BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00006640
         (1367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...   279   1e-72
ref|XP_002510979.1| DNA binding protein, putative [Ricinus commu...   275   3e-71
emb|CBI27823.3| unnamed protein product [Vitis vinifera]              263   1e-67
ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209...   260   5e-67
emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]   248   2e-63

>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score =  279 bits (714), Expect = 1e-72
 Identities = 156/307 (50%), Positives = 194/307 (63%), Gaps = 2/307 (0%)
 Frame = -1

Query: 1289 SSAATARKVRFAPKLKVRKTHKIVEPKSEVVAAADAHQIQELLSRVNEGPRRGLRLERKS 1110
            S+AA  RKVRFAPK   R+  K V PKSEV    DA Q  EL+   NE   +G     K 
Sbjct: 9    STAAATRKVRFAPKAP-RRVPKSVVPKSEVAEDDDAAQANELMRHFNEASMKGKPKAEKK 67

Query: 1109 EXXXXXXXXXXXXXXXVQVAFGQTGESTSIRTFG--RGSSSSASNIEGPVSDDGRYLLYE 936
                             QVAFG  G S SIR++G  RG+++S S  + P S  G Y    
Sbjct: 68   -------------LAPTQVAFGYGGASASIRSYGTPRGATNS-SRYQDPASGGGLYGSGL 113

Query: 935  KKKKDYAEPWDYYSYYPATLPIRRPHSGDPELLDDEEFGEASADLEYDESFISPAAELGL 756
               K+Y EPWDYY+YYP TLP+RRP+SG+PELLD+EEFGEAS    YDE+  +PA ELGL
Sbjct: 114  SDHKEYKEPWDYYTYYPVTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMELGL 173

Query: 755  TEECGQEKMLFLQLPATLPLVRRSLSVNGKEVIDSSKPFRRGAQPQKDCGLGDMPAGFMG 576
             +E  +  MLFLQLPAT+P+++++ +   KE               K C L ++P+GFMG
Sbjct: 174  MDENQEASMLFLQLPATMPMIKQAATAEVKE--------------NKTCRLEELPSGFMG 219

Query: 575  KMLVYKSGAVKLKLGEIIYDVSPGSDCVFAQNVAAINLKEKHCCDLGELDKRAVITPNVD 396
            KMLVYKSGA+KLKLG+ +YDVSPG DCVFAQ+V AIN ++K CC LGEL KRAV+TP+VD
Sbjct: 220  KMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLGELKKRAVVTPDVD 279

Query: 395  SLLKGCD 375
            S L   D
Sbjct: 280  SALSSMD 286


>ref|XP_002510979.1| DNA binding protein, putative [Ricinus communis]
            gi|223550094|gb|EEF51581.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 328

 Score =  275 bits (702), Expect = 3e-71
 Identities = 163/337 (48%), Positives = 209/337 (62%), Gaps = 31/337 (9%)
 Frame = -1

Query: 1304 MDEAASSAATARKVRFAPKLKVRKTHKIVEPKSEVVAAA----DAHQIQELLSRVNEGPR 1137
            MD+   S +  RKV+F PK   ++  +   PK+EV        +A Q Q+L+ + NE  R
Sbjct: 1    MDDEQPSPSQ-RKVKFTPKAPSQRRPRRTVPKTEVNGVDNNEDEAVQAQKLMRKFNENFR 59

Query: 1136 R-GLRLERKSEXXXXXXXXXXXXXXXVQVAFGQTG-ESTSIRTFG--RGSSSSASNIEGP 969
            R G R+E+KS                VQVAFG     STSIRTFG  +G +  +S I+  
Sbjct: 60   RQGPRVEKKST---------------VQVAFGPGATSSTSIRTFGVSKGENPVSSGIKDS 104

Query: 968  VSDDGRYLLYE----------------------KKKKDYAEPWDY-YSYYPATLPIRRPH 858
              DDG+ ++                        K KKDY EPWDY  +YYP TLP+RRP+
Sbjct: 105  TDDDGKIVISSLSTDKEDEIINCASEDIDALPLKIKKDYREPWDYDRTYYPTTLPLRRPY 164

Query: 857  SGDPELLDDEEFGEASADLEYDESFISPAAELGLTEECGQEKMLFLQLPATLPLVRRSLS 678
            SGDP LLD+ EFGEA+  LEYDES ++PA++L L EEC  EKM+F QLPA LPLV+RS S
Sbjct: 165  SGDPVLLDEAEFGEAARKLEYDESTMNPASDLELLEECDTEKMIFFQLPAKLPLVKRSAS 224

Query: 677  VNGKEVIDSSKPFRRGAQPQKDCGLGDMPAGFMGKMLVYKSGAVKLKLGEIIYDVSPGSD 498
              GKE  + S P +     +K+  L  + AG+MGKMLVY+SGAVKLKLG+ +YDVS GSD
Sbjct: 225  AKGKEKAEGSIPSQGKNAAKKESSLDGLSAGYMGKMLVYRSGAVKLKLGDTLYDVSQGSD 284

Query: 497  CVFAQNVAAINLKEKHCCDLGELDKRAVITPNVDSLL 387
            C+FAQ+V AIN   KHCC +GEL+KRAV+TP+VDSLL
Sbjct: 285  CMFAQDVMAINTAAKHCCTIGELEKRAVVTPDVDSLL 321


>emb|CBI27823.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  263 bits (671), Expect = 1e-67
 Identities = 153/309 (49%), Positives = 190/309 (61%), Gaps = 4/309 (1%)
 Frame = -1

Query: 1289 SSAATARKVRFAPKLKVRKTHKIVEPKSEVVAAADAHQIQELLSRVNEGPRRGLRLERKS 1110
            S+AA  RKVRFAPK   R+  K V PKSEV    DA Q  EL+   N        L R+ 
Sbjct: 9    STAAATRKVRFAPKAP-RRVPKSVVPKSEVAEDDDAAQANELMRHFNV-----FILWRRI 62

Query: 1109 --EXXXXXXXXXXXXXXXVQVAFGQTGESTSIRTFG--RGSSSSASNIEGPVSDDGRYLL 942
                               QVAFG  G S SIR++G  RG+++S S  + P S  G Y  
Sbjct: 63   IFYFFIFFLFCSHNCMAPTQVAFGYGGASASIRSYGTPRGATNS-SRYQDPASGGGLYGS 121

Query: 941  YEKKKKDYAEPWDYYSYYPATLPIRRPHSGDPELLDDEEFGEASADLEYDESFISPAAEL 762
                 K+Y EPWDYY+YYP TLP+RRP+SG+PELLD+EEFGEAS    YDE+  +PA EL
Sbjct: 122  GLSDHKEYKEPWDYYTYYPVTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMEL 181

Query: 761  GLTEECGQEKMLFLQLPATLPLVRRSLSVNGKEVIDSSKPFRRGAQPQKDCGLGDMPAGF 582
            GL +E  +  MLFLQLPAT+P++++                   A   + C L ++P+GF
Sbjct: 182  GLMDENQEASMLFLQLPATMPMIKQ-------------------AATAETCRLEELPSGF 222

Query: 581  MGKMLVYKSGAVKLKLGEIIYDVSPGSDCVFAQNVAAINLKEKHCCDLGELDKRAVITPN 402
            MGKMLVYKSGA+KLKLG+ +YDVSPG DCVFAQ+V AIN ++K CC LGEL KRAV+TP+
Sbjct: 223  MGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTEDKCCCVLGELKKRAVVTPD 282

Query: 401  VDSLLKGCD 375
            VDS L   D
Sbjct: 283  VDSALSSMD 291


>ref|XP_004144123.1| PREDICTED: uncharacterized protein LOC101209454 [Cucumis sativus]
            gi|449500539|ref|XP_004161125.1| PREDICTED:
            uncharacterized LOC101209454 [Cucumis sativus]
          Length = 293

 Score =  260 bits (665), Expect = 5e-67
 Identities = 146/306 (47%), Positives = 199/306 (65%), Gaps = 1/306 (0%)
 Frame = -1

Query: 1289 SSAATARKVRFAPKLKVRKTHKIVEPKSEVVAAADAHQIQELLSRVNEGPRRGL-RLERK 1113
            +  A  RK++FAPK  VR+  K  E K+EV   ADA Q ++LL R NE  +R   R+ RK
Sbjct: 8    NKTAAPRKLKFAPKAPVRRIPK-PEVKAEVAEDADAAQARDLLKRFNESTQRAKQRVGRK 66

Query: 1112 SEXXXXXXXXXXXXXXXVQVAFGQTGESTSIRTFGRGSSSSASNIEGPVSDDGRYLLYEK 933
            +                 QVAFG  G S+++R++G    S A N   P ++DG   L   
Sbjct: 67   AAP--------------TQVAFGSGGSSSTLRSYG---VSKAGN--RPRNEDGT--LPAS 105

Query: 932  KKKDYAEPWDYYSYYPATLPIRRPHSGDPELLDDEEFGEASADLEYDESFISPAAELGLT 753
              K+Y EPWDYYSYYP TLP+RRP+SG+P+ L++EEFGEAS +L YDE+  + A  LGL 
Sbjct: 106  TSKEYVEPWDYYSYYPVTLPLRRPYSGNPDSLNEEEFGEASENLTYDENTTTAAMNLGLL 165

Query: 752  EECGQEKMLFLQLPATLPLVRRSLSVNGKEVIDSSKPFRRGAQPQKDCGLGDMPAGFMGK 573
            EE  +  +LFLQLP  +P++++S SV      +SS+  +     QK C + ++P+G +GK
Sbjct: 166  EENPEADVLFLQLPPMVPMIKQSSSVEDMGSGNSSEQNKASQPRQKTCSMNELPSGSIGK 225

Query: 572  MLVYKSGAVKLKLGEIIYDVSPGSDCVFAQNVAAINLKEKHCCDLGELDKRAVITPNVDS 393
            +LVY+SGAVKLKLG+IIYDVS G DC FAQ VAAIN++ K CC +GEL KRA++TP+VDS
Sbjct: 226  LLVYRSGAVKLKLGDIIYDVSSGMDCGFAQEVAAINVEGKRCCIVGELSKRAILTPDVDS 285

Query: 392  LLKGCD 375
            +LK  +
Sbjct: 286  MLKNIE 291


>emb|CAN67263.1| hypothetical protein VITISV_022611 [Vitis vinifera]
          Length = 348

 Score =  248 bits (634), Expect = 2e-63
 Identities = 160/361 (44%), Positives = 199/361 (55%), Gaps = 55/361 (15%)
 Frame = -1

Query: 1304 MDEAASSAATARKVRFAPKLKVRKTHKIVEPKSEVVAAAD-AHQIQELLSRVNEGPRR-G 1131
            MD   SS+ + RKVRFAPK   R+  K   P+  V    D A + Q LL RVNE  RR G
Sbjct: 1    MDHNESSSVSPRKVRFAPKSPPRRKPKTTAPQPVVAEEEDEAKRAQYLLRRVNEKLRRQG 60

Query: 1130 LRLERKSEXXXXXXXXXXXXXXXVQVAFGQTGESTS--IRTFG---RGSSSSASNIEGPV 966
             ++E+ S                VQV FG    + S  IRTFG    G+S  +S +E  V
Sbjct: 61   PKVEKTSS---------------VQVVFGPGAATPSDTIRTFGVHRDGNSDKSSGMELKV 105

Query: 965  S----------------------------DDGRYLLYEKKKKDYAEPWDY-YSYYPATLP 873
            S                            DD   +     +K Y EPWDY +SYYP TLP
Sbjct: 106  STPDHEEIAVSSXSTTKPDETNGXFADATDDSAQI-----RKRYKEPWDYVHSYYPTTLP 160

Query: 872  IRRPHSGDPELLDDEEFGEASADLEYDESFISPAAELGLTEECGQEKMLFLQLPATLPLV 693
            +R+PHSGDPE+LD+ EFGEAS +LEYDE  I+PA+ELGL EE  + +M   QLPA LPLV
Sbjct: 161  LRKPHSGDPEILDEAEFGEASTNLEYDEKTINPASELGLLEESEKGRMFLFQLPANLPLV 220

Query: 692  RRSLSVNGKEVIDSSKPFR------RGAQ-------------PQKDCGLGDMPAGFMGKM 570
            ++S S  GKE++ +S          +G Q              +  C L D+  G  GKM
Sbjct: 221  KQSASAKGKEIVGNSTSLEGIYASAKGKQVARSSLSSKSIGTSEHSCRLEDLAGGHXGKM 280

Query: 569  LVYKSGAVKLKLGEIIYDVSPGSDCVFAQNVAAINLKEKHCCDLGELDKRAVITPNVDSL 390
            LVYKSGA+KLKLGEI+YDVSPG DC   Q+V AIN  +KHC  LGEL KR ++TP+VDSL
Sbjct: 281  LVYKSGAIKLKLGEILYDVSPGLDCTCVQDVVAINTVDKHCYALGELGKRVIVTPDVDSL 340

Query: 389  L 387
            L
Sbjct: 341  L 341