BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006642
         (1898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   447   0.0  
emb|CBI15398.3| unnamed protein product [Vitis vinifera]              443   0.0  
ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ...   443   0.0  
ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|2...   443   0.0  
ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   420   0.0  

>ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1
           [Vitis vinifera]
          Length = 580

 Score =  447 bits (1149), Expect(3) = 0.0
 Identities = 227/258 (87%), Positives = 240/258 (93%)
 Frame = +3

Query: 66  GIMSTETFSQLNVGDHTMSAIQELGFQYMTQIQARSIPPLLEGKDVLGAARTGSGKTLAF 245
           GIMSTE FS L + + TM AI ++GF  MTQIQAR+IPPLL GKDVLGAARTGSGKTLAF
Sbjct: 87  GIMSTEAFSALGLSEPTMKAINDMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAF 146

Query: 246 LVPAVELLYNIQFSPRNGTGVVVICPTRELAIQTHAVAQDLLKYHTQTLGLIIGGANRRG 425
           L+PAVELLY+I F PRNGTGVVVICPTRELAIQTHAVA+DLLKYHTQTLGL+IGG+ RRG
Sbjct: 147 LIPAVELLYHISFMPRNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTLGLVIGGSARRG 206

Query: 426 EAERLVKGVNLLVATPGRFLDHLQNTKGFIYKNLKCLIVDEADRILEANFEEEMRQIIKL 605
           EAERL KG NLLVATPGR LDHLQNTKGFIYKNLKCLI+DEADRILEANFEEEM+QIIKL
Sbjct: 207 EAERLAKGANLLVATPGRLLDHLQNTKGFIYKNLKCLIIDEADRILEANFEEEMKQIIKL 266

Query: 606 LPKERQTALFSATQTKKVEDLARLSFQTTPVYIGVDDGRSKVTVEGLQQGYCVVPSAKRF 785
           LPKERQTALFSATQTKKVEDLARLSFQTTPVYI VDDGR+KVT EGLQQGYCVVPSAKRF
Sbjct: 267 LPKERQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRF 326

Query: 786 VLLYSFLKRNLSKKVMVF 839
           VLLYSFLKRNLSKKVMVF
Sbjct: 327 VLLYSFLKRNLSKKVMVF 344



 Score =  266 bits (680), Expect(3) = 0.0
 Identities = 128/136 (94%), Positives = 132/136 (97%)
 Frame = +1

Query: 868  VFFSSCNSVKYHSELLKYIQVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGL 1047
            VFFSSCNSVKYHSELL+YIQVDC DIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGL
Sbjct: 343  VFFSSCNSVKYHSELLRYIQVDCLDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGL 402

Query: 1048 DIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGHALLFLIPEELQFLRYLKAAKVPVK 1227
            DIP VDWIVQ+DPPDEPKEYIHRVGRTARGEG KG+ALLFLIPEELQFLRYLKAAKVPVK
Sbjct: 403  DIPDVDWIVQYDPPDEPKEYIHRVGRTARGEGKKGNALLFLIPEELQFLRYLKAAKVPVK 462

Query: 1228 EYEFDQKKLANVQSHL 1275
            EYE+D KKLANVQSHL
Sbjct: 463  EYEYDVKKLANVQSHL 478



 Score =  194 bits (493), Expect(3) = 0.0
 Identities = 93/108 (86%), Positives = 100/108 (92%)
 Frame = +2

Query: 1373 NVQSHLEKLVENNFYLKKSAIDAYRSYILAYNSHSMKDIFNVHRLDLQAVATSFCFSSPP 1552
            NVQSHLEKLV NN+YL KSA DAYRSYILAYNSHSMKDIFNVHRLDLQAVA+SFCFSSPP
Sbjct: 473  NVQSHLEKLVSNNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQAVASSFCFSSPP 532

Query: 1553 KVSLGLDSSASKFRKKVHKVEGRRHGINESNPYGRNRGEDDKRQFVRY 1696
            KV+L +DSSASKFRKK HKVEG R+G +ESNPYGR RG+DDKRQFVRY
Sbjct: 533  KVNLSIDSSASKFRKKTHKVEGSRNGFSESNPYGRQRGQDDKRQFVRY 580


>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  443 bits (1139), Expect(3) = 0.0
 Identities = 225/256 (87%), Positives = 238/256 (92%)
 Frame = +3

Query: 72  MSTETFSQLNVGDHTMSAIQELGFQYMTQIQARSIPPLLEGKDVLGAARTGSGKTLAFLV 251
           MSTE FS L + + TM AI ++GF  MTQIQAR+IPPLL GKDVLGAARTGSGKTLAFL+
Sbjct: 1   MSTEAFSALGLSEPTMKAINDMGFGNMTQIQARAIPPLLLGKDVLGAARTGSGKTLAFLI 60

Query: 252 PAVELLYNIQFSPRNGTGVVVICPTRELAIQTHAVAQDLLKYHTQTLGLIIGGANRRGEA 431
           PAVELLY+I F PRNGTGVVVICPTRELAIQTHAVA+DLLKYHTQTLGL+IGG+ RRGEA
Sbjct: 61  PAVELLYHISFMPRNGTGVVVICPTRELAIQTHAVAKDLLKYHTQTLGLVIGGSARRGEA 120

Query: 432 ERLVKGVNLLVATPGRFLDHLQNTKGFIYKNLKCLIVDEADRILEANFEEEMRQIIKLLP 611
           ERL KG NLLVATPGR LDHLQNTKGFIYKNLKCLI+DEADRILEANFEEEM+QIIKLLP
Sbjct: 121 ERLAKGANLLVATPGRLLDHLQNTKGFIYKNLKCLIIDEADRILEANFEEEMKQIIKLLP 180

Query: 612 KERQTALFSATQTKKVEDLARLSFQTTPVYIGVDDGRSKVTVEGLQQGYCVVPSAKRFVL 791
           KERQTALFSATQTKKVEDLARLSFQTTPVYI VDDGR+KVT EGLQQGYCVVPSAKRFVL
Sbjct: 181 KERQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRFVL 240

Query: 792 LYSFLKRNLSKKVMVF 839
           LYSFLKRNLSKKVMVF
Sbjct: 241 LYSFLKRNLSKKVMVF 256



 Score =  266 bits (680), Expect(3) = 0.0
 Identities = 128/136 (94%), Positives = 132/136 (97%)
 Frame = +1

Query: 868  VFFSSCNSVKYHSELLKYIQVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGL 1047
            VFFSSCNSVKYHSELL+YIQVDC DIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGL
Sbjct: 255  VFFSSCNSVKYHSELLRYIQVDCLDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGL 314

Query: 1048 DIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGHALLFLIPEELQFLRYLKAAKVPVK 1227
            DIP VDWIVQ+DPPDEPKEYIHRVGRTARGEG KG+ALLFLIPEELQFLRYLKAAKVPVK
Sbjct: 315  DIPDVDWIVQYDPPDEPKEYIHRVGRTARGEGKKGNALLFLIPEELQFLRYLKAAKVPVK 374

Query: 1228 EYEFDQKKLANVQSHL 1275
            EYE+D KKLANVQSHL
Sbjct: 375  EYEYDVKKLANVQSHL 390



 Score =  194 bits (493), Expect(3) = 0.0
 Identities = 93/108 (86%), Positives = 100/108 (92%)
 Frame = +2

Query: 1373 NVQSHLEKLVENNFYLKKSAIDAYRSYILAYNSHSMKDIFNVHRLDLQAVATSFCFSSPP 1552
            NVQSHLEKLV NN+YL KSA DAYRSYILAYNSHSMKDIFNVHRLDLQAVA+SFCFSSPP
Sbjct: 385  NVQSHLEKLVSNNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQAVASSFCFSSPP 444

Query: 1553 KVSLGLDSSASKFRKKVHKVEGRRHGINESNPYGRNRGEDDKRQFVRY 1696
            KV+L +DSSASKFRKK HKVEG R+G +ESNPYGR RG+DDKRQFVRY
Sbjct: 445  KVNLSIDSSASKFRKKTHKVEGSRNGFSESNPYGRQRGQDDKRQFVRY 492


>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 590

 Score =  443 bits (1139), Expect(3) = 0.0
 Identities = 220/258 (85%), Positives = 242/258 (93%)
 Frame = +3

Query: 66  GIMSTETFSQLNVGDHTMSAIQELGFQYMTQIQARSIPPLLEGKDVLGAARTGSGKTLAF 245
           GIMST++F  L + + T  AIQE+GFQY+TQIQAR+IPPLL GKDVLGAARTGSGKTLAF
Sbjct: 99  GIMSTDSFESLGLSEPTRKAIQEMGFQYLTQIQARAIPPLLVGKDVLGAARTGSGKTLAF 158

Query: 246 LVPAVELLYNIQFSPRNGTGVVVICPTRELAIQTHAVAQDLLKYHTQTLGLIIGGANRRG 425
           L+PAVELLYN+ F+PRNGTGVVVICPTRELAIQTHAVA+DLLKYH+QTLGL+IGG+ R+G
Sbjct: 159 LIPAVELLYNVHFAPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARKG 218

Query: 426 EAERLVKGVNLLVATPGRFLDHLQNTKGFIYKNLKCLIVDEADRILEANFEEEMRQIIKL 605
           EAER+VKGVNLLVATPGR LDHLQNTKGFIYKNLKCL++DEADRILEANFEEEM+QIIK+
Sbjct: 219 EAERIVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQIIKI 278

Query: 606 LPKERQTALFSATQTKKVEDLARLSFQTTPVYIGVDDGRSKVTVEGLQQGYCVVPSAKRF 785
           LPK RQTALFSATQTKKVEDLARLSFQ TPVYI VDDGR+KVT EGLQQGYCVV SAKRF
Sbjct: 279 LPKSRQTALFSATQTKKVEDLARLSFQITPVYIDVDDGRTKVTNEGLQQGYCVVHSAKRF 338

Query: 786 VLLYSFLKRNLSKKVMVF 839
           +LLYSFLKRNLSKKVMVF
Sbjct: 339 ILLYSFLKRNLSKKVMVF 356



 Score =  271 bits (692), Expect(3) = 0.0
 Identities = 129/136 (94%), Positives = 135/136 (99%)
 Frame = +1

Query: 868  VFFSSCNSVKYHSELLKYIQVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGL 1047
            VFFSSCNSVK+HSELL+YIQV+CFDIHGKQKQQKRT+TFFDFCKAEKGILLCTDVAARGL
Sbjct: 355  VFFSSCNSVKFHSELLRYIQVECFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGL 414

Query: 1048 DIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGHALLFLIPEELQFLRYLKAAKVPVK 1227
            DIPAVDWIVQ+DPPDEPKEYIHRVGRTARGEGGKG+ALLFLIPEELQFLRYLKAAKVPVK
Sbjct: 415  DIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVK 474

Query: 1228 EYEFDQKKLANVQSHL 1275
            EYEFD KKLANVQSHL
Sbjct: 475  EYEFDVKKLANVQSHL 490



 Score =  174 bits (441), Expect(3) = 0.0
 Identities = 86/108 (79%), Positives = 94/108 (87%)
 Frame = +2

Query: 1373 NVQSHLEKLVENNFYLKKSAIDAYRSYILAYNSHSMKDIFNVHRLDLQAVATSFCFSSPP 1552
            NVQSHLEKLV NN+YL KSA DAYRSYILAYNSHSMKDIFNVHRLDLQAVA SFCFS PP
Sbjct: 485  NVQSHLEKLVANNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQAVAASFCFSCPP 544

Query: 1553 KVSLGLDSSASKFRKKVHKVEGRRHGINESNPYGRNRGEDDKRQFVRY 1696
            KV+L +DS+ASKFRKK HK  G R+G +ESNPYGR R ED+ RQFVR+
Sbjct: 545  KVNLNIDSNASKFRKKAHK--GSRNGFSESNPYGRQRDEDNTRQFVRH 590


>ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|222845575|gb|EEE83122.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  443 bits (1140), Expect(3) = 0.0
 Identities = 223/258 (86%), Positives = 240/258 (93%)
 Frame = +3

Query: 66  GIMSTETFSQLNVGDHTMSAIQELGFQYMTQIQARSIPPLLEGKDVLGAARTGSGKTLAF 245
           GIMSTE+F  L + + T   IQE+GF+ +TQIQAR+IPPLL GKDVLGAARTGSGKTLAF
Sbjct: 83  GIMSTESFDSLGLSEATRKTIQEMGFENLTQIQARAIPPLLVGKDVLGAARTGSGKTLAF 142

Query: 246 LVPAVELLYNIQFSPRNGTGVVVICPTRELAIQTHAVAQDLLKYHTQTLGLIIGGANRRG 425
           L+PAVELL+N+ F+PRNGTGVVVICPTRELAIQTHAVA+DLLKYH+QTLGL+IGGA RRG
Sbjct: 143 LIPAVELLHNVHFAPRNGTGVVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGAARRG 202

Query: 426 EAERLVKGVNLLVATPGRFLDHLQNTKGFIYKNLKCLIVDEADRILEANFEEEMRQIIKL 605
           EAERLVKGVNLLVATPGR LDHLQNTKGFIYKNLKCL +DEADRILEANFEEEM+QIIKL
Sbjct: 203 EAERLVKGVNLLVATPGRLLDHLQNTKGFIYKNLKCLTIDEADRILEANFEEEMKQIIKL 262

Query: 606 LPKERQTALFSATQTKKVEDLARLSFQTTPVYIGVDDGRSKVTVEGLQQGYCVVPSAKRF 785
           LPK RQTALFSATQTKKVEDLARLSFQTTPVYI VDDGR+KVT EGLQQGYCVVPSAKRF
Sbjct: 263 LPKARQTALFSATQTKKVEDLARLSFQTTPVYIDVDDGRTKVTNEGLQQGYCVVPSAKRF 322

Query: 786 VLLYSFLKRNLSKKVMVF 839
           VLLYSF KRNLSKKVMVF
Sbjct: 323 VLLYSFFKRNLSKKVMVF 340



 Score =  268 bits (685), Expect(3) = 0.0
 Identities = 128/136 (94%), Positives = 134/136 (98%)
 Frame = +1

Query: 868  VFFSSCNSVKYHSELLKYIQVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGL 1047
            VFFSSCNSVK+H++LL+YIQV+CFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGL
Sbjct: 339  VFFSSCNSVKFHADLLRYIQVECFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGL 398

Query: 1048 DIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGHALLFLIPEELQFLRYLKAAKVPVK 1227
            DIPAVDWIVQFDPPDEPKEYIHRVGRTARGEG KG+ALLFLIPEELQFLRYLKAAKVPVK
Sbjct: 399  DIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGAKGNALLFLIPEELQFLRYLKAAKVPVK 458

Query: 1228 EYEFDQKKLANVQSHL 1275
            EYEFDQKKLANVQS L
Sbjct: 459  EYEFDQKKLANVQSQL 474



 Score =  170 bits (431), Expect(3) = 0.0
 Identities = 84/108 (77%), Positives = 92/108 (85%)
 Frame = +2

Query: 1373 NVQSHLEKLVENNFYLKKSAIDAYRSYILAYNSHSMKDIFNVHRLDLQAVATSFCFSSPP 1552
            NVQS LEKLV NN+YL KSA DAYRSY+LAYNSHSMKDIFNVHRLDLQAVA SFCFSSPP
Sbjct: 469  NVQSQLEKLVANNYYLNKSAKDAYRSYMLAYNSHSMKDIFNVHRLDLQAVAASFCFSSPP 528

Query: 1553 KVSLGLDSSASKFRKKVHKVEGRRHGINESNPYGRNRGEDDKRQFVRY 1696
            KV+L ++S+ASKFRKK HK  G R+G NESNPYGR    D+KRQF RY
Sbjct: 529  KVNLNMESNASKFRKKTHK--GSRNGFNESNPYGRQSDGDEKRQFARY 574


>ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine
           max]
          Length = 575

 Score =  420 bits (1080), Expect(3) = 0.0
 Identities = 207/261 (79%), Positives = 236/261 (90%)
 Frame = +3

Query: 57  GSFGIMSTETFSQLNVGDHTMSAIQELGFQYMTQIQARSIPPLLEGKDVLGAARTGSGKT 236
           G  GIMSTE+F  L + + T  AI ++GF +MTQIQAR+IPPLL GKDVLGAARTGSGKT
Sbjct: 82  GGSGIMSTESFESLGLSEPTYKAIMDMGFHHMTQIQARAIPPLLIGKDVLGAARTGSGKT 141

Query: 237 LAFLVPAVELLYNIQFSPRNGTGVVVICPTRELAIQTHAVAQDLLKYHTQTLGLIIGGAN 416
           LAFL+PAVELLYN++F+PRNG GV+VICPTRELAIQTHAVA++LLKYH+QTLGL+IGG+ 
Sbjct: 142 LAFLIPAVELLYNVKFTPRNGAGVIVICPTRELAIQTHAVAKELLKYHSQTLGLVIGGSA 201

Query: 417 RRGEAERLVKGVNLLVATPGRFLDHLQNTKGFIYKNLKCLIVDEADRILEANFEEEMRQI 596
           R+ EAER+ KG+NLLV TPGR LDHLQNTKGFIYKNLKCL++DEADRILEANFEEEM+QI
Sbjct: 202 RKIEAERIAKGINLLVGTPGRLLDHLQNTKGFIYKNLKCLMIDEADRILEANFEEEMKQI 261

Query: 597 IKLLPKERQTALFSATQTKKVEDLARLSFQTTPVYIGVDDGRSKVTVEGLQQGYCVVPSA 776
           IK+LPK RQTALFSATQTKKVEDLARLSFQTTP+YI VDDGR+KVT EGL QGY VVP A
Sbjct: 262 IKILPKNRQTALFSATQTKKVEDLARLSFQTTPIYIDVDDGRTKVTNEGLLQGYVVVPCA 321

Query: 777 KRFVLLYSFLKRNLSKKVMVF 839
           KRF++LYSFLKR+ SKKVMVF
Sbjct: 322 KRFIVLYSFLKRHQSKKVMVF 342



 Score =  252 bits (643), Expect(3) = 0.0
 Identities = 118/136 (86%), Positives = 130/136 (95%)
 Frame = +1

Query: 868  VFFSSCNSVKYHSELLKYIQVDCFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGL 1047
            VFFSSCNSVK+H+++L  IQ++C  IHGKQKQQ RT+TFFDFCKAEKGILLCTDVAARGL
Sbjct: 341  VFFSSCNSVKFHADILNLIQLNCSSIHGKQKQQSRTTTFFDFCKAEKGILLCTDVAARGL 400

Query: 1048 DIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGHALLFLIPEELQFLRYLKAAKVPVK 1227
            DIPAVDWIVQ+DPPDEPKEYIHRVGRTARGEGGKG+ALLFLIPEELQFLRYLKAAKVPVK
Sbjct: 401  DIPAVDWIVQYDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVK 460

Query: 1228 EYEFDQKKLANVQSHL 1275
            EY +D+KK+ANVQSHL
Sbjct: 461  EYAYDEKKVANVQSHL 476



 Score =  155 bits (391), Expect(3) = 0.0
 Identities = 78/108 (72%), Positives = 88/108 (81%)
 Frame = +2

Query: 1373 NVQSHLEKLVENNFYLKKSAIDAYRSYILAYNSHSMKDIFNVHRLDLQAVATSFCFSSPP 1552
            NVQSHLE LV NNFYL K A +AYRSYILAYNSHSMKDIFN+H LDLQAVA+SFCFS+PP
Sbjct: 471  NVQSHLENLVVNNFYLNKMAKEAYRSYILAYNSHSMKDIFNIHHLDLQAVASSFCFSNPP 530

Query: 1553 KVSLGLDSSASKFRKKVHKVEGRRHGINESNPYGRNRGEDDKRQFVRY 1696
             VSL ++S  SK R K+ KV+G RHG +  NPYG+ R  DDKRQFVRY
Sbjct: 531  NVSLNINS--SKQRNKMRKVDGSRHGFSGDNPYGK-RNADDKRQFVRY 575