BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006665
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   154   2e-35
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              154   2e-35
ref|XP_002515642.1| RNA binding protein, putative [Ricinus commu...   147   3e-33
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]   144   2e-32
ref|XP_002515641.1| RNA binding protein, putative [Ricinus commu...   141   1e-31

>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  154 bits (390), Expect = 2e-35
 Identities = 78/207 (37%), Positives = 126/207 (60%), Gaps = 7/207 (3%)
 Frame = +3

Query: 141  THSSPLQHIGAVQPIACRSLPFLKSSLLWGTIESMEVFKILPQEPHFGPLEQYNEDSREG 320
            T S  +   G +     +SLPF+KSS +W T+E++EVF+ +PQ+PHF PLE   E+ REG
Sbjct: 1008 TQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREG 1067

Query: 321  MAIGQMLIFASLMERTMALQLDEPRSSFENKLEVLTDIEECGFTVQPIRTRVEELLRIKD 500
            +AIG M+ F++L+E+   L+ D+PRS F + LE L ++E  GF  +P+++R+ EL+ IKD
Sbjct: 1068 LAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKD 1127

Query: 501  SYNEVDDNSKTVQRQVVEEKVKFDKLQEHIKQLDMNL-------QVLMVDKEWKSRSAAD 659
               ++   +K V+ Q++E   +  K+ E I ++D  +        + + +KE K    A 
Sbjct: 1128 QQEQLKGRTKEVENQIMEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAA 1187

Query: 660  LQRTIDAIKESIQDAISEFNSLVASPW 740
            L  ++DA+ ESIQ A  +F  +  SPW
Sbjct: 1188 LLSSVDAMNESIQSARQDFERVATSPW 1214


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  154 bits (390), Expect = 2e-35
 Identities = 78/207 (37%), Positives = 126/207 (60%), Gaps = 7/207 (3%)
 Frame = +3

Query: 141  THSSPLQHIGAVQPIACRSLPFLKSSLLWGTIESMEVFKILPQEPHFGPLEQYNEDSREG 320
            T S  +   G +     +SLPF+KSS +W T+E++EVF+ +PQ+PHF PLE   E+ REG
Sbjct: 868  TQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREG 927

Query: 321  MAIGQMLIFASLMERTMALQLDEPRSSFENKLEVLTDIEECGFTVQPIRTRVEELLRIKD 500
            +AIG M+ F++L+E+   L+ D+PRS F + LE L ++E  GF  +P+++R+ EL+ IKD
Sbjct: 928  LAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKD 987

Query: 501  SYNEVDDNSKTVQRQVVEEKVKFDKLQEHIKQLDMNL-------QVLMVDKEWKSRSAAD 659
               ++   +K V+ Q++E   +  K+ E I ++D  +        + + +KE K    A 
Sbjct: 988  QQEQLKGRTKEVENQIMEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAA 1047

Query: 660  LQRTIDAIKESIQDAISEFNSLVASPW 740
            L  ++DA+ ESIQ A  +F  +  SPW
Sbjct: 1048 LLSSVDAMNESIQSARQDFERVATSPW 1074


>ref|XP_002515642.1| RNA binding protein, putative [Ricinus communis]
            gi|223545236|gb|EEF46744.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 689

 Score =  147 bits (370), Expect = 3e-33
 Identities = 81/188 (43%), Positives = 117/188 (62%), Gaps = 7/188 (3%)
 Frame = +3

Query: 198  LPFLKSSLLWGTIESMEVFKILPQEPHFGPLEQYNEDSREGMAIGQMLIFASLMERTMAL 377
            +PFLKSSL+W  IES+EVF++LPQ+PHF PL  + E SREGMA+G ML FA L+E+   L
Sbjct: 502  MPFLKSSLIWKNIESLEVFQVLPQKPHFSPLIGHKEASREGMAMGHMLSFAVLIEKMSKL 561

Query: 378  QLDEPRSSFENKLEVLTDIEECGFTVQPIRTRVEELLRIKDSYNEVDDNSKTVQRQVVE- 554
            ++D+ R  FE+ +EVL ++E  GF V+ I  R+E+LL IKD    ++D +K V   + E 
Sbjct: 562  RVDDGREVFESYMEVLAELEMHGFEVKAIAERLEKLLSIKDRCKRLEDEAKKVHIGMAEG 621

Query: 555  --EKVK----FDKLQEHIKQLDMNLQVLMVDKEWKSRSAADLQRTIDAIKESIQDAISEF 716
              EK+K     DK++E I QL+    + +  K  K      LQ   +A+ E I +   EF
Sbjct: 622  KNEKIKLEEDIDKIEERISQLEEQRAMKVSMKMMKDSELITLQVNANAVNEDIVNMEHEF 681

Query: 717  NSLVASPW 740
             ++ A+PW
Sbjct: 682  ENVAAAPW 689


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score =  144 bits (364), Expect = 2e-32
 Identities = 75/199 (37%), Positives = 121/199 (60%), Gaps = 7/199 (3%)
 Frame = +3

Query: 141  THSSPLQHIGAVQPIACRSLPFLKSSLLWGTIESMEVFKILPQEPHFGPLEQYNEDSREG 320
            T S  +   G +     +SLPF+KSS +W T+E++EVF+ +PQ+PHF PLE   E+ REG
Sbjct: 990  TQSPRIDPTGEIMLDLNQSLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREG 1049

Query: 321  MAIGQMLIFASLMERTMALQLDEPRSSFENKLEVLTDIEECGFTVQPIRTRVEELLRIKD 500
            +AIG M+ F++L+E+   L+ D+PRS F + LE L ++E  GF  +P+++R+ EL+ IKD
Sbjct: 1050 LAIGNMVTFSTLIEKVAKLRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKD 1109

Query: 501  SYNEVDDNSKTVQRQVVEEKVKFDKLQEHIKQLDMNL-------QVLMVDKEWKSRSAAD 659
               ++   +K V+ Q++E   +  K+ E I ++D  +        + + +KE K    A 
Sbjct: 1110 QQEQLKGRTKEVENQIMEHTHEKTKIDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAA 1169

Query: 660  LQRTIDAIKESIQDAISEF 716
            L  + DA+ ESIQ A  +F
Sbjct: 1170 LLSSADAMNESIQSARQDF 1188


>ref|XP_002515641.1| RNA binding protein, putative [Ricinus communis]
            gi|223545235|gb|EEF46743.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 683

 Score =  141 bits (356), Expect = 1e-31
 Identities = 77/188 (40%), Positives = 115/188 (61%), Gaps = 7/188 (3%)
 Frame = +3

Query: 198  LPFLKSSLLWGTIESMEVFKILPQEPHFGPLEQYNEDSREGMAIGQMLIFASLMERTMAL 377
            +PF KSSL+W  IES+EVF++LPQ+PHF PL ++ E+SREGMA+G ML FA L+E+   L
Sbjct: 496  MPFFKSSLIWKNIESLEVFQVLPQKPHFSPLIRHKEESREGMAMGHMLSFAVLIEKMSKL 555

Query: 378  QLDEPRSSFENKLEVLTDIEECGFTVQPIRTRVEELLRIKDSYNEVDDNSKTVQRQVVE- 554
            Q+D+ R  F++ +EVL D+E  GF V+ I   +E+LL IKD    ++D +K V   + E 
Sbjct: 556  QVDDGREVFDSYMEVLADLEMHGFQVEAIAECLEKLLSIKDRCKRLEDEAKKVHIGMAEG 615

Query: 555  --EKVK----FDKLQEHIKQLDMNLQVLMVDKEWKSRSAADLQRTIDAIKESIQDAISEF 716
              EK+K     DK+++ I  L+    + +  K  K      LQ   +A+ E I +   EF
Sbjct: 616  KHEKIKLEEDIDKIEKRISLLEEQRAMKVSMKMMKDSELITLQVNANAVNEDIVNMEHEF 675

Query: 717  NSLVASPW 740
             ++  +PW
Sbjct: 676  ENVATAPW 683