (3%)
 Frame = -1

Query: 839 SVKLSESAN----NNDENSTCTVREQDRFLPIANVIRIMRRILPSHAKISDDAKETIQEC 672
           ++KLSE +N    N+ +++ CTVREQDRF+PIANVIRIMR+ILP HAKISDDAKETIQEC
Sbjct: 29  NMKLSEISNQTNNNHSDDNGCTVREQDRFMPIANVIRIMRKILPPHAKISDDAKETIQEC 88

Query: 671 VSEYISFITSEANERCQCEQRKTITAEDVLWAMGKLGFDEYIAPLTLFLHRYREFEGDRG 492
           VSEYISFIT EANERCQ EQRKTITAEDVLWAM KLGFD+YI PLT++LHRYRE EG+RG
Sbjct: 89  VSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTVYLHRYREMEGERG 148

Query: 491 SIRGDPLAKR-TMEMAPLVAAAYGP-PFHVAPHQGILTPPMANGFVKDGVNMNSA 333
           SIRG+PL KR  +E  PL  AA+ P  FH   H G        G+  DG   N+A
Sbjct: 149 SIRGEPLVKRPAVEFRPLAGAAFAPAAFH--HHGGFYGVANMGGYFNDGNANNNA 201