BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006659
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320031.1| f-box family protein [Populus trichocarpa] g...   317   4e-84
ref|XP_002301149.1| predicted protein [Populus trichocarpa] gi|2...   316   6e-84
ref|XP_002285319.1| PREDICTED: F-box/kelch-repeat protein At5g43...   313   7e-83
emb|CBI19402.3| unnamed protein product [Vitis vinifera]              312   1e-82
ref|XP_003557010.1| PREDICTED: F-box/kelch-repeat protein At5g43...   302   9e-80

>ref|XP_002320031.1| f-box family protein [Populus trichocarpa]
           gi|222860804|gb|EEE98346.1| f-box family protein
           [Populus trichocarpa]
          Length = 373

 Score =  317 bits (812), Expect = 4e-84
 Identities = 159/296 (53%), Positives = 185/296 (62%), Gaps = 5/296 (1%)
 Frame = +3

Query: 75  FPLYDSIHNHWR-----MXXXXXXXXXXXXXXXXXXXXXNGXXXXXXXXXXXXXVCNLLA 239
           FPLYDSI   WR     +                     NG             VCN +A
Sbjct: 84  FPLYDSIVGSWRNLALSLSLLLPGTGSNASPSCTLLSSSNGLICFSLPSSCSLLVCNFMA 143

Query: 240 RSSRIISYPILPFAFESVTLIPTSNGYKIFVLSSGSSLNSAYVYDSRGTSWARFPGFNPI 419
           +SSRI+ +P  PF FES   +  S GYKIFVL S  S NS +VYDS+  SW +F  F PI
Sbjct: 144 KSSRIVEFPSHPFTFESFVFVSMSFGYKIFVLCSKFSSNSVFVYDSKVHSWQKFDRFEPI 203

Query: 420 LRLNLNQEGVLCNGHLFFSTPEAFSIVGFDLESGNWRDSTEELPGNGELTFARLVSNACE 599
           L  N  QEGV  NG L+F+T E FSIV FDLESG W     ELPG  ++TF RLVS+  E
Sbjct: 204 LGDNYRQEGVFFNGSLYFTTSEPFSIVCFDLESGRWGRLDNELPG--DVTFVRLVSDG-E 260

Query: 600 GKLYMXXXXXXXXXXXXMKLWGLRGGETGREWMEIGSLPEMMCKKFMSICYHNYQHVYCF 779
            KLY+            MKLW L G    R W+E+ SLPEMMCKKF+S+CYHNY+ VYCF
Sbjct: 261 KKLYLIGGVGRNGISRSMKLWELDGE---RNWIEVESLPEMMCKKFLSVCYHNYERVYCF 317

Query: 780 YHEGAICVCCYTWPEVLCYKISRQTWHWLPKCPSLPDKWSCGFKWFSFVPNLYALV 947
            HEG IC+CCYTWPE+L YK+SR+TWHWLPKCPSLP+KWSCGF+WFSFVP LYALV
Sbjct: 318 LHEGMICICCYTWPEILYYKVSRRTWHWLPKCPSLPEKWSCGFRWFSFVPELYALV 373


>ref|XP_002301149.1| predicted protein [Populus trichocarpa] gi|222842875|gb|EEE80422.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  316 bits (810), Expect = 6e-84
 Identities = 158/296 (53%), Positives = 185/296 (62%), Gaps = 5/296 (1%)
 Frame = +3

Query: 75  FPLYDSIHNHWR-----MXXXXXXXXXXXXXXXXXXXXXNGXXXXXXXXXXXXXVCNLLA 239
           FPLYDSI   WR     +                     NG             VCN LA
Sbjct: 85  FPLYDSIIGSWRHLALSLSFLLPVTGSNGSPSCSLLSSSNGLFCFSLPSSNSFLVCNFLA 144

Query: 240 RSSRIISYPILPFAFESVTLIPTSNGYKIFVLSSGSSLNSAYVYDSRGTSWARFPGFNPI 419
           +SSRI+ +P  PFAFES+  +    GYKIFVL S  S NS +VYDS+  SW +F  F PI
Sbjct: 145 KSSRIVEFPSYPFAFESLAFVSMPFGYKIFVLCSKFSSNSVFVYDSKVHSWQKFDRFEPI 204

Query: 420 LRLNLNQEGVLCNGHLFFSTPEAFSIVGFDLESGNWRDSTEELPGNGELTFARLVSNACE 599
           L  N  QEGV  NG L+F+T E FSIV FDLESG W     ELPG  +LTF RLVS+  E
Sbjct: 205 LGDNYRQEGVFFNGSLYFTTSEPFSIVCFDLESGRWERLDNELPG--DLTFVRLVSDG-E 261

Query: 600 GKLYMXXXXXXXXXXXXMKLWGLRGGETGREWMEIGSLPEMMCKKFMSICYHNYQHVYCF 779
            KLY+            MKLW L  G   R W+E+ SLPEMMCKKF+S+CYHNY+ VYCF
Sbjct: 262 NKLYLIGGVGRNGISRSMKLWELGDG---RNWIEVESLPEMMCKKFVSVCYHNYERVYCF 318

Query: 780 YHEGAICVCCYTWPEVLCYKISRQTWHWLPKCPSLPDKWSCGFKWFSFVPNLYALV 947
           +H+G IC+CCYTWPE+L  K+SR+TWHWLPKCPSLP+KWSCGF+WFSFVP LYA V
Sbjct: 319 WHQGMICICCYTWPEILYCKVSRRTWHWLPKCPSLPEKWSCGFRWFSFVPELYATV 374


>ref|XP_002285319.1| PREDICTED: F-box/kelch-repeat protein At5g43190-like [Vitis
           vinifera]
          Length = 372

 Score =  313 bits (801), Expect = 7e-83
 Identities = 156/292 (53%), Positives = 187/292 (64%), Gaps = 2/292 (0%)
 Frame = +3

Query: 78  PLYDSIHNHWR--MXXXXXXXXXXXXXXXXXXXXXNGXXXXXXXXXXXXXVCNLLARSSR 251
           PLYDS   +WR                        NG             VCNLL  SSR
Sbjct: 89  PLYDSAIGNWRNLSLTCSILLPYAATTAITLLSAANGLLCFSLPNSSSFLVCNLLVGSSR 148

Query: 252 IISYPILPFAFESVTLIPTSNGYKIFVLSSGSSLNSAYVYDSRGTSWARFPGFNPILRLN 431
           ++ +P  PFAFE +TL+P  +GYKIF+++SGSS N+A+VYDS   SW  F GF+P L  N
Sbjct: 149 VLQFPGYPFAFEMLTLVPAPDGYKIFMIASGSSSNNAWVYDSGVHSWREFQGFDPTLSDN 208

Query: 432 LNQEGVLCNGHLFFSTPEAFSIVGFDLESGNWRDSTEELPGNGELTFARLVSNACEGKLY 611
            +Q GV CNG L+F T E FSIV FDLESG W  S  ELPG  ELTF +LVS+  EGKLY
Sbjct: 209 CHQ-GVYCNGVLYFCTSEPFSIVCFDLESGVWDRSVVELPG--ELTFVKLVSDG-EGKLY 264

Query: 612 MXXXXXXXXXXXXMKLWGLRGGETGREWMEIGSLPEMMCKKFMSICYHNYQHVYCFYHEG 791
           +            MKLW L G      W+ + SLPE MC+K +S+CYHNY+HVYCF+H+ 
Sbjct: 265 LVGGIGRNGISKSMKLWELEG----ENWVLVESLPEFMCQKLVSVCYHNYEHVYCFWHQE 320

Query: 792 AICVCCYTWPEVLCYKISRQTWHWLPKCPSLPDKWSCGFKWFSFVPNLYALV 947
            ICVCCYTWPE+L YK++R+TWHWLPKCPSLPDKWSCGF+WFSFVP LYA V
Sbjct: 321 TICVCCYTWPEILYYKVARRTWHWLPKCPSLPDKWSCGFRWFSFVPELYAQV 372


>emb|CBI19402.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  312 bits (799), Expect = 1e-82
 Identities = 155/290 (53%), Positives = 186/290 (64%), Gaps = 2/290 (0%)
 Frame = +3

Query: 78   PLYDSIHNHWR--MXXXXXXXXXXXXXXXXXXXXXNGXXXXXXXXXXXXXVCNLLARSSR 251
            PLYDS   +WR                        NG             VCNLL  SSR
Sbjct: 225  PLYDSAIGNWRNLSLTCSILLPYAATTAITLLSAANGLLCFSLPNSSSFLVCNLLVGSSR 284

Query: 252  IISYPILPFAFESVTLIPTSNGYKIFVLSSGSSLNSAYVYDSRGTSWARFPGFNPILRLN 431
            ++ +P  PFAFE +TL+P  +GYKIF+++SGSS N+A+VYDS   SW  F GF+P L  N
Sbjct: 285  VLQFPGYPFAFEMLTLVPAPDGYKIFMIASGSSSNNAWVYDSGVHSWREFQGFDPTLSDN 344

Query: 432  LNQEGVLCNGHLFFSTPEAFSIVGFDLESGNWRDSTEELPGNGELTFARLVSNACEGKLY 611
             +Q GV CNG L+F T E FSIV FDLESG W  S  ELPG  ELTF +LVS+  EGKLY
Sbjct: 345  CHQ-GVYCNGVLYFCTSEPFSIVCFDLESGVWDRSVVELPG--ELTFVKLVSDG-EGKLY 400

Query: 612  MXXXXXXXXXXXXMKLWGLRGGETGREWMEIGSLPEMMCKKFMSICYHNYQHVYCFYHEG 791
            +            MKLW L G      W+ + SLPE MC+K +S+CYHNY+HVYCF+H+ 
Sbjct: 401  LVGGIGRNGISKSMKLWELEG----ENWVLVESLPEFMCQKLVSVCYHNYEHVYCFWHQE 456

Query: 792  AICVCCYTWPEVLCYKISRQTWHWLPKCPSLPDKWSCGFKWFSFVPNLYA 941
             ICVCCYTWPE+L YK++R+TWHWLPKCPSLPDKWSCGF+WFSFVP LYA
Sbjct: 457  TICVCCYTWPEILYYKVARRTWHWLPKCPSLPDKWSCGFRWFSFVPELYA 506


>ref|XP_003557010.1| PREDICTED: F-box/kelch-repeat protein At5g43190-like [Glycine max]
          Length = 359

 Score =  302 bits (774), Expect = 9e-80
 Identities = 149/292 (51%), Positives = 181/292 (61%)
 Frame = +3

Query: 72  HFPLYDSIHNHWRMXXXXXXXXXXXXXXXXXXXXXNGXXXXXXXXXXXXXVCNLLARSSR 251
           HFPLYD     WR                       G             VCNLLA+SSR
Sbjct: 72  HFPLYDCTLGTWRNFSLSLSDSFHSFPSFSTLISSGGLFCLSDSTSCSLLVCNLLAKSSR 131

Query: 252 IISYPILPFAFESVTLIPTSNGYKIFVLSSGSSLNSAYVYDSRGTSWARFPGFNPILRLN 431
            I YP      E +T + T  GY IFVL S ++ N A+VYDS+  +W RF GF P+L  N
Sbjct: 132 KIQYPSFSLHLEHLTFVTTPTGYTIFVLFSEAASNCAFVYDSKVQTWKRFRGFAPVLGDN 191

Query: 432 LNQEGVLCNGHLFFSTPEAFSIVGFDLESGNWRDSTEELPGNGELTFARLVSNACEGKLY 611
             Q+GVL NG L+F+TPE FS+V FDL+SG W     ELP +  LTF RLVS+   GKLY
Sbjct: 192 HQQQGVLFNGGLYFATPEPFSVVMFDLKSGRWERPVWELPSH-HLTFVRLVSDG-GGKLY 249

Query: 612 MXXXXXXXXXXXXMKLWGLRGGETGREWMEIGSLPEMMCKKFMSICYHNYQHVYCFYHEG 791
           +            +KLW L G   G  W+E+ SLP++MC+KF+S+CYHNY+HVYCF+HEG
Sbjct: 250 LVGGVGSNGISRSIKLWELGGD--GNYWVEVQSLPDLMCRKFVSVCYHNYEHVYCFWHEG 307

Query: 792 AICVCCYTWPEVLCYKISRQTWHWLPKCPSLPDKWSCGFKWFSFVPNLYALV 947
            IC+CCYTWPE+L Y +SR+TWHWLP+CPSLP K SCGFKWFSFVPNLYA V
Sbjct: 308 MICICCYTWPEILYYLLSRRTWHWLPRCPSLPLKCSCGFKWFSFVPNLYASV 359